RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 RTFDC1Q9BY42 306 aaPredicted RBP25.2■■□□□ 1.62
SSRP1-204ENST00000529002 ANKRD36CQ5JPF3 1778 aa25.19■■□□□ 1.62
SSRP1-204ENST00000529002 YDJCA8MPS7 323 aa25.19■■□□□ 1.62
SSRP1-204ENST00000529002 HUNKP57058 714 aa25.19■■□□□ 1.62
SSRP1-204ENST00000529002 DPP8Q6V1X1 898 aaPredicted RBP25.19■■□□□ 1.62
SSRP1-204ENST00000529002 CDC37L1Q7L3B6 337 aa25.19■■□□□ 1.62
SSRP1-204ENST00000529002 PPP1R42Q7Z4L9 355 aa25.19■■□□□ 1.62
SSRP1-204ENST00000529002 TMX4Q9H1E5 349 aaPredicted RBP25.19■■□□□ 1.62
SSRP1-204ENST00000529002 CNOT7Q9UIV1 285 aaKnown RBP25.19■■□□□ 1.62
SSRP1-204ENST00000529002 SOX10P56693 466 aa25.18■■□□□ 1.62
SSRP1-204ENST00000529002 KIAA2012Q0VF49 1180 aa25.18■■□□□ 1.62
SSRP1-204ENST00000529002 MPNDQ8N594 471 aa25.18■■□□□ 1.62
SSRP1-204ENST00000529002 SUPT20HQ8NEM7 779 aa25.18■■□□□ 1.62
SSRP1-204ENST00000529002 ZNF428Q96B54 188 aa25.18■■□□□ 1.62
SSRP1-204ENST00000529002 VPS33BQ9H267 617 aa25.18■■□□□ 1.62
SSRP1-204ENST00000529002 AKAP11Q9UKA4 1901 aa25.18■■□□□ 1.62
SSRP1-204ENST00000529002 ANXA1P04083 346 aa25.17■■□□□ 1.62
SSRP1-204ENST00000529002 NOGQ13253 232 aa25.17■■□□□ 1.62
SSRP1-204ENST00000529002 SLC10A5Q5PT55 438 aa25.17■■□□□ 1.62
SSRP1-204ENST00000529002 ZC3H15Q8WU90 426 aaKnown RBP25.17■■□□□ 1.62
SSRP1-204ENST00000529002 ZBTB12Q9Y330 459 aaPredicted RBP25.17■■□□□ 1.62
SSRP1-204ENST00000529002 HCLS1P14317 486 aaPredicted RBP25.16■■□□□ 1.62
SSRP1-204ENST00000529002 SAMD7Q7Z3H4 446 aa25.16■■□□□ 1.62
SSRP1-204ENST00000529002 SP8Q8IXZ3 490 aa25.16■■□□□ 1.62
SSRP1-204ENST00000529002 MICALL2Q8IY33 904 aa25.16■■□□□ 1.62
SSRP1-204ENST00000529002 UTP14AQ9BVJ6 771 aaKnown RBP25.16■■□□□ 1.62
SSRP1-204ENST00000529002 DUOX1Q9NRD9 1551 aa25.16■■□□□ 1.62
SSRP1-204ENST00000529002 PROSER3Q2NL68 480 aa25.15■■□□□ 1.62
SSRP1-204ENST00000529002 PARP10Q53GL7 1025 aa25.15■■□□□ 1.62
SSRP1-204ENST00000529002 FAM155AB1AL88 458 aaPredicted RBP25.14■■□□□ 1.62
SSRP1-204ENST00000529002 EGFRP00533 1210 aa25.14■■□□□ 1.62
SSRP1-204ENST00000529002 TNIP1Q15025 636 aa25.14■■□□□ 1.62
SSRP1-204ENST00000529002 LRP10Q7Z4F1 713 aa25.14■■□□□ 1.62
SSRP1-204ENST00000529002 PNISRQ8TF01 805 aaKnown RBP25.14■■□□□ 1.62
SSRP1-204ENST00000529002 CDHR2Q9BYE9 1310 aa25.13■■□□□ 1.61
SSRP1-204ENST00000529002 PDIA6Q15084 440 aa25.13■■□□□ 1.61
SSRP1-204ENST00000529002 H7C1D1 291 aa25.12■■□□□ 1.61
SSRP1-204ENST00000529002 BBOX1O75936 387 aa25.12■■□□□ 1.61
SSRP1-204ENST00000529002 EIF2S2P20042 333 aaKnown RBP25.12■■□□□ 1.61
SSRP1-204ENST00000529002 TBC1D10BQ4KMP7 808 aaPredicted RBP25.12■■□□□ 1.61
SSRP1-204ENST00000529002 ADM5C9JUS6 153 aa25.11■■□□□ 1.61
SSRP1-204ENST00000529002 KIF23Q02241 960 aaPredicted RBP25.11■■□□□ 1.61
SSRP1-204ENST00000529002 RGMBQ6NW40 437 aa25.11■■□□□ 1.61
SSRP1-204ENST00000529002 PSMD14O00487 310 aa25.1■■□□□ 1.61
SSRP1-204ENST00000529002 TRPA1O75762 1119 aa25.1■■□□□ 1.61
SSRP1-204ENST00000529002 RBM26Q5T8P6 1007 aaKnown RBP25.1■■□□□ 1.61
SSRP1-204ENST00000529002 KRT26Q7Z3Y9 468 aa25.09■■□□□ 1.61
SSRP1-204ENST00000529002 DBNDD1Q9H9R9 158 aa25.09■■□□□ 1.61
SSRP1-204ENST00000529002 GBA2Q9HCG7 927 aaPredicted RBP25.09■■□□□ 1.61
SSRP1-204ENST00000529002 KCNQ5Q9NR82 932 aa25.09■■□□□ 1.61
SSRP1-204ENST00000529002 RNF186Q9NXI6 227 aa25.09■■□□□ 1.61
SSRP1-204ENST00000529002 COL4A1P02462 1669 aa25.09■■□□□ 1.61
SSRP1-204ENST00000529002 LRRC37AA6NMS7 1700 aa25.09■■□□□ 1.61
SSRP1-204ENST00000529002 GRAPQ13588 217 aa25.08■■□□□ 1.61
SSRP1-204ENST00000529002 DDX46Q7L014 1031 aaKnown RBP25.08■■□□□ 1.61
SSRP1-204ENST00000529002 NLRP10Q86W26 655 aa25.08■■□□□ 1.61
SSRP1-204ENST00000529002 GRAPLQ8TC17 118 aaPredicted RBP25.08■■□□□ 1.61
SSRP1-204ENST00000529002 NECTIN2Q92692 538 aa25.08■■□□□ 1.61
SSRP1-204ENST00000529002 DDX60Q8IY21 1712 aaKnown RBP25.07■■□□□ 1.6
SSRP1-204ENST00000529002 RIMBP2O15034 1052 aa25.07■■□□□ 1.6
SSRP1-204ENST00000529002 PLEKHF1Q96S99 279 aa25.07■■□□□ 1.6
SSRP1-204ENST00000529002 SCN9AQ15858 1988 aa25.07■■□□□ 1.6
SSRP1-204ENST00000529002 ERBB4Q15303 1308 aa25.07■■□□□ 1.6
SSRP1-204ENST00000529002 ZNF157P51786 506 aaPredicted RBP25.06■■□□□ 1.6
SSRP1-204ENST00000529002 AIMP1Q12904 312 aaKnown RBP25.06■■□□□ 1.6
SSRP1-204ENST00000529002 NFE2L2Q16236 605 aa25.06■■□□□ 1.6
SSRP1-204ENST00000529002 TRMT112Q9UI30 125 aaKnown RBP25.05■■□□□ 1.6
SSRP1-204ENST00000529002 ASTN2O75129 1339 aaPredicted RBP25.05■■□□□ 1.6
SSRP1-204ENST00000529002 COPS6Q7L5N1 327 aa25.04■■□□□ 1.6
SSRP1-204ENST00000529002 C2orf69Q8N8R5 385 aa25.04■■□□□ 1.6
SSRP1-204ENST00000529002 DPF2Q92785 391 aa25.04■■□□□ 1.6
SSRP1-204ENST00000529002 NEFMP07197 916 aa25.03■■□□□ 1.6
SSRP1-204ENST00000529002 DOK7Q18PE1 504 aa25.03■■□□□ 1.6
SSRP1-204ENST00000529002 XAGE3Q8WTP9 111 aa25.03■■□□□ 1.6
SSRP1-204ENST00000529002 CSRNP1Q96S65 589 aa25.03■■□□□ 1.6
SSRP1-204ENST00000529002 SAGE1Q9NXZ1 904 aa25.03■■□□□ 1.6
SSRP1-204ENST00000529002 TSPYL4Q9UJ04 414 aa25.03■■□□□ 1.6
SSRP1-204ENST00000529002 RTL9Q8NET4 1388 aa25.03■■□□□ 1.6
SSRP1-204ENST00000529002 WASHC4Q2M389 1173 aa25.02■■□□□ 1.6
SSRP1-204ENST00000529002 CELF1Q92879 486 aaKnown RBP25.02■■□□□ 1.6
SSRP1-204ENST00000529002 CCDC102AQ96A19 550 aa25.02■■□□□ 1.6
SSRP1-204ENST00000529002 DCPSQ96C86 337 aaKnown RBP25.02■■□□□ 1.6
SSRP1-204ENST00000529002 NSFL1CQ9UNZ2 370 aaKnown RBP25.02■■□□□ 1.6
SSRP1-204ENST00000529002 POLLQ9UGP5 575 aa25.01■■□□□ 1.59
SSRP1-204ENST00000529002 SH3TC1Q8TE82 1336 aa25.01■■□□□ 1.59
SSRP1-204ENST00000529002 SLC10A3P09131 477 aa25■■□□□ 1.59
SSRP1-204ENST00000529002 TCIRG1Q13488 830 aa25■■□□□ 1.59
SSRP1-204ENST00000529002 C6orf229H3BNL8 230 aa24.99■■□□□ 1.59
SSRP1-204ENST00000529002 ECE2O60344 883 aa24.99■■□□□ 1.59
SSRP1-204ENST00000529002 GPSM2P81274 684 aa24.99■■□□□ 1.59
SSRP1-204ENST00000529002 KIF4BQ2VIQ3 1234 aa24.98■■□□□ 1.59
SSRP1-204ENST00000529002 GGA3Q9NZ52 723 aa24.98■■□□□ 1.59
SSRP1-204ENST00000529002 HSP90AB3PQ58FF7 597 aa24.97■■□□□ 1.59
SSRP1-204ENST00000529002 CTU1Q7Z7A3 348 aaKnown RBP24.97■■□□□ 1.59
SSRP1-204ENST00000529002 KRT24Q2M2I5 525 aa24.96■■□□□ 1.59
SSRP1-204ENST00000529002 CDCA5Q96FF9 252 aa24.96■■□□□ 1.59
SSRP1-204ENST00000529002 RTL5Q5HYW3 569 aaPredicted RBP24.95■■□□□ 1.58
SSRP1-204ENST00000529002 PRPF38BQ5VTL8 546 aaKnown RBP24.95■■□□□ 1.58
SSRP1-204ENST00000529002 TMC4Q7Z404 712 aa24.95■■□□□ 1.58
SSRP1-204ENST00000529002 RASAL3Q86YV0 1011 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms