RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 MAP7D2Q96T17 732 aa9.96□□□□□ -0.82
CSTF3-208ENST00000528865 HAUS7Q99871 368 aa9.96□□□□□ -0.82
CSTF3-208ENST00000528865 GPR108Q9NPR9 543 aa9.96□□□□□ -0.82
CSTF3-208ENST00000528865 SPTLC3Q9NUV7 552 aa9.96□□□□□ -0.82
CSTF3-208ENST00000528865 DBNLQ9UJU6 430 aaKnown RBP9.96□□□□□ -0.82
CSTF3-208ENST00000528865 USP16Q9Y5T5 823 aa9.96□□□□□ -0.82
CSTF3-208ENST00000528865 U3KPZ7 1027 aaPredicted RBP9.96□□□□□ -0.82
CSTF3-208ENST00000528865 COL18A1P39060 1754 aa9.96□□□□□ -0.82
CSTF3-208ENST00000528865 H7C1W4 665 aa9.95□□□□□ -0.82
CSTF3-208ENST00000528865 DYNC1I1O14576 645 aa9.95□□□□□ -0.82
CSTF3-208ENST00000528865 PTMAP06454 111 aaKnown RBP9.95□□□□□ -0.82
CSTF3-208ENST00000528865 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
CSTF3-208ENST00000528865 GIMAP6Q6P9H5 292 aa9.95□□□□□ -0.82
CSTF3-208ENST00000528865 ZNF589Q86UQ0 364 aaPredicted RBP9.95□□□□□ -0.82
CSTF3-208ENST00000528865 PROSER2Q86WR7 435 aaPredicted RBP9.95□□□□□ -0.82
CSTF3-208ENST00000528865 PLBD2Q8NHP8 589 aa9.95□□□□□ -0.82
CSTF3-208ENST00000528865 FMNL2Q96PY5 1086 aa9.95□□□□□ -0.82
CSTF3-208ENST00000528865 LLPHQ9BRT6 129 aaKnown RBP9.95□□□□□ -0.82
CSTF3-208ENST00000528865 SCAND2PQ9GZW5 306 aaPredicted RBP9.95□□□□□ -0.82
CSTF3-208ENST00000528865 USP25Q9UHP3 1055 aa9.95□□□□□ -0.82
CSTF3-208ENST00000528865 ADAMTSL3P82987 1691 aa9.95□□□□□ -0.82
CSTF3-208ENST00000528865 ALS2Q96Q42 1657 aa9.95□□□□□ -0.82
CSTF3-208ENST00000528865 CCDC192P0DO97 292 aa9.94□□□□□ -0.82
CSTF3-208ENST00000528865 MYL6BP14649 208 aa9.94□□□□□ -0.82
CSTF3-208ENST00000528865 TFCP2Q12800 502 aa9.94□□□□□ -0.82
CSTF3-208ENST00000528865 NOLC1Q14978 699 aaKnown RBP eCLIP9.94□□□□□ -0.82
CSTF3-208ENST00000528865 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
CSTF3-208ENST00000528865 CDC37L1Q7L3B6 337 aa9.94□□□□□ -0.82
CSTF3-208ENST00000528865 SMARCC2Q8TAQ2 1214 aa9.94□□□□□ -0.82
CSTF3-208ENST00000528865 KLHDC4Q8TBB5 520 aa9.94□□□□□ -0.82
CSTF3-208ENST00000528865 DDX54Q8TDD1 881 aaKnown RBP9.94□□□□□ -0.82
CSTF3-208ENST00000528865 GTF3C6Q969F1 213 aa9.94□□□□□ -0.82
CSTF3-208ENST00000528865 NEK1Q96PY6 1258 aa9.94□□□□□ -0.82
CSTF3-208ENST00000528865 HELLSQ9NRZ9 838 aa9.94□□□□□ -0.82
CSTF3-208ENST00000528865 TAF6LQ9Y6J9 622 aa9.94□□□□□ -0.82
CSTF3-208ENST00000528865 C5P01031 1676 aa9.93□□□□□ -0.82
CSTF3-208ENST00000528865 SH3TC1Q8TE82 1336 aa9.93□□□□□ -0.82
CSTF3-208ENST00000528865 VPS37CA5D8V6 355 aaPredicted RBP9.93□□□□□ -0.82
CSTF3-208ENST00000528865 CYP27B1O15528 508 aa9.93□□□□□ -0.82
CSTF3-208ENST00000528865 AP5Z1O43299 807 aa9.93□□□□□ -0.82
CSTF3-208ENST00000528865 ZC3H6P61129 1189 aaKnown RBP9.93□□□□□ -0.82
CSTF3-208ENST00000528865 FOXO4P98177 505 aa9.93□□□□□ -0.82
CSTF3-208ENST00000528865 RESTQ13127 1097 aa9.93□□□□□ -0.82
CSTF3-208ENST00000528865 MAP3K11Q16584 847 aa9.93□□□□□ -0.82
CSTF3-208ENST00000528865 LMOD2Q6P5Q4 547 aa9.93□□□□□ -0.82
CSTF3-208ENST00000528865 FAM200AQ8TCP9 573 aa9.93□□□□□ -0.82
CSTF3-208ENST00000528865 SIL1Q9H173 461 aa9.93□□□□□ -0.82
CSTF3-208ENST00000528865 ZSCAN16Q9H4T2 348 aaPredicted RBP9.93□□□□□ -0.82
CSTF3-208ENST00000528865 DDX19AQ9NUU7 478 aaKnown RBP9.93□□□□□ -0.82
CSTF3-208ENST00000528865 NLRP2Q9NX02 1062 aa9.93□□□□□ -0.82
CSTF3-208ENST00000528865 MEGF6O75095 1541 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 UQCRHLA0A096LP55 91 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 PFKFB2O60825 505 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 UQCRHP07919 91 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 HMGB1P09429 215 aaKnown RBP9.92□□□□□ -0.82
CSTF3-208ENST00000528865 LIG1P18858 919 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 EXOSC10Q01780 885 aaKnown RBP9.92□□□□□ -0.82
CSTF3-208ENST00000528865 GLIPR1L2Q4G1C9 344 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 MTERF4Q7Z6M4 381 aaKnown RBP9.92□□□□□ -0.82
CSTF3-208ENST00000528865 FBXL16Q8N461 479 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 KBTBD3Q8NAB2 608 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 MYRIPQ8NFW9 859 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 KIAA1524Q8TCG1 905 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.92□□□□□ -0.82
CSTF3-208ENST00000528865 LEO1Q8WVC0 666 aaPredicted RBP9.92□□□□□ -0.82
CSTF3-208ENST00000528865 EDC3Q96F86 508 aaKnown RBP9.92□□□□□ -0.82
CSTF3-208ENST00000528865 PRIMPOLQ96LW4 560 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 DBNDD2Q9BQY9 259 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 DSCC1Q9BVC3 393 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 AGXT2Q9BYV1 514 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 NUP62CLQ9H1M0 184 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 CLSTN2Q9H4D0 955 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 ATG3Q9NT62 314 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 MRVI1Q9Y6F6 885 aa9.92□□□□□ -0.82
CSTF3-208ENST00000528865 ZNF609O15014 1411 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 RGPD5Q99666 1765 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 CPDO75976 1380 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 PALLDQ8WX93 1383 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 A0A087WZG4 1122 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 CAVIN2O95810 425 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 CYP21A2P08686 494 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 GTF2F1P35269 517 aaKnown RBP eCLIP9.91□□□□□ -0.82
CSTF3-208ENST00000528865 HMGN5P82970 282 aaKnown RBP9.91□□□□□ -0.82
CSTF3-208ENST00000528865 TYRO3Q06418 890 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 ZMYM1Q5SVZ6 1142 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 ATL3Q6DD88 541 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 NAA16Q6N069 864 aaPredicted RBP9.91□□□□□ -0.82
CSTF3-208ENST00000528865 Q6ZUG5 572 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 DHX32Q7L7V1 743 aaKnown RBP9.91□□□□□ -0.82
CSTF3-208ENST00000528865 ATG9AQ7Z3C6 839 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 TTC5Q8N0Z6 440 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 CHMP4CQ96CF2 233 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 PGBD1Q96JS3 809 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 SPATA32Q96LK8 384 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 RCOR1Q9UKL0 485 aa9.91□□□□□ -0.82
CSTF3-208ENST00000528865 GOLGA6L6A8MZA4 724 aa9.9□□□□□ -0.82
CSTF3-208ENST00000528865 NBPF26B4DH59 902 aa9.9□□□□□ -0.82
CSTF3-208ENST00000528865 CIAO1O76071 339 aa9.9□□□□□ -0.82
CSTF3-208ENST00000528865 ADD1P35611 737 aaKnown RBP9.9□□□□□ -0.82
CSTF3-208ENST00000528865 IL15P40933 162 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms