RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 RPS6KB1P23443 525 aa12.54□□□□□ -0.4
AP002008.3-201ENST00000528614 LARP1BQ659C4 914 aaKnown RBP12.54□□□□□ -0.4
AP002008.3-201ENST00000528614 CCDC39Q9UFE4 941 aa12.54□□□□□ -0.4
AP002008.3-201ENST00000528614 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
AP002008.3-201ENST00000528614 COL18A1P39060 1754 aa12.53□□□□□ -0.4
AP002008.3-201ENST00000528614 OFD1O75665 1012 aa12.53□□□□□ -0.4
AP002008.3-201ENST00000528614 ANKRD1Q15327 319 aa12.53□□□□□ -0.4
AP002008.3-201ENST00000528614 CSPP1Q1MSJ5 1256 aa12.53□□□□□ -0.4
AP002008.3-201ENST00000528614 PLBD2Q8NHP8 589 aa12.53□□□□□ -0.4
AP002008.3-201ENST00000528614 ALDH8A1Q9H2A2 487 aaPredicted RBP12.53□□□□□ -0.4
AP002008.3-201ENST00000528614 CASP7P55210 303 aa12.53□□□□□ -0.4
AP002008.3-201ENST00000528614 TSGA10IPQ3SY00 556 aa12.53□□□□□ -0.4
AP002008.3-201ENST00000528614 DBNDD2Q9BQY9 259 aa12.53□□□□□ -0.4
AP002008.3-201ENST00000528614 ZKSCAN5Q9Y2L8 839 aa12.53□□□□□ -0.4
AP002008.3-201ENST00000528614 ZNF500O60304 480 aaPredicted RBP12.52□□□□□ -0.4
AP002008.3-201ENST00000528614 TOB2Q14106 344 aaPredicted RBP12.52□□□□□ -0.4
AP002008.3-201ENST00000528614 UVSSAQ2YD98 709 aa12.52□□□□□ -0.4
AP002008.3-201ENST00000528614 DNAJC2Q99543 621 aaKnown RBP12.52□□□□□ -0.4
AP002008.3-201ENST00000528614 HMG20BQ9P0W2 317 aa12.52□□□□□ -0.4
AP002008.3-201ENST00000528614 JCADQ9P266 1359 aa12.52□□□□□ -0.41
AP002008.3-201ENST00000528614 CHGBP05060 677 aa12.52□□□□□ -0.41
AP002008.3-201ENST00000528614 USPL1Q5W0Q7 1092 aa12.52□□□□□ -0.41
AP002008.3-201ENST00000528614 LMBR1LQ6UX01 489 aa12.52□□□□□ -0.41
AP002008.3-201ENST00000528614 FAM184AQ8NB25 1140 aa12.52□□□□□ -0.41
AP002008.3-201ENST00000528614 COL15A1P39059 1388 aa12.52□□□□□ -0.41
AP002008.3-201ENST00000528614 PDIA4P13667 645 aaKnown RBP12.51□□□□□ -0.41
AP002008.3-201ENST00000528614 CCDC129Q6ZRS4 1044 aa12.51□□□□□ -0.41
AP002008.3-201ENST00000528614 NBPF26B4DH59 902 aa12.51□□□□□ -0.41
AP002008.3-201ENST00000528614 NBPF14Q5TI25 921 aa12.51□□□□□ -0.41
AP002008.3-201ENST00000528614 NBPF10Q6P3W6 841 aaKnown RBP12.51□□□□□ -0.41
AP002008.3-201ENST00000528614 NBPF15Q8N660 670 aa12.51□□□□□ -0.41
AP002008.3-201ENST00000528614 SEC62Q99442 399 aaKnown RBP12.51□□□□□ -0.41
AP002008.3-201ENST00000528614 HAUS7Q99871 368 aa12.51□□□□□ -0.41
AP002008.3-201ENST00000528614 CHMP3Q9Y3E7 222 aa12.51□□□□□ -0.41
AP002008.3-201ENST00000528614 H7C1W4 665 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 MCM5P33992 734 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 FOXO4P98177 505 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 STK3Q13188 491 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 GIMAP6Q6P9H5 292 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 CDC37L1Q7L3B6 337 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 FERMT3Q86UX7 667 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 CCDC9Q9Y3X0 531 aaKnown RBP12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 SPATA31A3Q5VYP0 1347 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 TNS3Q68CZ2 1445 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 ABCC6O95255 1503 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 PTMAP06454 111 aaKnown RBP12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 HCLS1P14317 486 aaPredicted RBP12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 PDCP20941 246 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 TTLL7Q6ZT98 887 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 CADPS2Q86UW7 1296 aa12.5□□□□□ -0.41
AP002008.3-201ENST00000528614 PLEKHG2Q9H7P9 1386 aa12.49□□□□□ -0.41
AP002008.3-201ENST00000528614 KRT32Q14532 448 aa12.49□□□□□ -0.41
AP002008.3-201ENST00000528614 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
AP002008.3-201ENST00000528614 FAM173BQ6P4H8 233 aa12.49□□□□□ -0.41
AP002008.3-201ENST00000528614 DDX46Q7L014 1031 aaKnown RBP12.49□□□□□ -0.41
AP002008.3-201ENST00000528614 NEK1Q96PY6 1258 aa12.49□□□□□ -0.41
AP002008.3-201ENST00000528614 ZNF609O15014 1411 aa12.49□□□□□ -0.41
AP002008.3-201ENST00000528614 TTC6Q86TZ1 520 aa12.49□□□□□ -0.41
AP002008.3-201ENST00000528614 NEUROD6Q96NK8 337 aa12.49□□□□□ -0.41
AP002008.3-201ENST00000528614 FUCA2Q9BTY2 467 aa12.49□□□□□ -0.41
AP002008.3-201ENST00000528614 USP25Q9UHP3 1055 aa12.49□□□□□ -0.41
AP002008.3-201ENST00000528614 A1BGP04217 495 aa12.48□□□□□ -0.41
AP002008.3-201ENST00000528614 TPM2P07951 284 aa12.48□□□□□ -0.41
AP002008.3-201ENST00000528614 KRT85P78386 507 aa12.48□□□□□ -0.41
AP002008.3-201ENST00000528614 ZCRB1Q8TBF4 217 aaKnown RBP12.48□□□□□ -0.41
AP002008.3-201ENST00000528614 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
AP002008.3-201ENST00000528614 AFDNP55196 1824 aaKnown RBP12.48□□□□□ -0.41
AP002008.3-201ENST00000528614 DCCP43146 1447 aa12.48□□□□□ -0.41
AP002008.3-201ENST00000528614 ATG9AQ7Z3C6 839 aa12.48□□□□□ -0.41
AP002008.3-201ENST00000528614 CPDO75976 1380 aa12.47□□□□□ -0.41
AP002008.3-201ENST00000528614 ARFGEF2Q9Y6D5 1785 aa12.47□□□□□ -0.41
AP002008.3-201ENST00000528614 CYP21A2P08686 494 aa12.47□□□□□ -0.41
AP002008.3-201ENST00000528614 TIMM10P62072 90 aa12.47□□□□□ -0.41
AP002008.3-201ENST00000528614 Q6ZUG5 572 aa12.47□□□□□ -0.41
AP002008.3-201ENST00000528614 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
AP002008.3-201ENST00000528614 CWC25Q9NXE8 425 aaPredicted RBP12.47□□□□□ -0.41
AP002008.3-201ENST00000528614 RFX7Q2KHR2 1363 aa12.47□□□□□ -0.41
AP002008.3-201ENST00000528614 PKD1L3Q7Z443 1732 aa12.47□□□□□ -0.41
AP002008.3-201ENST00000528614 BCL11BQ9C0K0 894 aaPredicted RBP12.47□□□□□ -0.41
AP002008.3-201ENST00000528614 R3HCC1Q9Y3T6 440 aaKnown RBP12.47□□□□□ -0.41
AP002008.3-201ENST00000528614 ADCY5O95622 1261 aa12.46□□□□□ -0.41
AP002008.3-201ENST00000528614 SLFNL1Q499Z3 407 aa12.46□□□□□ -0.41
AP002008.3-201ENST00000528614 TOM1L2Q6ZVM7 507 aa12.46□□□□□ -0.41
AP002008.3-201ENST00000528614 MPNDQ8N594 471 aa12.46□□□□□ -0.41
AP002008.3-201ENST00000528614 TFIP11Q9UBB9 837 aaKnown RBP12.46□□□□□ -0.41
AP002008.3-201ENST00000528614 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.46□□□□□ -0.41
AP002008.3-201ENST00000528614 ERVV-2B6SEH9 535 aa12.46□□□□□ -0.42
AP002008.3-201ENST00000528614 GOLIM4O00461 696 aa12.46□□□□□ -0.42
AP002008.3-201ENST00000528614 JAK2O60674 1132 aa12.46□□□□□ -0.42
AP002008.3-201ENST00000528614 KDM4AO75164 1064 aa12.46□□□□□ -0.42
AP002008.3-201ENST00000528614 HSP90AA2PQ14568 343 aaPredicted RBP12.46□□□□□ -0.42
AP002008.3-201ENST00000528614 KLHL34Q8N239 644 aa12.46□□□□□ -0.42
AP002008.3-201ENST00000528614 GTF3C6Q969F1 213 aa12.46□□□□□ -0.42
AP002008.3-201ENST00000528614 ZBTB3Q9H5J0 574 aa12.46□□□□□ -0.42
AP002008.3-201ENST00000528614 PAG1Q9NWQ8 432 aa12.46□□□□□ -0.42
AP002008.3-201ENST00000528614 STRCP1A6NGW2 1772 aa12.46□□□□□ -0.42
AP002008.3-201ENST00000528614 PCDH11XQ9BZA7 1347 aa12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 PCDH11YQ9BZA8 1340 aa12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 HSP90B1P14625 803 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms