RNA–Protein interactions for RNA: ENST00000528316.5

AP003555.1-201, humanhuman

TSL 3

Gene AP003555.1, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-201ENST00000528316 CAMTA2O94983 1202 aa11.1□□□□□ -0.63
AP003555.1-201ENST00000528316 SNRPA1P09661 255 aaKnown RBP11.1□□□□□ -0.63
AP003555.1-201ENST00000528316 TYW1BQ6NUM6 668 aa11.1□□□□□ -0.63
AP003555.1-201ENST00000528316 FBXW7Q969H0 707 aa11.1□□□□□ -0.63
AP003555.1-201ENST00000528316 THUMPD2Q9BTF0 503 aaKnown RBP11.1□□□□□ -0.63
AP003555.1-201ENST00000528316 UBR2Q8IWV8 1755 aa11.1□□□□□ -0.63
AP003555.1-201ENST00000528316 NBPF26B4DH59 902 aa11.09□□□□□ -0.63
AP003555.1-201ENST00000528316 RALBP1Q15311 655 aa11.09□□□□□ -0.63
AP003555.1-201ENST00000528316 NFE2L2Q16236 605 aa11.09□□□□□ -0.63
AP003555.1-201ENST00000528316 C9orf131Q5VYM1 1079 aa11.09□□□□□ -0.63
AP003555.1-201ENST00000528316 NBPF10Q6P3W6 841 aaKnown RBP11.09□□□□□ -0.63
AP003555.1-201ENST00000528316 NPM2Q86SE8 214 aaKnown RBP11.09□□□□□ -0.63
AP003555.1-201ENST00000528316 DZIP3Q86Y13 1208 aaKnown RBP11.09□□□□□ -0.63
AP003555.1-201ENST00000528316 C2CD5Q86YS7 1000 aa11.09□□□□□ -0.63
AP003555.1-201ENST00000528316 NBPF15Q8N660 670 aa11.09□□□□□ -0.63
AP003555.1-201ENST00000528316 TSR3Q9UJK0 312 aaKnown RBP11.09□□□□□ -0.63
AP003555.1-201ENST00000528316 SIPA1L3O60292 1781 aaPredicted RBP11.08□□□□□ -0.64
AP003555.1-201ENST00000528316 CARMIL3Q8ND23 1372 aa11.08□□□□□ -0.64
AP003555.1-201ENST00000528316 NRG2O14511 850 aaPredicted RBP11.08□□□□□ -0.64
AP003555.1-201ENST00000528316 NEFMP07197 916 aa11.08□□□□□ -0.64
AP003555.1-201ENST00000528316 PRR5LQ6MZQ0 368 aa11.08□□□□□ -0.64
AP003555.1-201ENST00000528316 LARP6Q9BRS8 491 aaKnown RBP11.08□□□□□ -0.64
AP003555.1-201ENST00000528316 H0YIN7 160 aa11.07□□□□□ -0.64
AP003555.1-201ENST00000528316 DDX27Q96GQ7 796 aaKnown RBP11.07□□□□□ -0.64
AP003555.1-201ENST00000528316 SETDB2Q96T68 719 aa11.07□□□□□ -0.64
AP003555.1-201ENST00000528316 HPS5Q9UPZ3 1129 aa11.07□□□□□ -0.64
AP003555.1-201ENST00000528316 CEP350Q5VT06 3117 aa11.07□□□□□ -0.64
AP003555.1-201ENST00000528316 EIF4A1P60842 406 aaKnown RBP11.06□□□□□ -0.64
AP003555.1-201ENST00000528316 RASSF7Q02833 373 aa11.06□□□□□ -0.64
AP003555.1-201ENST00000528316 MFSD10Q14728 455 aa11.06□□□□□ -0.64
AP003555.1-201ENST00000528316 NGEFQ8N5V2 710 aa11.06□□□□□ -0.64
AP003555.1-201ENST00000528316 TTLL6Q8N841 843 aa11.06□□□□□ -0.64
AP003555.1-201ENST00000528316 ZNF622Q969S3 477 aaKnown RBP eCLIP11.06□□□□□ -0.64
AP003555.1-201ENST00000528316 BRIP1Q9BX63 1249 aa11.06□□□□□ -0.64
AP003555.1-201ENST00000528316 PRKD2Q9BZL6 878 aa11.06□□□□□ -0.64
AP003555.1-201ENST00000528316 PNNQ9H307 717 aaKnown RBP11.06□□□□□ -0.64
AP003555.1-201ENST00000528316 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.06□□□□□ -0.64
AP003555.1-201ENST00000528316 TRIM6-TRIM34B2RNG4 842 aa11.05□□□□□ -0.64
AP003555.1-201ENST00000528316 PRELPP51888 382 aa11.05□□□□□ -0.64
AP003555.1-201ENST00000528316 RIPK4P57078 832 aa11.05□□□□□ -0.64
AP003555.1-201ENST00000528316 HLFQ16534 295 aa11.05□□□□□ -0.64
AP003555.1-201ENST00000528316 PNISRQ8TF01 805 aaKnown RBP11.05□□□□□ -0.64
AP003555.1-201ENST00000528316 NMRK2Q9NPI5 230 aa11.05□□□□□ -0.64
AP003555.1-201ENST00000528316 RNF181Q9P0P0 153 aa11.05□□□□□ -0.64
AP003555.1-201ENST00000528316 MAPK8IP3Q9UPT6 1336 aa11.05□□□□□ -0.64
AP003555.1-201ENST00000528316 PDE6BP35913 854 aa11.04□□□□□ -0.64
AP003555.1-201ENST00000528316 CLEC4GQ6UXB4 293 aa11.04□□□□□ -0.64
AP003555.1-201ENST00000528316 CCDC146Q8IYE0 955 aa11.04□□□□□ -0.64
AP003555.1-201ENST00000528316 CNBD1Q8NA66 436 aa11.04□□□□□ -0.64
AP003555.1-201ENST00000528316 RRP7AQ9Y3A4 280 aaKnown RBP11.04□□□□□ -0.64
AP003555.1-201ENST00000528316 AFDNP55196 1824 aaKnown RBP11.04□□□□□ -0.64
AP003555.1-201ENST00000528316 NRXN2Q9P2S2 1712 aa11.04□□□□□ -0.64
AP003555.1-201ENST00000528316 FAM177BA6PVY3 158 aa11.03□□□□□ -0.64
AP003555.1-201ENST00000528316 NPHP1O15259 732 aa11.03□□□□□ -0.64
AP003555.1-201ENST00000528316 C21orf2O43822 256 aa11.03□□□□□ -0.64
AP003555.1-201ENST00000528316 TMPOP42166 694 aaKnown RBP11.03□□□□□ -0.64
AP003555.1-201ENST00000528316 TJAP1Q5JTD0 557 aa11.03□□□□□ -0.64
AP003555.1-201ENST00000528316 C6orf132Q5T0Z8 1188 aa11.03□□□□□ -0.64
AP003555.1-201ENST00000528316 LRCH3Q96II8 777 aa11.03□□□□□ -0.64
AP003555.1-201ENST00000528316 BRCA1P38398 1863 aaKnown RBP11.03□□□□□ -0.64
AP003555.1-201ENST00000528316 MYBBP1AQ9BQG0 1328 aaKnown RBP11.03□□□□□ -0.64
AP003555.1-201ENST00000528316 NFKBIEO00221 500 aa11.02□□□□□ -0.65
AP003555.1-201ENST00000528316 MYL6BP14649 208 aa11.02□□□□□ -0.65
AP003555.1-201ENST00000528316 ST5P78524 1137 aa11.02□□□□□ -0.65
AP003555.1-201ENST00000528316 NEUROD2Q15784 382 aa11.02□□□□□ -0.65
AP003555.1-201ENST00000528316 TTLL7Q6ZT98 887 aa11.02□□□□□ -0.65
AP003555.1-201ENST00000528316 NBPF5PQ86XG9 351 aaPredicted RBP11.02□□□□□ -0.65
AP003555.1-201ENST00000528316 NIP7Q9Y221 180 aaKnown RBP eCLIP11.02□□□□□ -0.65
AP003555.1-201ENST00000528316 SRGNP10124 158 aa11.01□□□□□ -0.65
AP003555.1-201ENST00000528316 LMNB1P20700 586 aa11.01□□□□□ -0.65
AP003555.1-201ENST00000528316 ZNF787Q6DD87 383 aa11.01□□□□□ -0.65
AP003555.1-201ENST00000528316 RRAGCQ9HB90 399 aa11.01□□□□□ -0.65
AP003555.1-201ENST00000528316 TSPYL4Q9UJ04 414 aa11.01□□□□□ -0.65
AP003555.1-201ENST00000528316 ADAMTS8Q9UP79 889 aa11.01□□□□□ -0.65
AP003555.1-201ENST00000528316 PDZRN3Q9UPQ7 1066 aa11.01□□□□□ -0.65
AP003555.1-201ENST00000528316 ZNF652Q9Y2D9 606 aa11.01□□□□□ -0.65
AP003555.1-201ENST00000528316 TOMM70O94826 608 aa11□□□□□ -0.65
AP003555.1-201ENST00000528316 HSPA6P17066 643 aa11□□□□□ -0.65
AP003555.1-201ENST00000528316 EIF2S2P20042 333 aaKnown RBP11□□□□□ -0.65
AP003555.1-201ENST00000528316 TPTE2Q6XPS3 522 aa11□□□□□ -0.65
AP003555.1-201ENST00000528316 MASTLQ96GX5 879 aa11□□□□□ -0.65
AP003555.1-201ENST00000528316 ARFGEF1Q9Y6D6 1849 aa11□□□□□ -0.65
AP003555.1-201ENST00000528316 SCN7AQ01118 1682 aa10.99□□□□□ -0.65
AP003555.1-201ENST00000528316 ERVV-1B6SEH8 477 aa10.99□□□□□ -0.65
AP003555.1-201ENST00000528316 PDIA6Q15084 440 aa10.99□□□□□ -0.65
AP003555.1-201ENST00000528316 STYK1Q6J9G0 422 aa10.99□□□□□ -0.65
AP003555.1-201ENST00000528316 CNKSR1Q969H4 720 aa10.99□□□□□ -0.65
AP003555.1-201ENST00000528316 PRKRIP1Q9H875 184 aaPredicted RBP10.99□□□□□ -0.65
AP003555.1-201ENST00000528316 KLRG2A4D1S0 409 aaPredicted RBP10.98□□□□□ -0.65
AP003555.1-201ENST00000528316 ANXA1P04083 346 aa10.98□□□□□ -0.65
AP003555.1-201ENST00000528316 GPTP24298 496 aa10.98□□□□□ -0.65
AP003555.1-201ENST00000528316 WDR43Q15061 677 aaKnown RBP eCLIP10.98□□□□□ -0.65
AP003555.1-201ENST00000528316 PROSER3Q2NL68 480 aa10.98□□□□□ -0.65
AP003555.1-201ENST00000528316 PRPF40BQ6NWY9 871 aaKnown RBP10.98□□□□□ -0.65
AP003555.1-201ENST00000528316 LRP10Q7Z4F1 713 aa10.98□□□□□ -0.65
AP003555.1-201ENST00000528316 NUTM1Q86Y26 1132 aa10.98□□□□□ -0.65
AP003555.1-201ENST00000528316 NECTIN2Q92692 538 aa10.98□□□□□ -0.65
AP003555.1-201ENST00000528316 ZNF775Q96BV0 537 aaPredicted RBP10.98□□□□□ -0.65
AP003555.1-201ENST00000528316 RUNDC1Q96C34 613 aa10.98□□□□□ -0.65
AP003555.1-201ENST00000528316 ZBTB3Q9H5J0 574 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms