RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 PI4KAP2A4QPH2 592 aa17.22■□□□□ 0.35
CAPN1-214ENST00000528165 PI4KAP1Q8N8J0 262 aa17.22■□□□□ 0.35
CAPN1-214ENST00000528165 CALCOCO1Q9P1Z2 691 aa17.22■□□□□ 0.35
CAPN1-214ENST00000528165 NPHP1O15259 732 aa17.21■□□□□ 0.35
CAPN1-214ENST00000528165 RESTQ13127 1097 aa17.21■□□□□ 0.35
CAPN1-214ENST00000528165 CREBRFQ8IUR6 639 aa17.21■□□□□ 0.35
CAPN1-214ENST00000528165 BRF1Q92994 677 aa17.21■□□□□ 0.35
CAPN1-214ENST00000528165 FMN2Q9NZ56 1722 aa17.21■□□□□ 0.35
CAPN1-214ENST00000528165 ZSCAN16Q9H4T2 348 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-214ENST00000528165 BMS1Q14692 1282 aaKnown RBP17.2■□□□□ 0.34
CAPN1-214ENST00000528165 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-214ENST00000528165 JAK2O60674 1132 aa17.2■□□□□ 0.34
CAPN1-214ENST00000528165 GSDMDP57764 484 aa17.2■□□□□ 0.34
CAPN1-214ENST00000528165 IRX5P78411 483 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-214ENST00000528165 CEBPZQ03701 1054 aaKnown RBP17.2■□□□□ 0.34
CAPN1-214ENST00000528165 MTX1Q13505 466 aa17.2■□□□□ 0.34
CAPN1-214ENST00000528165 DDX11Q96FC9 970 aa17.2■□□□□ 0.34
CAPN1-214ENST00000528165 ST7Q9NRC1 585 aa17.2■□□□□ 0.34
CAPN1-214ENST00000528165 KCND1Q9NSA2 647 aa17.2■□□□□ 0.34
CAPN1-214ENST00000528165 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
CAPN1-214ENST00000528165 ANO10Q9NW15 660 aa17.2■□□□□ 0.34
CAPN1-214ENST00000528165 ERBB3P21860 1342 aa17.19■□□□□ 0.34
CAPN1-214ENST00000528165 SNW1Q13573 536 aaKnown RBP17.19■□□□□ 0.34
CAPN1-214ENST00000528165 CCAR1Q8IX12 1150 aaKnown RBP17.19■□□□□ 0.34
CAPN1-214ENST00000528165 FSD1Q9BTV5 496 aa17.19■□□□□ 0.34
CAPN1-214ENST00000528165 ZNF446Q9NWS9 450 aa17.19■□□□□ 0.34
CAPN1-214ENST00000528165 HMG20BQ9P0W2 317 aa17.19■□□□□ 0.34
CAPN1-214ENST00000528165 CHPF2Q9P2E5 772 aa17.19■□□□□ 0.34
CAPN1-214ENST00000528165 PA2G4Q9UQ80 394 aaKnown RBP17.19■□□□□ 0.34
CAPN1-214ENST00000528165 A0A0D9SFI3 127 aa17.19■□□□□ 0.34
CAPN1-214ENST00000528165 CCDC73Q6ZRK6 1079 aa17.19■□□□□ 0.34
CAPN1-214ENST00000528165 DHX40Q8IX18 779 aaKnown RBP17.19■□□□□ 0.34
CAPN1-214ENST00000528165 GTF3C6Q969F1 213 aa17.19■□□□□ 0.34
CAPN1-214ENST00000528165 SNRKQ9NRH2 765 aa17.19■□□□□ 0.34
CAPN1-214ENST00000528165 TAF6LQ9Y6J9 622 aa17.19■□□□□ 0.34
CAPN1-214ENST00000528165 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-214ENST00000528165 KINO60870 393 aaKnown RBP17.18■□□□□ 0.34
CAPN1-214ENST00000528165 CEP57L1Q8IYX8 460 aa17.18■□□□□ 0.34
CAPN1-214ENST00000528165 ADCY9O60503 1353 aa17.18■□□□□ 0.34
CAPN1-214ENST00000528165 C9orf78Q9NZ63 289 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-214ENST00000528165 ERCC6LQ2NKX8 1250 aa17.17■□□□□ 0.34
CAPN1-214ENST00000528165 ROBO2Q9HCK4 1378 aa17.17■□□□□ 0.34
CAPN1-214ENST00000528165 HSP90B1P14625 803 aaKnown RBP17.17■□□□□ 0.34
CAPN1-214ENST00000528165 CHMP4AQ9BY43 222 aa17.17■□□□□ 0.34
CAPN1-214ENST00000528165 NAT10Q9H0A0 1025 aaKnown RBP17.17■□□□□ 0.34
CAPN1-214ENST00000528165 H2AFXP16104 143 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-214ENST00000528165 KRT32Q14532 448 aa17.16■□□□□ 0.34
CAPN1-214ENST00000528165 AOPEPQ8N6M6 819 aa17.16■□□□□ 0.34
CAPN1-214ENST00000528165 L2HGDHQ9H9P8 463 aa17.16■□□□□ 0.34
CAPN1-214ENST00000528165 HDGFP51858 240 aaKnown RBP17.16■□□□□ 0.34
CAPN1-214ENST00000528165 TSGA10IPQ3SY00 556 aa17.16■□□□□ 0.34
CAPN1-214ENST00000528165 IMPACTQ9P2X3 320 aa17.16■□□□□ 0.34
CAPN1-214ENST00000528165 A0A087WWV3 80 aa17.15■□□□□ 0.34
CAPN1-214ENST00000528165 CCDC8Q9H0W5 538 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-214ENST00000528165 OSBPL5Q9H0X9 879 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-214ENST00000528165 BOLA2Q9H3K6 86 aa17.15■□□□□ 0.34
CAPN1-214ENST00000528165 GOLPH3LQ9H4A5 285 aa17.15■□□□□ 0.34
CAPN1-214ENST00000528165 HDAC5Q9UQL6 1122 aa17.15■□□□□ 0.34
CAPN1-214ENST00000528165 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
CAPN1-214ENST00000528165 SYT10Q6XYQ8 523 aa17.15■□□□□ 0.34
CAPN1-214ENST00000528165 RCOR1Q9UKL0 485 aa17.15■□□□□ 0.34
CAPN1-214ENST00000528165 TOPAZ1Q8N9V7 1692 aa17.14■□□□□ 0.33
CAPN1-214ENST00000528165 ANXA1P04083 346 aa17.14■□□□□ 0.33
CAPN1-214ENST00000528165 CYP2C19P33261 490 aa17.14■□□□□ 0.33
CAPN1-214ENST00000528165 FAM160A1Q05DH4 1040 aa17.14■□□□□ 0.33
CAPN1-214ENST00000528165 E4F1Q66K89 784 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-214ENST00000528165 FBXW7Q969H0 707 aa17.14■□□□□ 0.33
CAPN1-214ENST00000528165 EAF2Q96CJ1 260 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-214ENST00000528165 PPP1R13BQ96KQ4 1090 aa17.14■□□□□ 0.33
CAPN1-214ENST00000528165 FHOD1Q9Y613 1164 aa17.14■□□□□ 0.33
CAPN1-214ENST00000528165 NRDCO43847 1150 aa17.14■□□□□ 0.33
CAPN1-214ENST00000528165 CLCN6P51797 869 aa17.14■□□□□ 0.33
CAPN1-214ENST00000528165 EIF4A1P60842 406 aaKnown RBP17.14■□□□□ 0.33
CAPN1-214ENST00000528165 G3BP1Q13283 466 aaKnown RBP eCLIP17.14■□□□□ 0.338e-6■■□□□ 11.5
CAPN1-214ENST00000528165 ZNF589Q86UQ0 364 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-214ENST00000528165 CCDC150Q8NCX0 1101 aa17.14■□□□□ 0.33
CAPN1-214ENST00000528165 NEK1Q96PY6 1258 aa17.14■□□□□ 0.33
CAPN1-214ENST00000528165 HOXB7P09629 217 aa17.13■□□□□ 0.33
CAPN1-214ENST00000528165 ADD1P35611 737 aaKnown RBP17.13■□□□□ 0.33
CAPN1-214ENST00000528165 ARHGAP29Q52LW3 1261 aa17.13■□□□□ 0.33
CAPN1-214ENST00000528165 Q6ZUG5 572 aa17.13■□□□□ 0.33
CAPN1-214ENST00000528165 FTOQ9C0B1 505 aaKnown RBP eCLIP17.13■□□□□ 0.33
CAPN1-214ENST00000528165 PSDA5PKW4 1024 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-214ENST00000528165 VGLL3A8MV65 326 aa17.12■□□□□ 0.33
CAPN1-214ENST00000528165 NUTM2GQ5VZR2 741 aa17.12■□□□□ 0.33
CAPN1-214ENST00000528165 NBPF11Q86T75 865 aa17.12■□□□□ 0.33
CAPN1-214ENST00000528165 DNAJC2Q99543 621 aaKnown RBP17.12■□□□□ 0.33
CAPN1-214ENST00000528165 ARGLU1Q9NWB6 273 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-214ENST00000528165 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.12■□□□□ 0.333e-6■□□□□ 10.3
CAPN1-214ENST00000528165 TUBB4AP04350 444 aa17.12■□□□□ 0.33
CAPN1-214ENST00000528165 PNMA6AP0CW24 399 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-214ENST00000528165 SFPQP23246 707 aaKnown RBP eCLIP17.12■□□□□ 0.33
CAPN1-214ENST00000528165 FOSBP53539 338 aa17.12■□□□□ 0.33
CAPN1-214ENST00000528165 ZRSR1Q15695 479 aaKnown RBP17.12■□□□□ 0.33
CAPN1-214ENST00000528165 CCDC93Q567U6 631 aa17.12■□□□□ 0.33
CAPN1-214ENST00000528165 TAF5LO75529 589 aa17.11■□□□□ 0.33
CAPN1-214ENST00000528165 ALDH1L1O75891 902 aa17.11■□□□□ 0.33
CAPN1-214ENST00000528165 SASH1O94885 1247 aa17.11■□□□□ 0.33
CAPN1-214ENST00000528165 SMC2O95347 1197 aa17.11■□□□□ 0.33
CAPN1-214ENST00000528165 ME1P48163 572 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms