RNA–Protein interactions for RNA: ENST00000525948.5

PUM1-215, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-215	ENST00000525948	DUOX1	Q9NRD9	1551 aa		13.66	□□□□□ -0.22
PUM1-215	ENST00000525948	GPT	P24298	496 aa		13.66	□□□□□ -0.22
PUM1-215	ENST00000525948	GMPS	P49915	693 aa	Predicted RBP	13.66	□□□□□ -0.22
PUM1-215	ENST00000525948	CXCL9	Q07325	125 aa		13.66	□□□□□ -0.22
PUM1-215	ENST00000525948	CNGB1	Q14028	1251 aa	Predicted RBP	13.66	□□□□□ -0.22
PUM1-215	ENST00000525948	DCTN1	Q14203	1278 aa		13.66	□□□□□ -0.22
PUM1-215	ENST00000525948	GRIPAP1	Q4V328	841 aa		13.66	□□□□□ -0.22
PUM1-215	ENST00000525948	NGEF	Q8N5V2	710 aa		13.66	□□□□□ -0.22
PUM1-215	ENST00000525948	TRPM4	Q8TD43	1214 aa		13.66	□□□□□ -0.22
PUM1-215	ENST00000525948	MAP3K15	Q6ZN16	1313 aa		13.65	□□□□□ -0.22
PUM1-215	ENST00000525948	CLSPN	Q9HAW4	1339 aa		13.65	□□□□□ -0.22
PUM1-215	ENST00000525948	LRRC37A	A6NMS7	1700 aa		13.65	□□□□□ -0.22
PUM1-215	ENST00000525948	HIRA	P54198	1017 aa	Predicted RBP	13.65	□□□□□ -0.22
PUM1-215	ENST00000525948	TTLL7	Q6ZT98	887 aa		13.65	□□□□□ -0.22
PUM1-215	ENST00000525948	PLCD3	Q8N3E9	789 aa		13.65	□□□□□ -0.22
PUM1-215	ENST00000525948	RBM17	Q96I25	401 aa	Known RBP	13.65	□□□□□ -0.22
PUM1-215	ENST00000525948	CRAMP1	Q96RY5	1269 aa		13.65	□□□□□ -0.22
PUM1-215	ENST00000525948	CDHR2	Q9BYE9	1310 aa		13.64	□□□□□ -0.23
PUM1-215	ENST00000525948	SHTN1	A0MZ66	631 aa		13.64	□□□□□ -0.23
PUM1-215	ENST00000525948	ERVV-1	B6SEH8	477 aa		13.64	□□□□□ -0.23
PUM1-215	ENST00000525948	NTSR2	O95665	410 aa		13.64	□□□□□ -0.23
PUM1-215	ENST00000525948	NOG	Q13253	232 aa		13.64	□□□□□ -0.23
PUM1-215	ENST00000525948	SUSD4	Q5VX71	490 aa		13.64	□□□□□ -0.23
PUM1-215	ENST00000525948	PGAP2	Q9UHJ9	254 aa		13.64	□□□□□ -0.23
PUM1-215	ENST00000525948	ZNRF3	Q9ULT6	936 aa		13.64	□□□□□ -0.23
PUM1-215	ENST00000525948	ABCC4	O15439	1325 aa		13.64	□□□□□ -0.23
PUM1-215	ENST00000525948	HUNK	P57058	714 aa		13.63	□□□□□ -0.23
PUM1-215	ENST00000525948	DLK2	Q6UY11	383 aa		13.63	□□□□□ -0.23
PUM1-215	ENST00000525948	RTF1	Q92541	710 aa	Known RBP	13.63	□□□□□ -0.23
PUM1-215	ENST00000525948	ZBTB3	Q9H5J0	574 aa		13.63	□□□□□ -0.23
PUM1-215	ENST00000525948	DDX60	Q8IY21	1712 aa	Known RBP	13.63	□□□□□ -0.23
PUM1-215	ENST00000525948	C19orf67	A6NJJ6	358 aa		13.62	□□□□□ -0.23
PUM1-215	ENST00000525948	RAD17	O75943	681 aa		13.62	□□□□□ -0.23
PUM1-215	ENST00000525948	KIF6	Q6ZMV9	814 aa		13.62	□□□□□ -0.23
PUM1-215	ENST00000525948	ZC3H15	Q8WU90	426 aa	Known RBP	13.62	□□□□□ -0.23
PUM1-215	ENST00000525948	MIS18A	Q9NYP9	233 aa		13.62	□□□□□ -0.23
PUM1-215	ENST00000525948	ATP6V0A2	Q9Y487	856 aa		13.62	□□□□□ -0.23
PUM1-215	ENST00000525948	FAM155A	B1AL88	458 aa	Predicted RBP	13.61	□□□□□ -0.23
PUM1-215	ENST00000525948	CDC37L1	Q7L3B6	337 aa		13.61	□□□□□ -0.23
PUM1-215	ENST00000525948	ZNF34	Q8IZ26	560 aa		13.61	□□□□□ -0.23
PUM1-215	ENST00000525948	BCL2L13	Q9BXK5	485 aa		13.61	□□□□□ -0.23
PUM1-215	ENST00000525948	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.61	□□□□□ -0.23
PUM1-215	ENST00000525948	MYL6B	P14649	208 aa		13.6	□□□□□ -0.23
PUM1-215	ENST00000525948	KIAA2012	Q0VF49	1180 aa		13.6	□□□□□ -0.23
PUM1-215	ENST00000525948	TRIM26	Q12899	539 aa	Predicted RBP	13.6	□□□□□ -0.23
PUM1-215	ENST00000525948	PRPF38B	Q5VTL8	546 aa	Known RBP	13.6	□□□□□ -0.23
PUM1-215	ENST00000525948	USP48	Q86UV5	1035 aa		13.6	□□□□□ -0.23
PUM1-215	ENST00000525948	VPS33B	Q9H267	617 aa		13.6	□□□□□ -0.23
PUM1-215	ENST00000525948	SAGE1	Q9NXZ1	904 aa		13.6	□□□□□ -0.23
PUM1-215	ENST00000525948	RRP7A	Q9Y3A4	280 aa	Known RBP	13.6	□□□□□ -0.23
PUM1-215	ENST00000525948	YDJC	A8MPS7	323 aa		13.59	□□□□□ -0.23
PUM1-215	ENST00000525948	MNX1	P50219	401 aa	Predicted RBP	13.59	□□□□□ -0.23
PUM1-215	ENST00000525948	RGMB	Q6NW40	437 aa		13.59	□□□□□ -0.23
PUM1-215	ENST00000525948	DPP8	Q6V1X1	898 aa	Predicted RBP	13.59	□□□□□ -0.23
PUM1-215	ENST00000525948	MICALL2	Q8IY33	904 aa		13.59	□□□□□ -0.23
PUM1-215	ENST00000525948	SUPT20H	Q8NEM7	779 aa		13.59	□□□□□ -0.23
PUM1-215	ENST00000525948	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.59	□□□□□ -0.23
PUM1-215	ENST00000525948	CNOT7	Q9UIV1	285 aa	Known RBP	13.59	□□□□□ -0.23
PUM1-215	ENST00000525948	SCN9A	Q15858	1988 aa		13.58	□□□□□ -0.24
PUM1-215	ENST00000525948	TAF7	Q15545	349 aa	Predicted RBP	13.58	□□□□□ -0.24
PUM1-215	ENST00000525948	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.58	□□□□□ -0.24
PUM1-215	ENST00000525948	NLRP3	Q96P20	1036 aa		13.58	□□□□□ -0.24
PUM1-215	ENST00000525948	PCGF6	Q9BYE7	350 aa		13.58	□□□□□ -0.24
PUM1-215	ENST00000525948	TMX4	Q9H1E5	349 aa	Predicted RBP	13.58	□□□□□ -0.24
PUM1-215	ENST00000525948	COL4A1	P02462	1669 aa		13.58	□□□□□ -0.24
PUM1-215	ENST00000525948	ADM5	C9JUS6	153 aa		13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	HTATSF1	O43719	755 aa	Known RBP	13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	TRPA1	O75762	1119 aa		13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	EGFR	P00533	1210 aa		13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	KIF23	Q02241	960 aa	Predicted RBP	13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	TNIP1	Q15025	636 aa		13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	PPP1R42	Q7Z4L9	355 aa		13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	MPND	Q8N594	471 aa		13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	CFAP53	Q96M91	514 aa		13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	GBA2	Q9HCG7	927 aa	Predicted RBP	13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	RNF186	Q9NXI6	227 aa		13.57	□□□□□ -0.24
PUM1-215	ENST00000525948	SAMD7	Q7Z3H4	446 aa		13.56	□□□□□ -0.24
PUM1-215	ENST00000525948	KRT26	Q7Z3Y9	468 aa		13.56	□□□□□ -0.24
PUM1-215	ENST00000525948	SP8	Q8IXZ3	490 aa		13.56	□□□□□ -0.24
PUM1-215	ENST00000525948	PSME4	Q14997	1843 aa		13.55	□□□□□ -0.24
PUM1-215	ENST00000525948		H7C1D1	291 aa		13.55	□□□□□ -0.24
PUM1-215	ENST00000525948	SLC10A3	P09131	477 aa		13.55	□□□□□ -0.24
PUM1-215	ENST00000525948	CD44	P16070	742 aa	Known RBP	13.55	□□□□□ -0.24
PUM1-215	ENST00000525948	EIF4A1	P60842	406 aa	Known RBP	13.55	□□□□□ -0.24
PUM1-215	ENST00000525948	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.55	□□□□□ -0.24
PUM1-215	ENST00000525948	PARP10	Q53GL7	1025 aa		13.55	□□□□□ -0.24
PUM1-215	ENST00000525948	CTU1	Q7Z7A3	348 aa	Known RBP	13.55	□□□□□ -0.24
PUM1-215	ENST00000525948	NUDC	Q9Y266	331 aa		13.55	□□□□□ -0.24
PUM1-215	ENST00000525948	PAPPA2	Q9BXP8	1791 aa		13.54	□□□□□ -0.24
PUM1-215	ENST00000525948	PSMD14	O00487	310 aa		13.54	□□□□□ -0.24
PUM1-215	ENST00000525948	VASP	P50552	380 aa	Predicted RBP	13.54	□□□□□ -0.24
PUM1-215	ENST00000525948	ZNF157	P51786	506 aa	Predicted RBP	13.54	□□□□□ -0.24
PUM1-215	ENST00000525948	SLC10A5	Q5PT55	438 aa		13.54	□□□□□ -0.24
PUM1-215	ENST00000525948	LRP10	Q7Z4F1	713 aa		13.54	□□□□□ -0.24
PUM1-215	ENST00000525948	C2orf69	Q8N8R5	385 aa		13.54	□□□□□ -0.24
PUM1-215	ENST00000525948	CCDC102A	Q96A19	550 aa		13.54	□□□□□ -0.24
PUM1-215	ENST00000525948	UTP14A	Q9BVJ6	771 aa	Known RBP	13.54	□□□□□ -0.24
PUM1-215	ENST00000525948	BBOX1	O75936	387 aa		13.53	□□□□□ -0.24

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