RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 TNIP1Q15025 636 aa9.46□□□□□ -0.9
SSH3-204ENST00000525913 SLC10A5Q5PT55 438 aa9.46□□□□□ -0.9
SSH3-204ENST00000525913 TTLL7Q6ZT98 887 aa9.46□□□□□ -0.9
SSH3-204ENST00000525913 KRT26Q7Z3Y9 468 aa9.46□□□□□ -0.9
SSH3-204ENST00000525913 SP8Q8IXZ3 490 aa9.46□□□□□ -0.9
SSH3-204ENST00000525913 REM2Q8IYK8 340 aaPredicted RBP9.46□□□□□ -0.9
SSH3-204ENST00000525913 ZNF34Q8IZ26 560 aa9.46□□□□□ -0.9
SSH3-204ENST00000525913 SUPT20HQ8NEM7 779 aa9.46□□□□□ -0.9
SSH3-204ENST00000525913 NTSR2O95665 410 aa9.45□□□□□ -0.9
SSH3-204ENST00000525913 TBC1D8O95759 1140 aa9.45□□□□□ -0.9
SSH3-204ENST00000525913 FBXO46Q6PJ61 603 aaPredicted RBP9.45□□□□□ -0.9
SSH3-204ENST00000525913 RASAL3Q86YV0 1011 aa9.45□□□□□ -0.9
SSH3-204ENST00000525913 KNSTRNQ9Y448 316 aa9.45□□□□□ -0.9
SSH3-204ENST00000525913 MAP3K15Q6ZN16 1313 aa9.45□□□□□ -0.9
SSH3-204ENST00000525913 IBTKQ9P2D0 1353 aaPredicted RBP9.45□□□□□ -0.9
SSH3-204ENST00000525913 COL3A1P02461 1466 aaPredicted RBP9.45□□□□□ -0.9
SSH3-204ENST00000525913 ANKRD36CQ5JPF3 1778 aa9.45□□□□□ -0.9
SSH3-204ENST00000525913 POTEFA5A3E0 1075 aa9.44□□□□□ -0.9
SSH3-204ENST00000525913 PSMD14O00487 310 aa9.44□□□□□ -0.9
SSH3-204ENST00000525913 GPTP24298 496 aa9.44□□□□□ -0.9
SSH3-204ENST00000525913 TBC1D10BQ4KMP7 808 aaPredicted RBP9.44□□□□□ -0.9
SSH3-204ENST00000525913 NOM1Q5C9Z4 860 aaKnown RBP9.44□□□□□ -0.9
SSH3-204ENST00000525913 MPNDQ8N594 471 aa9.44□□□□□ -0.9
SSH3-204ENST00000525913 NLRP3Q96P20 1036 aa9.44□□□□□ -0.9
SSH3-204ENST00000525913 R3HDMLQ9H3Y0 253 aa9.44□□□□□ -0.9
SSH3-204ENST00000525913 KCNQ5Q9NR82 932 aa9.44□□□□□ -0.9
SSH3-204ENST00000525913 HDAC9Q9UKV0 1011 aa9.44□□□□□ -0.9
SSH3-204ENST00000525913 ABCC4O15439 1325 aa9.44□□□□□ -0.9
SSH3-204ENST00000525913 PAPPA2Q9BXP8 1791 aa9.44□□□□□ -0.9
SSH3-204ENST00000525913 RBBP6Q7Z6E9 1792 aaKnown RBP9.43□□□□□ -0.9
SSH3-204ENST00000525913 DUOX1Q9NRD9 1551 aa9.43□□□□□ -0.9
SSH3-204ENST00000525913 ASTN2O75129 1339 aaPredicted RBP9.43□□□□□ -0.9
SSH3-204ENST00000525913 GPR25O00155 361 aa9.43□□□□□ -0.9
SSH3-204ENST00000525913 PER1O15534 1290 aaPredicted RBP9.43□□□□□ -0.9
SSH3-204ENST00000525913 BBOX1O75936 387 aa9.43□□□□□ -0.9
SSH3-204ENST00000525913 TM4SF4P48230 202 aa9.43□□□□□ -0.9
SSH3-204ENST00000525913 DPP8Q6V1X1 898 aaPredicted RBP9.43□□□□□ -0.9
SSH3-204ENST00000525913 NGEFQ8N5V2 710 aa9.43□□□□□ -0.9
SSH3-204ENST00000525913 DCPSQ96C86 337 aaKnown RBP9.43□□□□□ -0.9
SSH3-204ENST00000525913 KIAA0100Q14667 2235 aaKnown RBP9.43□□□□□ -0.9
SSH3-204ENST00000525913 SCN9AQ15858 1988 aa9.43□□□□□ -0.9
SSH3-204ENST00000525913 LAMB4A4D0S4 1761 aa9.42□□□□□ -0.9
SSH3-204ENST00000525913 RBM26Q5T8P6 1007 aaKnown RBP9.42□□□□□ -0.9
SSH3-204ENST00000525913 MCM10Q7L590 875 aa9.42□□□□□ -0.9
SSH3-204ENST00000525913 CDCA5Q96FF9 252 aa9.42□□□□□ -0.9
SSH3-204ENST00000525913 U2SURPO15042 1029 aaKnown RBP9.41□□□□□ -0.9
SSH3-204ENST00000525913 HSPA5P11021 654 aaKnown RBP9.41□□□□□ -0.9
SSH3-204ENST00000525913 DCTN1Q14203 1278 aa9.41□□□□□ -0.9
SSH3-204ENST00000525913 GIGYF2Q6Y7W6 1299 aaKnown RBP9.41□□□□□ -0.9
SSH3-204ENST00000525913 MOB2Q70IA6 237 aa9.41□□□□□ -0.9
SSH3-204ENST00000525913 CFHR5Q9BXR6 569 aa9.41□□□□□ -0.9
SSH3-204ENST00000525913 RSPH6AQ9H0K4 717 aa9.41□□□□□ -0.9
SSH3-204ENST00000525913 TMX4Q9H1E5 349 aaPredicted RBP9.41□□□□□ -0.9
SSH3-204ENST00000525913 MIS18AQ9NYP9 233 aa9.41□□□□□ -0.9
SSH3-204ENST00000525913 COLQQ9Y215 455 aaPredicted RBP9.41□□□□□ -0.9
SSH3-204ENST00000525913 COL6A3P12111 3177 aa9.4□□□□□ -0.9
SSH3-204ENST00000525913 RTL9Q8NET4 1388 aa9.4□□□□□ -0.9
SSH3-204ENST00000525913 LRRC37AA6NMS7 1700 aa9.4□□□□□ -0.9
SSH3-204ENST00000525913 DLL1O00548 723 aa9.4□□□□□ -0.9
SSH3-204ENST00000525913 LRP10Q7Z4F1 713 aa9.4□□□□□ -0.9
SSH3-204ENST00000525913 PPP1R42Q7Z4L9 355 aa9.4□□□□□ -0.9
SSH3-204ENST00000525913 ZBTB3Q9H5J0 574 aa9.4□□□□□ -0.9
SSH3-204ENST00000525913 DBNDD1Q9H9R9 158 aa9.4□□□□□ -0.9
SSH3-204ENST00000525913 RRP7AQ9Y3A4 280 aaKnown RBP9.4□□□□□ -0.9
SSH3-204ENST00000525913 A0A0C4DFX4 3053 aa9.39□□□□□ -0.91
SSH3-204ENST00000525913 FKTNO75072 461 aa9.39□□□□□ -0.91
SSH3-204ENST00000525913 VIL1P09327 827 aaKnown RBP9.39□□□□□ -0.91
SSH3-204ENST00000525913 RPS12P25398 132 aaKnown RBP9.39□□□□□ -0.91
SSH3-204ENST00000525913 PRKAR2BP31323 418 aa9.39□□□□□ -0.91
SSH3-204ENST00000525913 FKBP1BP68106 108 aa9.39□□□□□ -0.91
SSH3-204ENST00000525913 TAF7Q15545 349 aaPredicted RBP9.39□□□□□ -0.91
SSH3-204ENST00000525913 KIF4BQ2VIQ3 1234 aa9.39□□□□□ -0.91
SSH3-204ENST00000525913 SULF1Q8IWU6 871 aa9.39□□□□□ -0.91
SSH3-204ENST00000525913 OTUD5Q96G74 571 aa9.39□□□□□ -0.91
SSH3-204ENST00000525913 GGA3Q9NZ52 723 aa9.39□□□□□ -0.91
SSH3-204ENST00000525913 POLLQ9UGP5 575 aa9.39□□□□□ -0.91
SSH3-204ENST00000525913 UBE2Q2LH0YL09 131 aa9.38□□□□□ -0.91
SSH3-204ENST00000525913 MYL6BP14649 208 aa9.38□□□□□ -0.91
SSH3-204ENST00000525913 EN2P19622 333 aaPredicted RBP9.38□□□□□ -0.91
SSH3-204ENST00000525913 EIF4G2P78344 907 aaKnown RBP eCLIP9.38□□□□□ -0.91
SSH3-204ENST00000525913 GRAPQ13588 217 aa9.38□□□□□ -0.91
SSH3-204ENST00000525913 SCARF1Q14162 830 aa9.38□□□□□ -0.91
SSH3-204ENST00000525913 WASHC4Q2M389 1173 aa9.38□□□□□ -0.91
SSH3-204ENST00000525913 PARP10Q53GL7 1025 aa9.38□□□□□ -0.91
SSH3-204ENST00000525913 INTS3Q68E01 1043 aaKnown RBP9.38□□□□□ -0.91
SSH3-204ENST00000525913 KIF6Q6ZMV9 814 aa9.38□□□□□ -0.91
SSH3-204ENST00000525913 GRAPLQ8TC17 118 aaPredicted RBP9.38□□□□□ -0.91
SSH3-204ENST00000525913 UTP14AQ9BVJ6 771 aaKnown RBP9.38□□□□□ -0.91
SSH3-204ENST00000525913 TIMELESSQ9UNS1 1208 aa9.38□□□□□ -0.91
SSH3-204ENST00000525913 KDM3BQ7LBC6 1761 aa9.37□□□□□ -0.91
SSH3-204ENST00000525913 COL4A1P02462 1669 aa9.37□□□□□ -0.91
SSH3-204ENST00000525913 RIMBP2O15034 1052 aa9.37□□□□□ -0.91
SSH3-204ENST00000525913 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
SSH3-204ENST00000525913 HCLS1P14317 486 aaPredicted RBP9.37□□□□□ -0.91
SSH3-204ENST00000525913 ZNF280AP59817 542 aaPredicted RBP9.37□□□□□ -0.91
SSH3-204ENST00000525913 EIF4A1P60842 406 aaKnown RBP9.37□□□□□ -0.91
SSH3-204ENST00000525913 CC2D1BQ5T0F9 858 aaKnown RBP9.37□□□□□ -0.91
SSH3-204ENST00000525913 ANGEL2Q5VTE6 544 aaKnown RBP9.37□□□□□ -0.91
SSH3-204ENST00000525913 SCAF8Q9UPN6 1271 aaKnown RBP9.37□□□□□ -0.91
SSH3-204ENST00000525913 PSME4Q14997 1843 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms