RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 COL26A1Q96A83 441 aa5.97□□□□□ -1.45
CSDE1-208ENST00000524652 IFT43Q96FT9 208 aa5.97□□□□□ -1.45
CSDE1-208ENST00000524652 ZFATQ9P243 1243 aa5.97□□□□□ -1.45
CSDE1-208ENST00000524652 C9orf172C9J069 976 aa5.96□□□□□ -1.46
CSDE1-208ENST00000524652 RARAP10276 462 aa5.96□□□□□ -1.46
CSDE1-208ENST00000524652 TARSP26639 723 aaKnown RBP5.96□□□□□ -1.46
CSDE1-208ENST00000524652 ARID4AP29374 1257 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-208ENST00000524652 SRPK2P78362 688 aaKnown RBP5.96□□□□□ -1.46
CSDE1-208ENST00000524652 GPLD1P80108 840 aa5.96□□□□□ -1.46
CSDE1-208ENST00000524652 COX20Q5RI15 118 aa5.96□□□□□ -1.46
CSDE1-208ENST00000524652 ILDR2Q71H61 639 aa5.96□□□□□ -1.46
CSDE1-208ENST00000524652 TREML1Q86YW5 311 aa5.96□□□□□ -1.46
CSDE1-208ENST00000524652 LPIN3Q9BQK8 851 aa5.96□□□□□ -1.46
CSDE1-208ENST00000524652 RTCBQ9Y3I0 505 aaKnown RBP5.96□□□□□ -1.46
CSDE1-208ENST00000524652 OPLAHO14841 1288 aa5.95□□□□□ -1.46
CSDE1-208ENST00000524652 PRMT3O60678 531 aa5.95□□□□□ -1.46
CSDE1-208ENST00000524652 ATG7O95352 703 aa5.95□□□□□ -1.46
CSDE1-208ENST00000524652 NRLP54845 237 aa5.95□□□□□ -1.46
CSDE1-208ENST00000524652 NRG1Q02297 640 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-208ENST00000524652 MSL1Q68DK7 614 aa5.95□□□□□ -1.46
CSDE1-208ENST00000524652 KRT25Q7Z3Z0 450 aa5.95□□□□□ -1.46
CSDE1-208ENST00000524652 FMR1NBQ8N0W7 255 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-208ENST00000524652 STK32AQ8WU08 396 aa5.95□□□□□ -1.46
CSDE1-208ENST00000524652 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-208ENST00000524652 ZBTB42B2RXF5 422 aa5.94□□□□□ -1.46
CSDE1-208ENST00000524652 SASH3O75995 380 aa5.94□□□□□ -1.46
CSDE1-208ENST00000524652 CPB1P15086 417 aa5.94□□□□□ -1.46
CSDE1-208ENST00000524652 SELPP16109 830 aa5.94□□□□□ -1.46
CSDE1-208ENST00000524652 ADGRE1Q14246 886 aa5.94□□□□□ -1.46
CSDE1-208ENST00000524652 RSPO4Q2I0M5 234 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-208ENST00000524652 NKAPLQ5M9Q1 402 aa5.94□□□□□ -1.46
CSDE1-208ENST00000524652 PERM1Q5SV97 790 aa5.94□□□□□ -1.46
CSDE1-208ENST00000524652 C16orf46Q6P387 395 aa5.94□□□□□ -1.46
CSDE1-208ENST00000524652 DTWD1Q8N5C7 304 aa5.94□□□□□ -1.46
CSDE1-208ENST00000524652 TTC9Q92623 222 aa5.94□□□□□ -1.46
CSDE1-208ENST00000524652 LENG1Q96BZ8 264 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-208ENST00000524652 PRIMPOLQ96LW4 560 aa5.94□□□□□ -1.46
CSDE1-208ENST00000524652 TPSG1Q9NRR2 321 aa5.94□□□□□ -1.46
CSDE1-208ENST00000524652 CXXC1Q9P0U4 656 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-208ENST00000524652 PTCD1O75127 700 aaKnown RBP5.93□□□□□ -1.46
CSDE1-208ENST00000524652 XYLBO75191 536 aa5.93□□□□□ -1.46
CSDE1-208ENST00000524652 HOXD8P13378 290 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-208ENST00000524652 BRD2P25440 801 aaKnown RBP5.93□□□□□ -1.46
CSDE1-208ENST00000524652 ITGB7P26010 798 aa5.93□□□□□ -1.46
CSDE1-208ENST00000524652 SOX18P35713 384 aa5.93□□□□□ -1.46
CSDE1-208ENST00000524652 MBTPS1Q14703 1052 aa5.93□□□□□ -1.46
CSDE1-208ENST00000524652 GRIK5Q16478 980 aa5.93□□□□□ -1.46
CSDE1-208ENST00000524652 ELMSAN1Q6PJG2 1045 aa5.93□□□□□ -1.46
CSDE1-208ENST00000524652 RGL4Q8IZJ4 473 aa5.93□□□□□ -1.46
CSDE1-208ENST00000524652 ZMYND15Q9H091 742 aa5.93□□□□□ -1.46
CSDE1-208ENST00000524652 SEMA6BQ9H3T3 888 aa5.93□□□□□ -1.46
CSDE1-208ENST00000524652 TLR7Q9NYK1 1049 aaKnown RBP5.93□□□□□ -1.46
CSDE1-208ENST00000524652 KCNMB2Q9Y691 235 aa5.93□□□□□ -1.46
CSDE1-208ENST00000524652 PLAURQ03405 335 aa5.92□□□□□ -1.46
CSDE1-208ENST00000524652 TMEM164Q5U3C3 297 aa5.92□□□□□ -1.46
CSDE1-208ENST00000524652 TXNRD3Q86VQ6 643 aa5.92□□□□□ -1.46
CSDE1-208ENST00000524652 ETFBKMTQ8IXQ9 262 aa5.92□□□□□ -1.46
CSDE1-208ENST00000524652 DMRTC2Q8IXT2 367 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-208ENST00000524652 CMTR1Q8N1G2 835 aaKnown RBP5.92□□□□□ -1.46
CSDE1-208ENST00000524652 PBXIP1Q96AQ6 731 aa5.92□□□□□ -1.46
CSDE1-208ENST00000524652 USP20Q9Y2K6 914 aa5.92□□□□□ -1.46
CSDE1-208ENST00000524652 ABCC9O60706 1549 aa5.91□□□□□ -1.46
CSDE1-208ENST00000524652 DYRK3O43781 588 aa5.91□□□□□ -1.46
CSDE1-208ENST00000524652 PSAPP07602 524 aa5.91□□□□□ -1.46
CSDE1-208ENST00000524652 EIF2AK2P19525 551 aaKnown RBP5.91□□□□□ -1.46
CSDE1-208ENST00000524652 MLLT1Q03111 559 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-208ENST00000524652 XP32Q5T750 250 aa5.91□□□□□ -1.46
CSDE1-208ENST00000524652 WFDC8Q8IUA0 241 aa5.91□□□□□ -1.46
CSDE1-208ENST00000524652 Q8N3U1 123 aa5.91□□□□□ -1.46
CSDE1-208ENST00000524652 CLP1Q92989 425 aaKnown RBP5.91□□□□□ -1.46
CSDE1-208ENST00000524652 CCDC97Q96F63 343 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-208ENST00000524652 SAP130Q9H0E3 1048 aa5.91□□□□□ -1.46
CSDE1-208ENST00000524652 FAM13BQ9NYF5 915 aa5.91□□□□□ -1.46
CSDE1-208ENST00000524652 MMP20O60882 483 aa5.9□□□□□ -1.46
CSDE1-208ENST00000524652 SHISA2Q6UWI4 295 aa5.9□□□□□ -1.46
CSDE1-208ENST00000524652 FBXO11Q86XK2 927 aa5.9□□□□□ -1.46
CSDE1-208ENST00000524652 MKNK1Q9BUB5 465 aa5.9□□□□□ -1.46
CSDE1-208ENST00000524652 SMG9Q9H0W8 520 aaKnown RBP5.9□□□□□ -1.46
CSDE1-208ENST00000524652 SERPINA10Q9UK55 444 aa5.9□□□□□ -1.46
CSDE1-208ENST00000524652 TNFRSF10BO14763 440 aa5.89□□□□□ -1.47
CSDE1-208ENST00000524652 H2AFB1P0C5Y9 115 aa5.89□□□□□ -1.47
CSDE1-208ENST00000524652 H2AFB2P0C5Z0 115 aa5.89□□□□□ -1.47
CSDE1-208ENST00000524652 TRIP4Q15650 581 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-208ENST00000524652 NLRP13Q86W25 1043 aa5.89□□□□□ -1.47
CSDE1-208ENST00000524652 RBSNQ9H1K0 784 aa5.89□□□□□ -1.47
CSDE1-208ENST00000524652 USP21Q9UK80 565 aa5.89□□□□□ -1.47
CSDE1-208ENST00000524652 LOC102724428A0A0B4J2F2 783 aa5.88□□□□□ -1.47
CSDE1-208ENST00000524652 GHRHP01286 108 aa5.88□□□□□ -1.47
CSDE1-208ENST00000524652 SIK1P57059 783 aa5.88□□□□□ -1.47
CSDE1-208ENST00000524652 FAM26DQ5JW98 314 aa5.88□□□□□ -1.47
CSDE1-208ENST00000524652 IGF2-ASQ6U949 168 aa5.88□□□□□ -1.47
CSDE1-208ENST00000524652 CAPN12Q6ZSI9 719 aa5.88□□□□□ -1.47
CSDE1-208ENST00000524652 HFE2Q6ZVN8 426 aa5.88□□□□□ -1.47
CSDE1-208ENST00000524652 ABTB2Q8N961 1025 aa5.88□□□□□ -1.47
CSDE1-208ENST00000524652 PIK3R5Q8WYR1 880 aa5.88□□□□□ -1.47
CSDE1-208ENST00000524652 PLD4Q96BZ4 506 aa5.88□□□□□ -1.47
CSDE1-208ENST00000524652 SRA1Q9HD15 236 aaKnown RBP5.88□□□□□ -1.47
CSDE1-208ENST00000524652 ZAP70P43403 619 aa5.87□□□□□ -1.47
CSDE1-208ENST00000524652 ZMYM1Q5SVZ6 1142 aa5.87□□□□□ -1.47
CSDE1-208ENST00000524652 CACTIN-AS1Q8N1I8 211 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms