RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 GPTP24298 496 aa11.1□□□□□ -0.63
CTNNA1-242ENST00000524292 ALDH1B1P30837 517 aa11.1□□□□□ -0.63
CTNNA1-242ENST00000524292 RPGRQ92834 1020 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-242ENST00000524292 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-242ENST00000524292 CACNA1SQ13698 1873 aa11.1□□□□□ -0.63
CTNNA1-242ENST00000524292 CCDC88AQ3V6T2 1871 aa11.09□□□□□ -0.63
CTNNA1-242ENST00000524292 SNPHO15079 494 aa11.09□□□□□ -0.63
CTNNA1-242ENST00000524292 PARP10Q53GL7 1025 aa11.09□□□□□ -0.63
CTNNA1-242ENST00000524292 GIGYF2Q6Y7W6 1299 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-242ENST00000524292 PPP1R42Q7Z4L9 355 aa11.09□□□□□ -0.63
CTNNA1-242ENST00000524292 NUTM1Q86Y26 1132 aa11.09□□□□□ -0.63
CTNNA1-242ENST00000524292 RTKN2Q8IZC4 609 aa11.09□□□□□ -0.63
CTNNA1-242ENST00000524292 LAS1LQ9Y4W2 734 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-242ENST00000524292 RIC1Q4ADV7 1423 aa11.09□□□□□ -0.63
CTNNA1-242ENST00000524292 ABCC12Q96J65 1359 aa11.08□□□□□ -0.64
CTNNA1-242ENST00000524292 NUP98P52948 1817 aa11.08□□□□□ -0.64
CTNNA1-242ENST00000524292 FKBP4Q02790 459 aaKnown RBP eCLIP11.08□□□□□ -0.64
CTNNA1-242ENST00000524292 CRY2Q49AN0 593 aa11.08□□□□□ -0.64
CTNNA1-242ENST00000524292 C7orf43Q8WVR3 580 aa11.08□□□□□ -0.64
CTNNA1-242ENST00000524292 PRKRIP1Q9H875 184 aaPredicted RBP11.08□□□□□ -0.64
CTNNA1-242ENST00000524292 ADAMTS8Q9UP79 889 aa11.08□□□□□ -0.64
CTNNA1-242ENST00000524292 UBN2Q6ZU65 1347 aa11.08□□□□□ -0.64
CTNNA1-242ENST00000524292 DICER1Q9UPY3 1922 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-242ENST00000524292 CHL1O00533 1208 aa11.07□□□□□ -0.64
CTNNA1-242ENST00000524292 HSP90AB3PQ58FF7 597 aa11.07□□□□□ -0.64
CTNNA1-242ENST00000524292 ZNF34Q8IZ26 560 aa11.07□□□□□ -0.64
CTNNA1-242ENST00000524292 WDR90Q96KV7 1748 aa11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 IQCA1LA6NCM1 817 aa11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 NTSR2O95665 410 aa11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 HOXB7P09629 217 aa11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 CALD1Q05682 793 aaKnown RBP11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 PDIA6Q15084 440 aa11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 GRIPAP1Q4V328 841 aa11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 SUSD4Q5VX71 490 aa11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 CC2D2BQ6DHV5 1058 aa11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 NECTIN2Q92692 538 aa11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 RBM17Q96I25 401 aaKnown RBP11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 UTP14AQ9BVJ6 771 aaKnown RBP11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 TMX4Q9H1E5 349 aaPredicted RBP11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 ZNF277Q9NRM2 450 aaPredicted RBP11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 RNF123Q5XPI4 1314 aa11.06□□□□□ -0.64
CTNNA1-242ENST00000524292 ANXA1P04083 346 aa11.05□□□□□ -0.64
CTNNA1-242ENST00000524292 HOXA10P31260 410 aaPredicted RBP11.05□□□□□ -0.64
CTNNA1-242ENST00000524292 AIMP1Q12904 312 aaKnown RBP11.05□□□□□ -0.64
CTNNA1-242ENST00000524292 PROSER3Q2NL68 480 aa11.05□□□□□ -0.64
CTNNA1-242ENST00000524292 HDGFL1Q5TGJ6 251 aa11.05□□□□□ -0.64
CTNNA1-242ENST00000524292 COPS6Q7L5N1 327 aa11.05□□□□□ -0.64
CTNNA1-242ENST00000524292 LRP10Q7Z4F1 713 aa11.05□□□□□ -0.64
CTNNA1-242ENST00000524292 XAGE3Q8WTP9 111 aa11.05□□□□□ -0.64
CTNNA1-242ENST00000524292 DDX21Q9NR30 783 aaKnown RBP eCLIP11.05□□□□□ -0.64
CTNNA1-242ENST00000524292 PPEF1O14829 653 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-242ENST00000524292 DDNO94850 711 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-242ENST00000524292 IARSP41252 1262 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-242ENST00000524292 OLFM4Q6UX06 510 aa11.04□□□□□ -0.64
CTNNA1-242ENST00000524292 JDP2Q8WYK2 163 aa11.04□□□□□ -0.64
CTNNA1-242ENST00000524292 FAM163AQ96GL9 167 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-242ENST00000524292 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
CTNNA1-242ENST00000524292 NLRP3Q96P20 1036 aa11.04□□□□□ -0.64
CTNNA1-242ENST00000524292 CRAMP1Q96RY5 1269 aa11.04□□□□□ -0.64
CTNNA1-242ENST00000524292 PSMD1Q99460 953 aa11.04□□□□□ -0.64
CTNNA1-242ENST00000524292 C2orf72A6NCS6 295 aa11.03□□□□□ -0.64
CTNNA1-242ENST00000524292 POTECB2RU33 542 aa11.03□□□□□ -0.64
CTNNA1-242ENST00000524292 ZEB1P37275 1124 aaPredicted RBP11.03□□□□□ -0.64
CTNNA1-242ENST00000524292 KRT24Q2M2I5 525 aa11.03□□□□□ -0.64
CTNNA1-242ENST00000524292 SYNE4Q8N205 404 aa11.03□□□□□ -0.64
CTNNA1-242ENST00000524292 DNAJC5GQ8N7S2 189 aa11.03□□□□□ -0.64
CTNNA1-242ENST00000524292 SPRYD3Q8NCJ5 442 aa11.03□□□□□ -0.64
CTNNA1-242ENST00000524292 TMC2Q8TDI7 906 aa11.03□□□□□ -0.64
CTNNA1-242ENST00000524292 KLRG1Q96E93 195 aa11.03□□□□□ -0.64
CTNNA1-242ENST00000524292 CHPF2Q9P2E5 772 aa11.03□□□□□ -0.64
CTNNA1-242ENST00000524292 DBF4Q9UBU7 674 aaPredicted RBP11.03□□□□□ -0.64
CTNNA1-242ENST00000524292 APAF1O14727 1248 aa11.02□□□□□ -0.65
CTNNA1-242ENST00000524292 HTRA3P83110 453 aa11.02□□□□□ -0.65
CTNNA1-242ENST00000524292 TCIRG1Q13488 830 aa11.02□□□□□ -0.65
CTNNA1-242ENST00000524292 NLRP10Q86W26 655 aa11.02□□□□□ -0.65
CTNNA1-242ENST00000524292 HYPKQ9NX55 129 aa11.02□□□□□ -0.65
CTNNA1-242ENST00000524292 TRMT112Q9UI30 125 aaKnown RBP11.02□□□□□ -0.65
CTNNA1-242ENST00000524292 SH3TC1Q8TE82 1336 aa11.02□□□□□ -0.65
CTNNA1-242ENST00000524292 ZNF541Q9H0D2 1346 aa11.02□□□□□ -0.65
CTNNA1-242ENST00000524292 ANKRD36CQ5JPF3 1778 aa11.01□□□□□ -0.65
CTNNA1-242ENST00000524292 GNAI1P63096 354 aa11.01□□□□□ -0.65
CTNNA1-242ENST00000524292 SLC10A5Q5PT55 438 aa11.01□□□□□ -0.65
CTNNA1-242ENST00000524292 DUSP27Q5VZP5 1158 aa11.01□□□□□ -0.65
CTNNA1-242ENST00000524292 LDHDQ86WU2 507 aa11.01□□□□□ -0.65
CTNNA1-242ENST00000524292 LARGE2Q8N3Y3 721 aa11.01□□□□□ -0.65
CTNNA1-242ENST00000524292 PLBD2Q8NHP8 589 aa11.01□□□□□ -0.65
CTNNA1-242ENST00000524292 CHMP4AQ9BY43 222 aa11.01□□□□□ -0.65
CTNNA1-242ENST00000524292 MBIPQ9NS73 344 aa11.01□□□□□ -0.65
CTNNA1-242ENST00000524292 IFT57Q9NWB7 429 aa11.01□□□□□ -0.65
CTNNA1-242ENST00000524292 HACL1Q9UJ83 578 aa11.01□□□□□ -0.65
CTNNA1-242ENST00000524292 SNED1Q8TER0 1413 aa11.01□□□□□ -0.65
CTNNA1-242ENST00000524292 FZD9O00144 591 aa11□□□□□ -0.65
CTNNA1-242ENST00000524292 TCERG1O14776 1098 aaKnown RBP11□□□□□ -0.65
CTNNA1-242ENST00000524292 HCLS1P14317 486 aaPredicted RBP11□□□□□ -0.65
CTNNA1-242ENST00000524292 EIF6P56537 245 aaKnown RBP11□□□□□ -0.65
CTNNA1-242ENST00000524292 LCE2DQ5TA82 110 aaPredicted RBP11□□□□□ -0.65
CTNNA1-242ENST00000524292 ANKRD13DQ6ZTN6 518 aa11□□□□□ -0.65
CTNNA1-242ENST00000524292 DDX46Q7L014 1031 aaKnown RBP11□□□□□ -0.65
CTNNA1-242ENST00000524292 GPC2Q8N158 579 aa11□□□□□ -0.65
CTNNA1-242ENST00000524292 TAF1DQ9H5J8 278 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms