RNA–Protein interactions for RNA: ENST00000523464.1

EBF1-210, Transcript of early B cell factor 1, humanhuman

TSL 3

Gene EBF1, Length 766 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-210ENST00000523464 KIAA2012Q0VF49 1180 aa12.32□□□□□ -0.44
EBF1-210ENST00000523464 DPP8Q6V1X1 898 aaPredicted RBP12.32□□□□□ -0.44
EBF1-210ENST00000523464 DDX46Q7L014 1031 aaKnown RBP12.32□□□□□ -0.44
EBF1-210ENST00000523464 MPNDQ8N594 471 aa12.32□□□□□ -0.44
EBF1-210ENST00000523464 GPR101Q96P66 508 aaPredicted RBP12.32□□□□□ -0.44
EBF1-210ENST00000523464 HOXB7P09629 217 aa12.31□□□□□ -0.44
EBF1-210ENST00000523464 HSPA8P11142 646 aaKnown RBP12.31□□□□□ -0.44
EBF1-210ENST00000523464 CXCL9Q07325 125 aa12.31□□□□□ -0.44
EBF1-210ENST00000523464 TCIRG1Q13488 830 aa12.31□□□□□ -0.44
EBF1-210ENST00000523464 CAPNS2Q96L46 248 aa12.31□□□□□ -0.44
EBF1-210ENST00000523464 SH3TC1Q8TE82 1336 aa12.31□□□□□ -0.44
EBF1-210ENST00000523464 ANKRD36CQ5JPF3 1778 aa12.3□□□□□ -0.44
EBF1-210ENST00000523464 COL4A5P29400 1685 aa12.3□□□□□ -0.44
EBF1-210ENST00000523464 HSP90B1P14625 803 aaKnown RBP12.3□□□□□ -0.44
EBF1-210ENST00000523464 EIF2S2P20042 333 aaKnown RBP12.3□□□□□ -0.44
EBF1-210ENST00000523464 TMPOP42166 694 aaKnown RBP12.3□□□□□ -0.44
EBF1-210ENST00000523464 GRAPQ13588 217 aa12.3□□□□□ -0.44
EBF1-210ENST00000523464 AOC3Q16853 763 aa12.3□□□□□ -0.44
EBF1-210ENST00000523464 CST9Q5W186 159 aa12.3□□□□□ -0.44
EBF1-210ENST00000523464 CIAPIN1Q6FI81 312 aa12.3□□□□□ -0.44
EBF1-210ENST00000523464 NLRP10Q86W26 655 aa12.3□□□□□ -0.44
EBF1-210ENST00000523464 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
EBF1-210ENST00000523464 DPF2Q92785 391 aa12.3□□□□□ -0.44
EBF1-210ENST00000523464 THUMPD2Q9BTF0 503 aaKnown RBP12.3□□□□□ -0.44
EBF1-210ENST00000523464 ABCC4O15439 1325 aa12.3□□□□□ -0.44
EBF1-210ENST00000523464 THSD7BQ9C0I4 1608 aa12.29□□□□□ -0.44
EBF1-210ENST00000523464 CHL1O00533 1208 aa12.29□□□□□ -0.44
EBF1-210ENST00000523464 CDC37L1Q7L3B6 337 aa12.29□□□□□ -0.44
EBF1-210ENST00000523464 COPS6Q7L5N1 327 aa12.29□□□□□ -0.44
EBF1-210ENST00000523464 SAPCD2Q86UD0 394 aa12.29□□□□□ -0.44
EBF1-210ENST00000523464 CHMP4AQ9BY43 222 aa12.29□□□□□ -0.44
EBF1-210ENST00000523464 TRMT112Q9UI30 125 aaKnown RBP12.29□□□□□ -0.44
EBF1-210ENST00000523464 LTBP1Q14766 1721 aa12.28□□□□□ -0.44
EBF1-210ENST00000523464 H7C1D1 291 aa12.28□□□□□ -0.44
EBF1-210ENST00000523464 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
EBF1-210ENST00000523464 TRIM28Q13263 835 aaKnown RBP12.28□□□□□ -0.44
EBF1-210ENST00000523464 C3orf67Q6ZVT6 689 aa12.28□□□□□ -0.44
EBF1-210ENST00000523464 ABHD8Q96I13 439 aa12.28□□□□□ -0.44
EBF1-210ENST00000523464 BCL2L13Q9BXK5 485 aa12.28□□□□□ -0.44
EBF1-210ENST00000523464 TCERG1O14776 1098 aaKnown RBP12.27□□□□□ -0.45
EBF1-210ENST00000523464 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
EBF1-210ENST00000523464 GMPSP49915 693 aaPredicted RBP12.27□□□□□ -0.45
EBF1-210ENST00000523464 SF3B3Q15393 1217 aaKnown RBP12.27□□□□□ -0.45
EBF1-210ENST00000523464 PLBD2Q8NHP8 589 aa12.27□□□□□ -0.45
EBF1-210ENST00000523464 XAGE3Q8WTP9 111 aa12.27□□□□□ -0.45
EBF1-210ENST00000523464 DBF4Q9UBU7 674 aaPredicted RBP12.27□□□□□ -0.45
EBF1-210ENST00000523464 CELF2O95319 508 aaKnown RBP12.26□□□□□ -0.45
EBF1-210ENST00000523464 HCLS1P14317 486 aaPredicted RBP12.26□□□□□ -0.45
EBF1-210ENST00000523464 DSG3P32926 999 aa12.26□□□□□ -0.45
EBF1-210ENST00000523464 RGS19P49795 217 aa12.26□□□□□ -0.45
EBF1-210ENST00000523464 NOGQ13253 232 aa12.26□□□□□ -0.45
EBF1-210ENST00000523464 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
EBF1-210ENST00000523464 CYP4F22Q6NT55 531 aa12.26□□□□□ -0.45
EBF1-210ENST00000523464 ANKRD13DQ6ZTN6 518 aa12.26□□□□□ -0.45
EBF1-210ENST00000523464 PAXIP1Q6ZW49 1069 aaPredicted RBP12.26□□□□□ -0.45
EBF1-210ENST00000523464 HYPKQ9NX55 129 aa12.26□□□□□ -0.45
EBF1-210ENST00000523464 CNOT7Q9UIV1 285 aaKnown RBP12.26□□□□□ -0.45
EBF1-210ENST00000523464 TRAF5O00463 557 aa12.25□□□□□ -0.45
EBF1-210ENST00000523464 AIMP1Q12904 312 aaKnown RBP12.25□□□□□ -0.45
EBF1-210ENST00000523464 PROSER3Q2NL68 480 aa12.25□□□□□ -0.45
EBF1-210ENST00000523464 EYA3Q99504 573 aa12.25□□□□□ -0.45
EBF1-210ENST00000523464 RAD17O75943 681 aa12.24□□□□□ -0.45
EBF1-210ENST00000523464 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
EBF1-210ENST00000523464 RUNDC1Q96C34 613 aa12.24□□□□□ -0.45
EBF1-210ENST00000523464 ISCA1Q9BUE6 129 aa12.24□□□□□ -0.45
EBF1-210ENST00000523464 LAMB2P55268 1798 aa12.23□□□□□ -0.45
EBF1-210ENST00000523464 ANXA1P04083 346 aa12.23□□□□□ -0.45
EBF1-210ENST00000523464 HIRAP54198 1017 aaPredicted RBP12.23□□□□□ -0.45
EBF1-210ENST00000523464 HDGFL1Q5TGJ6 251 aa12.23□□□□□ -0.45
EBF1-210ENST00000523464 REM2Q8IYK8 340 aaPredicted RBP12.23□□□□□ -0.45
EBF1-210ENST00000523464 CCDC102AQ96A19 550 aa12.23□□□□□ -0.45
EBF1-210ENST00000523464 CFAP44Q96MT7 982 aa12.23□□□□□ -0.45
EBF1-210ENST00000523464 GLIS2Q9BZE0 524 aaPredicted RBP12.23□□□□□ -0.45
EBF1-210ENST00000523464 LRRC37AA6NMS7 1700 aa12.23□□□□□ -0.45
EBF1-210ENST00000523464 MYBBP1AQ9BQG0 1328 aaKnown RBP12.22□□□□□ -0.45
EBF1-210ENST00000523464 YDJCA8MPS7 323 aa12.22□□□□□ -0.45
EBF1-210ENST00000523464 RPS8P62241 208 aaKnown RBP12.22□□□□□ -0.45
EBF1-210ENST00000523464 CALD1Q05682 793 aaKnown RBP12.22□□□□□ -0.45
EBF1-210ENST00000523464 FMR1Q06787 632 aaKnown RBP eCLIP12.22□□□□□ -0.45
EBF1-210ENST00000523464 PODXL2Q9NZ53 605 aa12.22□□□□□ -0.45
EBF1-210ENST00000523464 CHPF2Q9P2E5 772 aa12.22□□□□□ -0.45
EBF1-210ENST00000523464 NSFL1CQ9UNZ2 370 aaKnown RBP12.22□□□□□ -0.45
EBF1-210ENST00000523464 CACNB1Q02641 598 aaPredicted RBP12.21□□□□□ -0.45
EBF1-210ENST00000523464 WDR43Q15061 677 aaKnown RBP eCLIP12.21□□□□□ -0.45
EBF1-210ENST00000523464 MICALL2Q8IY33 904 aa12.21□□□□□ -0.45
EBF1-210ENST00000523464 C2orf69Q8N8R5 385 aa12.21□□□□□ -0.45
EBF1-210ENST00000523464 DCPSQ96C86 337 aaKnown RBP12.21□□□□□ -0.45
EBF1-210ENST00000523464 ZC3H12CQ9C0D7 883 aaKnown RBP12.21□□□□□ -0.45
EBF1-210ENST00000523464 SAGE1Q9NXZ1 904 aa12.21□□□□□ -0.45
EBF1-210ENST00000523464 TRIM35Q9UPQ4 493 aa12.21□□□□□ -0.45
EBF1-210ENST00000523464 C6orf229H3BNL8 230 aa12.2□□□□□ -0.46
EBF1-210ENST00000523464 PSMD14O00487 310 aa12.2□□□□□ -0.46
EBF1-210ENST00000523464 IRS4O14654 1257 aaPredicted RBP12.2□□□□□ -0.46
EBF1-210ENST00000523464 AOC2O75106 756 aa12.2□□□□□ -0.46
EBF1-210ENST00000523464 VIL1P09327 827 aaKnown RBP12.2□□□□□ -0.46
EBF1-210ENST00000523464 MMP14P50281 582 aa12.2□□□□□ -0.46
EBF1-210ENST00000523464 HUNKP57058 714 aa12.2□□□□□ -0.46
EBF1-210ENST00000523464 MLLT1Q03111 559 aaPredicted RBP12.2□□□□□ -0.46
EBF1-210ENST00000523464 GRM1Q13255 1194 aa12.2□□□□□ -0.46
EBF1-210ENST00000523464 KRT26Q7Z3Y9 468 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms