RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 SETBP1Q9Y6X0 1596 aa10.5□□□□□ -0.73
CSMD1-212ENST00000523387 C11orf57Q6ZUT1 292 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-212ENST00000523387 C10orf67Q8IYJ2 551 aa10.5□□□□□ -0.73
CSMD1-212ENST00000523387 CCDC191Q8NCU4 936 aa10.5□□□□□ -0.73
CSMD1-212ENST00000523387 NEK11Q8NG66 645 aa10.5□□□□□ -0.73
CSMD1-212ENST00000523387 MRPS27Q92552 414 aaKnown RBP10.5□□□□□ -0.73
CSMD1-212ENST00000523387 ARFGAP3Q9NP61 516 aa10.5□□□□□ -0.73
CSMD1-212ENST00000523387 CPSF1Q10570 1443 aaKnown RBP10.5□□□□□ -0.73
CSMD1-212ENST00000523387 ACEP12821 1306 aa10.5□□□□□ -0.73
CSMD1-212ENST00000523387 KRBA2Q6ZNG9 492 aa10.5□□□□□ -0.73
CSMD1-212ENST00000523387 FUCA2Q9BTY2 467 aa10.5□□□□□ -0.73
CSMD1-212ENST00000523387 POLR3DP05423 398 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-212ENST00000523387 CPLX2Q6PUV4 134 aaKnown RBP10.5□□□□□ -0.73
CSMD1-212ENST00000523387 ST7Q9NRC1 585 aa10.5□□□□□ -0.73
CSMD1-212ENST00000523387 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.5□□□□□ -0.73
CSMD1-212ENST00000523387 PLA2G4DQ86XP0 818 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 CARD6Q9BX69 1037 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 MAP3K19Q56UN5 1328 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 GLI2P10070 1586 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 A0A1B0GVL5 298 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 EIF3JO75822 258 aaKnown RBP10.49□□□□□ -0.73
CSMD1-212ENST00000523387 SLFN14P0C7P3 912 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 EVCP57679 992 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 FAM160A1Q05DH4 1040 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 RALYLQ86SE5 291 aaKnown RBP10.49□□□□□ -0.73
CSMD1-212ENST00000523387 KLHL34Q8N239 644 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 PI4K2BQ8TCG2 481 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 CCDC102AQ96A19 550 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 ACBD3Q9H3P7 528 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 U3KPZ7 1027 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-212ENST00000523387 UBASH3AP57075 661 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 TRIM29Q14134 588 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 HOOK1Q9UJC3 728 aaKnown RBP10.49□□□□□ -0.73
CSMD1-212ENST00000523387 MAP3K2Q9Y2U5 619 aa10.49□□□□□ -0.73
CSMD1-212ENST00000523387 ERLIN1O75477 346 aa10.48□□□□□ -0.73
CSMD1-212ENST00000523387 GTF2E1P29083 439 aaPredicted RBP10.48□□□□□ -0.73
CSMD1-212ENST00000523387 WASHC4Q2M389 1173 aa10.48□□□□□ -0.73
CSMD1-212ENST00000523387 C8orf76Q96K31 380 aa10.48□□□□□ -0.73
CSMD1-212ENST00000523387 EYA1Q99502 592 aa10.48□□□□□ -0.73
CSMD1-212ENST00000523387 SRRTQ9BXP5 876 aaKnown RBP10.48□□□□□ -0.73
CSMD1-212ENST00000523387 COL3A1P02461 1466 aaPredicted RBP10.48□□□□□ -0.73
CSMD1-212ENST00000523387 BTBD11A6QL63 1104 aa10.48□□□□□ -0.73
CSMD1-212ENST00000523387 CDC25BP30305 580 aa10.48□□□□□ -0.73
CSMD1-212ENST00000523387 IRX5P78411 483 aaPredicted RBP10.48□□□□□ -0.73
CSMD1-212ENST00000523387 HSP90AA4PQ58FG1 418 aa10.48□□□□□ -0.73
CSMD1-212ENST00000523387 MCM6Q14566 821 aa10.48□□□□□ -0.73
CSMD1-212ENST00000523387 ZNF530Q6P9A1 599 aaPredicted RBP10.48□□□□□ -0.73
CSMD1-212ENST00000523387 UTP14AQ9BVJ6 771 aaKnown RBP10.48□□□□□ -0.73
CSMD1-212ENST00000523387 XPO4Q9C0E2 1151 aaKnown RBP10.48□□□□□ -0.73
CSMD1-212ENST00000523387 RASSF4Q9H2L5 321 aa10.48□□□□□ -0.73
CSMD1-212ENST00000523387 PTPDC1A2A3K4 754 aa10.47□□□□□ -0.73
CSMD1-212ENST00000523387 DHX16O60231 1041 aaKnown RBP10.47□□□□□ -0.73
CSMD1-212ENST00000523387 JAKMIP3Q5VZ66 844 aa10.47□□□□□ -0.73
CSMD1-212ENST00000523387 STK11IPQ8N1F8 1099 aa10.47□□□□□ -0.73
CSMD1-212ENST00000523387 ARHGEF40Q8TER5 1519 aa10.47□□□□□ -0.73
CSMD1-212ENST00000523387 PES1O00541 588 aaKnown RBP10.47□□□□□ -0.73
CSMD1-212ENST00000523387 ADGRB3O60242 1522 aa10.47□□□□□ -0.73
CSMD1-212ENST00000523387 TUBB4AP04350 444 aa10.47□□□□□ -0.73
CSMD1-212ENST00000523387 CLCN6P51797 869 aa10.47□□□□□ -0.73
CSMD1-212ENST00000523387 ABTB2Q8N961 1025 aa10.47□□□□□ -0.73
CSMD1-212ENST00000523387 JMYQ8N9B5 988 aa10.47□□□□□ -0.73
CSMD1-212ENST00000523387 HNRNPH2P55795 449 aaKnown RBP10.47□□□□□ -0.73
CSMD1-212ENST00000523387 OAS2P29728 719 aaKnown RBP10.46□□□□□ -0.73
CSMD1-212ENST00000523387 TRDNQ13061 729 aa10.46□□□□□ -0.73
CSMD1-212ENST00000523387 CCDC12Q8WUD4 166 aaPredicted RBP10.46□□□□□ -0.73
CSMD1-212ENST00000523387 ABCC3O15438 1527 aa10.46□□□□□ -0.73
CSMD1-212ENST00000523387 AATKQ6ZMQ8 1374 aa10.46□□□□□ -0.73
CSMD1-212ENST00000523387 HMGB1P09429 215 aaKnown RBP10.46□□□□□ -0.73
CSMD1-212ENST00000523387 ATP2B1P20020 1258 aa10.46□□□□□ -0.73
CSMD1-212ENST00000523387 APOBRQ0VD83 1088 aa10.46□□□□□ -0.73
CSMD1-212ENST00000523387 IMPACTQ9P2X3 320 aa10.46□□□□□ -0.73
CSMD1-212ENST00000523387 DBF4Q9UBU7 674 aaPredicted RBP10.46□□□□□ -0.73
CSMD1-212ENST00000523387 NRXN1Q9ULB1 1477 aa10.46□□□□□ -0.74
CSMD1-212ENST00000523387 A0A0D9SFI3 127 aa10.46□□□□□ -0.74
CSMD1-212ENST00000523387 CWF19L2Q2TBE0 894 aaKnown RBP10.46□□□□□ -0.74
CSMD1-212ENST00000523387 RAB11FIP4Q86YS3 637 aa10.46□□□□□ -0.74
CSMD1-212ENST00000523387 PGBD1Q96JS3 809 aa10.46□□□□□ -0.74
CSMD1-212ENST00000523387 FTOQ9C0B1 505 aaKnown RBP eCLIP10.46□□□□□ -0.74
CSMD1-212ENST00000523387 CDK12Q9NYV4 1490 aaPredicted RBP10.46□□□□□ -0.74
CSMD1-212ENST00000523387 ASXL2Q76L83 1435 aa10.46□□□□□ -0.74
CSMD1-212ENST00000523387 MYL6BP14649 208 aa10.45□□□□□ -0.74
CSMD1-212ENST00000523387 DDX46Q7L014 1031 aaKnown RBP10.45□□□□□ -0.74
CSMD1-212ENST00000523387 PPP1R13BQ96KQ4 1090 aa10.45□□□□□ -0.74
CSMD1-212ENST00000523387 USP28Q96RU2 1077 aa10.45□□□□□ -0.74
CSMD1-212ENST00000523387 TOMM22Q9NS69 142 aa10.45□□□□□ -0.74
CSMD1-212ENST00000523387 APPP05067 770 aa10.45□□□□□ -0.74
CSMD1-212ENST00000523387 PNMA6AP0CW24 399 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-212ENST00000523387 ETF1P62495 437 aaKnown RBP10.45□□□□□ -0.74
CSMD1-212ENST00000523387 NFXL1Q6ZNB6 911 aa10.45□□□□□ -0.74
CSMD1-212ENST00000523387 PPFIBP1Q86W92 1011 aa10.45□□□□□ -0.74
CSMD1-212ENST00000523387 ADGRB1O14514 1584 aa10.45□□□□□ -0.74
CSMD1-212ENST00000523387 SEC31AO94979 1220 aaKnown RBP10.45□□□□□ -0.74
CSMD1-212ENST00000523387 ZSCAN26Q16670 478 aa10.45□□□□□ -0.74
CSMD1-212ENST00000523387 KIF4BQ2VIQ3 1234 aa10.45□□□□□ -0.74
CSMD1-212ENST00000523387 CCDC129Q6ZRS4 1044 aa10.45□□□□□ -0.74
CSMD1-212ENST00000523387 CAPN2P17655 700 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 CHST3Q7LGC8 479 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 MAP4K1Q92918 833 aa10.44□□□□□ -0.74
CSMD1-212ENST00000523387 NCOA5Q9HCD5 579 aaKnown RBP10.44□□□□□ -0.74
CSMD1-212ENST00000523387 RSPH14Q9UHP6 348 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms