RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 SIRT2Q8IXJ6 389 aa32■■■□□ 2.71
NKX2-1-204ENST00000522719 SPON1Q9HCB6 807 aa32■■■□□ 2.71
NKX2-1-204ENST00000522719 PPP4R2Q9NY27 417 aa32■■■□□ 2.71
NKX2-1-204ENST00000522719 KIF13BQ9NQT8 1826 aa32■■■□□ 2.71
NKX2-1-204ENST00000522719 RTL9Q8NET4 1388 aa32■■■□□ 2.71
NKX2-1-204ENST00000522719 KLRG2A4D1S0 409 aaPredicted RBP32■■■□□ 2.71
NKX2-1-204ENST00000522719 PDE6BP35913 854 aa32■■■□□ 2.71
NKX2-1-204ENST00000522719 SSH3Q8TE77 659 aa32■■■□□ 2.71
NKX2-1-204ENST00000522719 PNMA6EA0A0J9YXQ4 647 aa31.99■■■□□ 2.71
NKX2-1-204ENST00000522719 PTGER2P43116 358 aa31.99■■■□□ 2.71
NKX2-1-204ENST00000522719 POLA2Q14181 598 aa31.99■■■□□ 2.71
NKX2-1-204ENST00000522719 CHMP3Q9Y3E7 222 aa31.99■■■□□ 2.71
NKX2-1-204ENST00000522719 C10orf71Q711Q0 1435 aa31.98■■■□□ 2.71
NKX2-1-204ENST00000522719 HDAC1Q13547 482 aaPredicted RBP31.98■■■□□ 2.71
NKX2-1-204ENST00000522719 C3orf67Q6ZVT6 689 aa31.98■■■□□ 2.71
NKX2-1-204ENST00000522719 GTF3C3Q9Y5Q9 886 aa31.98■■■□□ 2.71
NKX2-1-204ENST00000522719 CRY2Q49AN0 593 aa31.97■■■□□ 2.71
NKX2-1-204ENST00000522719 RWDD1Q9H446 243 aaPredicted RBP31.97■■■□□ 2.71
NKX2-1-204ENST00000522719 PDZRN3Q9UPQ7 1066 aa31.97■■■□□ 2.71
NKX2-1-204ENST00000522719 IFIT5Q13325 482 aaKnown RBP31.96■■■□□ 2.71
NKX2-1-204ENST00000522719 CCDC57Q2TAC2 916 aa31.96■■■□□ 2.71
NKX2-1-204ENST00000522719 GREM2Q9H772 168 aa31.96■■■□□ 2.71
NKX2-1-204ENST00000522719 FAM161AQ3B820 660 aa31.95■■■□□ 2.71
NKX2-1-204ENST00000522719 CCDC85AQ96PX6 553 aaPredicted RBP31.94■■■□□ 2.7
NKX2-1-204ENST00000522719 ANKRD18BA2A2Z9 1011 aa31.93■■■□□ 2.7
NKX2-1-204ENST00000522719 ITGA6P23229 1130 aa31.93■■■□□ 2.7
NKX2-1-204ENST00000522719 CCDC136Q96JN2 1154 aa31.93■■■□□ 2.7
NKX2-1-204ENST00000522719 RFX5P48382 616 aaPredicted RBP31.92■■■□□ 2.7
NKX2-1-204ENST00000522719 RPGRQ92834 1020 aaKnown RBP31.92■■■□□ 2.7
NKX2-1-204ENST00000522719 DDX46Q7L014 1031 aaKnown RBP31.91■■■□□ 2.7
NKX2-1-204ENST00000522719 COPRSQ9NQ92 184 aa31.91■■■□□ 2.7
NKX2-1-204ENST00000522719 COL11A2P13942 1736 aaPredicted RBP31.9■■■□□ 2.7
NKX2-1-204ENST00000522719 TAF1P21675 1872 aa31.9■■■□□ 2.7
NKX2-1-204ENST00000522719 HOXA10P31260 410 aaPredicted RBP31.9■■■□□ 2.7
NKX2-1-204ENST00000522719 CDC5LQ99459 802 aaKnown RBP31.9■■■□□ 2.7
NKX2-1-204ENST00000522719 SRGNP10124 158 aa31.89■■■□□ 2.7
NKX2-1-204ENST00000522719 PTPN12Q05209 780 aaKnown RBP31.89■■■□□ 2.7
NKX2-1-204ENST00000522719 RBM17Q96I25 401 aaKnown RBP31.89■■■□□ 2.7
NKX2-1-204ENST00000522719 H0YIN7 160 aa31.88■■■□□ 2.69
NKX2-1-204ENST00000522719 IGHDP01880 384 aa31.88■■■□□ 2.69
NKX2-1-204ENST00000522719 NPR1P16066 1061 aa31.88■■■□□ 2.69
NKX2-1-204ENST00000522719 SEC31BQ9NQW1 1179 aa31.88■■■□□ 2.69
NKX2-1-204ENST00000522719 DLEC1Q9Y238 1755 aa31.88■■■□□ 2.69
NKX2-1-204ENST00000522719 TAF7LQ5H9L4 462 aa31.87■■■□□ 2.69
NKX2-1-204ENST00000522719 CRAMP1Q96RY5 1269 aa31.87■■■□□ 2.69
NKX2-1-204ENST00000522719 DCTPP1Q9H773 170 aa31.87■■■□□ 2.69
NKX2-1-204ENST00000522719 FBXO3Q9UK99 471 aa31.87■■■□□ 2.69
NKX2-1-204ENST00000522719 NOP58Q9Y2X3 529 aaKnown RBP31.87■■■□□ 2.69
NKX2-1-204ENST00000522719 CD2APQ9Y5K6 639 aa31.87■■■□□ 2.69
NKX2-1-204ENST00000522719 C2CD5Q86YS7 1000 aa31.86■■■□□ 2.69
NKX2-1-204ENST00000522719 MASTLQ96GX5 879 aa31.86■■■□□ 2.69
NKX2-1-204ENST00000522719 SPEF2Q9C093 1822 aa31.86■■■□□ 2.69
NKX2-1-204ENST00000522719 TGFB2P61812 414 aa31.85■■■□□ 2.69
NKX2-1-204ENST00000522719 HSP90AB4PQ58FF6 505 aa31.85■■■□□ 2.69
NKX2-1-204ENST00000522719 SURF6O75683 361 aaKnown RBP31.84■■■□□ 2.69
NKX2-1-204ENST00000522719 IGHMBP2P38935 993 aaKnown RBP31.84■■■□□ 2.69
NKX2-1-204ENST00000522719 GCC1Q96CN9 775 aa31.84■■■□□ 2.69
NKX2-1-204ENST00000522719 PA2G4Q9UQ80 394 aaKnown RBP31.84■■■□□ 2.69
NKX2-1-204ENST00000522719 ALDH1B1P30837 517 aa31.83■■■□□ 2.69
NKX2-1-204ENST00000522719 GRAPQ13588 217 aa31.83■■■□□ 2.69
NKX2-1-204ENST00000522719 STYK1Q6J9G0 422 aa31.83■■■□□ 2.69
NKX2-1-204ENST00000522719 B4GALNT3Q6L9W6 998 aa31.83■■■□□ 2.69
NKX2-1-204ENST00000522719 ANKRD18AQ8IVF6 992 aa31.83■■■□□ 2.69
NKX2-1-204ENST00000522719 KLHDC4Q8TBB5 520 aa31.83■■■□□ 2.69
NKX2-1-204ENST00000522719 GRAPLQ8TC17 118 aaPredicted RBP31.83■■■□□ 2.69
NKX2-1-204ENST00000522719 ZNF594Q96JF6 807 aaPredicted RBP31.83■■■□□ 2.69
NKX2-1-204ENST00000522719 LRP5O75197 1615 aa31.83■■■□□ 2.69
NKX2-1-204ENST00000522719 KIAA1551Q9HCM1 1747 aa31.83■■■□□ 2.69
NKX2-1-204ENST00000522719 RPS8P62241 208 aaKnown RBP31.83■■■□□ 2.69
NKX2-1-204ENST00000522719 CIAO1O76071 339 aa31.82■■■□□ 2.68
NKX2-1-204ENST00000522719 G3BP1Q13283 466 aaKnown RBP eCLIP31.82■■■□□ 2.68
NKX2-1-204ENST00000522719 MPHOSPH8Q99549 860 aa31.82■■■□□ 2.68
NKX2-1-204ENST00000522719 EYA2O00167 538 aa31.81■■■□□ 2.68
NKX2-1-204ENST00000522719 LDHAL6AQ6ZMR3 332 aa31.81■■■□□ 2.68
NKX2-1-204ENST00000522719 CENPQQ7L2Z9 268 aaPredicted RBP31.81■■■□□ 2.68
NKX2-1-204ENST00000522719 SMC5Q8IY18 1101 aa31.81■■■□□ 2.68
NKX2-1-204ENST00000522719 CELF1Q92879 486 aaKnown RBP31.81■■■□□ 2.68
NKX2-1-204ENST00000522719 KDM2BQ8NHM5 1336 aa31.8■■■□□ 2.68
NKX2-1-204ENST00000522719 RAB11FIP3O75154 756 aa31.8■■■□□ 2.68
NKX2-1-204ENST00000522719 SIL1Q9H173 461 aa31.8■■■□□ 2.68
NKX2-1-204ENST00000522719 BSDC1Q9NW68 430 aaPredicted RBP31.8■■■□□ 2.68
NKX2-1-204ENST00000522719 EXOC6BQ9Y2D4 811 aa31.8■■■□□ 2.68
NKX2-1-204ENST00000522719 COL4A1P02462 1669 aa31.79■■■□□ 2.68
NKX2-1-204ENST00000522719 BBOX1O75936 387 aa31.79■■■□□ 2.68
NKX2-1-204ENST00000522719 CHRNA5P30532 468 aa31.79■■■□□ 2.68
NKX2-1-204ENST00000522719 CACNA1SQ13698 1873 aa31.79■■■□□ 2.68
NKX2-1-204ENST00000522719 CNKSR1Q969H4 720 aa31.79■■■□□ 2.68
NKX2-1-204ENST00000522719 IL15P40933 162 aaPredicted RBP31.78■■■□□ 2.68
NKX2-1-204ENST00000522719 TMC4Q7Z404 712 aa31.78■■■□□ 2.68
NKX2-1-204ENST00000522719 ERC1Q8IUD2 1116 aa31.78■■■□□ 2.68
NKX2-1-204ENST00000522719 ZNF622Q969S3 477 aaKnown RBP eCLIP31.78■■■□□ 2.68
NKX2-1-204ENST00000522719 PPP1R1BQ9UD71 204 aaPredicted RBP31.78■■■□□ 2.68
NKX2-1-204ENST00000522719 OS9Q13438 667 aaPredicted RBP31.77■■■□□ 2.68
NKX2-1-204ENST00000522719 CNNM1Q9NRU3 951 aa31.77■■■□□ 2.68
NKX2-1-204ENST00000522719 DPEP1P16444 411 aa31.76■■■□□ 2.68
NKX2-1-204ENST00000522719 ATG9AQ7Z3C6 839 aa31.76■■■□□ 2.68
NKX2-1-204ENST00000522719 PUS3Q9BZE2 481 aaKnown RBP31.76■■■□□ 2.68
NKX2-1-204ENST00000522719 RIPOR2Q9Y4F9 1068 aa31.76■■■□□ 2.68
NKX2-1-204ENST00000522719 BRCA1P38398 1863 aaKnown RBP31.76■■■□□ 2.67
NKX2-1-204ENST00000522719 LRRC24Q50LG9 513 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms