RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 PCDH11XQ9BZA7 1347 aa11.04□□□□□ -0.64
PVT1-213ENST00000522414 PCDH11YQ9BZA8 1340 aa11.04□□□□□ -0.64
PVT1-213ENST00000522414 POLD1P28340 1107 aa11.03□□□□□ -0.64
PVT1-213ENST00000522414 GPR162Q16538 588 aa11.03□□□□□ -0.64
PVT1-213ENST00000522414 MSL1Q68DK7 614 aa11.03□□□□□ -0.64
PVT1-213ENST00000522414 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
PVT1-213ENST00000522414 EIF4A2Q14240 407 aaKnown RBP11.02□□□□□ -0.65
PVT1-213ENST00000522414 AMIGO3Q86WK7 504 aa11.02□□□□□ -0.65
PVT1-213ENST00000522414 NLGN2Q8NFZ4 835 aa11.02□□□□□ -0.65
PVT1-213ENST00000522414 SPG7Q9UQ90 795 aa11.02□□□□□ -0.65
PVT1-213ENST00000522414 TUBGCP6Q96RT7 1819 aa11.02□□□□□ -0.65
PVT1-213ENST00000522414 Q3C1V9 767 aa11.01□□□□□ -0.65
PVT1-213ENST00000522414 GRIPAP1Q4V328 841 aa11.01□□□□□ -0.65
PVT1-213ENST00000522414 RC3H1Q5TC82 1133 aaKnown RBP11.01□□□□□ -0.65
PVT1-213ENST00000522414 HLA-CQ95604 372 aa11.01□□□□□ -0.65
PVT1-213ENST00000522414 USB1Q9BQ65 265 aaKnown RBP11.01□□□□□ -0.65
PVT1-213ENST00000522414 ASAP1Q9ULH1 1129 aa11.01□□□□□ -0.65
PVT1-213ENST00000522414 PALLDQ8WX93 1383 aa11.01□□□□□ -0.65
PVT1-213ENST00000522414 TOGARAM1Q9Y4F4 1720 aa11.01□□□□□ -0.65
PVT1-213ENST00000522414 CD46P15529 392 aa11□□□□□ -0.65
PVT1-213ENST00000522414 ZNF784Q8NCA9 323 aaPredicted RBP11□□□□□ -0.65
PVT1-213ENST00000522414 PHKG2P15735 406 aa10.99□□□□□ -0.65
PVT1-213ENST00000522414 IFNL2Q8IZJ0 200 aa10.99□□□□□ -0.65
PVT1-213ENST00000522414 SMARCC1Q92922 1105 aaPredicted RBP10.99□□□□□ -0.65
PVT1-213ENST00000522414 REPIN1Q9BWE0 567 aaKnown RBP10.99□□□□□ -0.65
PVT1-213ENST00000522414 MAP2P11137 1827 aaKnown RBP10.99□□□□□ -0.65
PVT1-213ENST00000522414 LOC102724428A0A0B4J2F2 783 aa10.98□□□□□ -0.65
PVT1-213ENST00000522414 LORP23490 312 aaPredicted RBP10.98□□□□□ -0.65
PVT1-213ENST00000522414 SIK1P57059 783 aa10.98□□□□□ -0.65
PVT1-213ENST00000522414 SMYD5Q6GMV2 418 aa10.98□□□□□ -0.65
PVT1-213ENST00000522414 MORC1Q86VD1 984 aa10.98□□□□□ -0.65
PVT1-213ENST00000522414 LINC00116Q8NCU8 138 aa10.98□□□□□ -0.65
PVT1-213ENST00000522414 KIFC2Q96AC6 838 aa10.98□□□□□ -0.65
PVT1-213ENST00000522414 ATG3Q9NT62 314 aa10.98□□□□□ -0.65
PVT1-213ENST00000522414 TMOD3Q9NYL9 352 aa10.98□□□□□ -0.65
PVT1-213ENST00000522414 MAP3K5Q99683 1374 aa10.98□□□□□ -0.65
PVT1-213ENST00000522414 ITPK1Q13572 414 aa10.97□□□□□ -0.65
PVT1-213ENST00000522414 CCDC24Q8N4L8 307 aa10.97□□□□□ -0.65
PVT1-213ENST00000522414 AK7Q96M32 723 aa10.97□□□□□ -0.65
PVT1-213ENST00000522414 TAF1LQ8IZX4 1826 aa10.97□□□□□ -0.65
PVT1-213ENST00000522414 ITGB4P16144 1822 aa10.96□□□□□ -0.65
PVT1-213ENST00000522414 YBX3P16989 372 aaKnown RBP eCLIP10.96□□□□□ -0.653e-7■□□□□ 10.3
PVT1-213ENST00000522414 AEBP1Q8IUX7 1158 aa10.96□□□□□ -0.65
PVT1-213ENST00000522414 FLAD1Q8NFF5 587 aa10.96□□□□□ -0.65
PVT1-213ENST00000522414 C5P01031 1676 aa10.95□□□□□ -0.66
PVT1-213ENST00000522414 KDM4AO75164 1064 aa10.95□□□□□ -0.66
PVT1-213ENST00000522414 WNT7BP56706 349 aa10.95□□□□□ -0.66
PVT1-213ENST00000522414 SLC4A9Q96Q91 983 aa10.95□□□□□ -0.66
PVT1-213ENST00000522414 KNSTRNQ9Y448 316 aa10.95□□□□□ -0.66
PVT1-213ENST00000522414 PLEKHO1Q53GL0 409 aaPredicted RBP10.94□□□□□ -0.66
PVT1-213ENST00000522414 SULT6B1Q6IMI4 303 aa10.94□□□□□ -0.66
PVT1-213ENST00000522414 WWC3Q9ULE0 1092 aa10.94□□□□□ -0.66
PVT1-213ENST00000522414 ZNF831Q5JPB2 1677 aa10.94□□□□□ -0.66
PVT1-213ENST00000522414 IGSF1Q8N6C5 1336 aa10.93□□□□□ -0.66
PVT1-213ENST00000522414 ERVV-2B6SEH9 535 aa10.93□□□□□ -0.66
PVT1-213ENST00000522414 ALDH1A1P00352 501 aa10.93□□□□□ -0.66
PVT1-213ENST00000522414 HMGB2P26583 209 aaKnown RBP10.93□□□□□ -0.66
PVT1-213ENST00000522414 GMPRP36959 345 aa10.93□□□□□ -0.66
PVT1-213ENST00000522414 ZNF530Q6P9A1 599 aaPredicted RBP10.93□□□□□ -0.66
PVT1-213ENST00000522414 TRIM46Q7Z4K8 759 aa10.93□□□□□ -0.66
PVT1-213ENST00000522414 CD2APQ9Y5K6 639 aa10.93□□□□□ -0.66
PVT1-213ENST00000522414 SIAH2O43255 324 aa10.92□□□□□ -0.66
PVT1-213ENST00000522414 BMP1P13497 986 aa10.92□□□□□ -0.66
PVT1-213ENST00000522414 IL13P35225 146 aa10.92□□□□□ -0.66
PVT1-213ENST00000522414 MTHFSP49914 203 aa10.92□□□□□ -0.66
PVT1-213ENST00000522414 CABP4P57796 275 aa10.92□□□□□ -0.66
PVT1-213ENST00000522414 CNGB1Q14028 1251 aaPredicted RBP10.92□□□□□ -0.66
PVT1-213ENST00000522414 NFATC2IPQ8NCF5 419 aa10.92□□□□□ -0.66
PVT1-213ENST00000522414 DCAF5Q96JK2 942 aa10.92□□□□□ -0.66
PVT1-213ENST00000522414 NXF1Q9UBU9 619 aaKnown RBP10.92□□□□□ -0.66
PVT1-213ENST00000522414 GRIN3BO60391 1043 aa10.91□□□□□ -0.66
PVT1-213ENST00000522414 PTCD1O75127 700 aaKnown RBP10.91□□□□□ -0.66
PVT1-213ENST00000522414 SSFA2P28290 1259 aa10.91□□□□□ -0.66
PVT1-213ENST00000522414 GUCA2AQ02747 115 aa10.91□□□□□ -0.66
PVT1-213ENST00000522414 AMOTQ4VCS5 1084 aa10.91□□□□□ -0.66
PVT1-213ENST00000522414 TRAPPC3LQ5T215 181 aa10.91□□□□□ -0.66
PVT1-213ENST00000522414 CICQ96RK0 1608 aaPredicted RBP10.91□□□□□ -0.66
PVT1-213ENST00000522414 KIF7Q2M1P5 1343 aa10.9□□□□□ -0.66
PVT1-213ENST00000522414 UBR3Q6ZT12 1888 aa10.9□□□□□ -0.66
PVT1-213ENST00000522414 PER1O15534 1290 aaPredicted RBP10.9□□□□□ -0.66
PVT1-213ENST00000522414 HSP90AB1P08238 724 aaKnown RBP10.9□□□□□ -0.66
PVT1-213ENST00000522414 CC2D1BQ5T0F9 858 aaKnown RBP10.9□□□□□ -0.66
PVT1-213ENST00000522414 PTCRAQ6ISU1 281 aaPredicted RBP10.9□□□□□ -0.66
PVT1-213ENST00000522414 GPIHBP1Q8IV16 184 aa10.9□□□□□ -0.66
PVT1-213ENST00000522414 SYMPKQ92797 1274 aaKnown RBP10.9□□□□□ -0.66
PVT1-213ENST00000522414 C4BP0C0L5 1744 aa10.89□□□□□ -0.67
PVT1-213ENST00000522414 HOXA2O43364 376 aa10.89□□□□□ -0.67
PVT1-213ENST00000522414 HMOX1P09601 288 aa10.89□□□□□ -0.67
PVT1-213ENST00000522414 VEGFBP49765 207 aa10.89□□□□□ -0.67
PVT1-213ENST00000522414 C1orf141Q5JVX7 400 aa10.89□□□□□ -0.67
PVT1-213ENST00000522414 LGR6Q9HBX8 967 aa10.89□□□□□ -0.67
PVT1-213ENST00000522414 RTCBQ9Y3I0 505 aaKnown RBP10.89□□□□□ -0.67
PVT1-213ENST00000522414 CHD4Q14839 1912 aa10.89□□□□□ -0.67
PVT1-213ENST00000522414 MMP10P09238 476 aa10.88□□□□□ -0.67
PVT1-213ENST00000522414 C1QTNF8P60827 252 aa10.88□□□□□ -0.67
PVT1-213ENST00000522414 KDRP35968 1356 aa10.88□□□□□ -0.67
PVT1-213ENST00000522414 KDM6AO15550 1401 aaPredicted RBP10.87□□□□□ -0.67
PVT1-213ENST00000522414 RPS6KA4O75676 772 aa10.87□□□□□ -0.67
PVT1-213ENST00000522414 JUNDP17535 347 aa10.87□□□□□ -0.67
PVT1-213ENST00000522414 COL5A3P25940 1745 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms