RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 SMIM5Q71RC9 77 aa7.24□□□□□ -1.25
CTNNA1-232ENST00000522013 RETREG3Q86VR2 466 aa7.24□□□□□ -1.25
CTNNA1-232ENST00000522013 ARHGEF25Q86VW2 580 aa7.24□□□□□ -1.25
CTNNA1-232ENST00000522013 KCTD17Q8N5Z5 321 aa7.24□□□□□ -1.25
CTNNA1-232ENST00000522013 PPP1R12CQ9BZL4 782 aa7.24□□□□□ -1.25
CTNNA1-232ENST00000522013 ANKRD36BQ8N2N9 1353 aa7.23□□□□□ -1.25
CTNNA1-232ENST00000522013 ACTN4O43707 911 aaKnown RBP7.23□□□□□ -1.25
CTNNA1-232ENST00000522013 RNF19BQ6ZMZ0 732 aa7.23□□□□□ -1.25
CTNNA1-232ENST00000522013 NBPF3Q9H094 633 aa7.23□□□□□ -1.25
CTNNA1-232ENST00000522013 CASP8AP2Q9UKL3 1982 aa7.22□□□□□ -1.25
CTNNA1-232ENST00000522013 ITGB4P16144 1822 aa7.22□□□□□ -1.25
CTNNA1-232ENST00000522013 FAM208AQ9UK61 1670 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-232ENST00000522013 NFAT5O94916 1531 aa7.22□□□□□ -1.25
CTNNA1-232ENST00000522013 NSD2O96028 1365 aa7.22□□□□□ -1.25
CTNNA1-232ENST00000522013 CARNS1A5YM72 827 aa7.22□□□□□ -1.25
CTNNA1-232ENST00000522013 PALM3A6NDB9 673 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-232ENST00000522013 RGS19P49795 217 aa7.22□□□□□ -1.25
CTNNA1-232ENST00000522013 KMT5BQ4FZB7 885 aa7.22□□□□□ -1.25
CTNNA1-232ENST00000522013 BLOC1S3Q6QNY0 202 aa7.22□□□□□ -1.25
CTNNA1-232ENST00000522013 KCNH5Q8NCM2 988 aa7.22□□□□□ -1.25
CTNNA1-232ENST00000522013 CNTNAP1P78357 1384 aa7.2□□□□□ -1.26
CTNNA1-232ENST00000522013 NSD3Q9BZ95 1437 aa7.2□□□□□ -1.26
CTNNA1-232ENST00000522013 MMP10P09238 476 aa7.2□□□□□ -1.26
CTNNA1-232ENST00000522013 HSPA8P11142 646 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-232ENST00000522013 VEGFAP15692 232 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-232ENST00000522013 DPEP1P16444 411 aa7.2□□□□□ -1.26
CTNNA1-232ENST00000522013 TGFB2P61812 414 aa7.2□□□□□ -1.26
CTNNA1-232ENST00000522013 ANKRD13DQ6ZTN6 518 aa7.2□□□□□ -1.26
CTNNA1-232ENST00000522013 AMIGO3Q86WK7 504 aa7.2□□□□□ -1.26
CTNNA1-232ENST00000522013 LRCH3Q96II8 777 aa7.2□□□□□ -1.26
CTNNA1-232ENST00000522013 TFIP11Q9UBB9 837 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-232ENST00000522013 C4AP0C0L4 1744 aa7.2□□□□□ -1.26
CTNNA1-232ENST00000522013 DICER1Q9UPY3 1922 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-232ENST00000522013 TK2O00142 265 aa7.19□□□□□ -1.26
CTNNA1-232ENST00000522013 LMOD1P29536 600 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-232ENST00000522013 DESI1Q6ICB0 168 aa7.19□□□□□ -1.26
CTNNA1-232ENST00000522013 LYPD8Q6UX82 237 aa7.19□□□□□ -1.26
CTNNA1-232ENST00000522013 TBC1D9Q6ZT07 1266 aa7.19□□□□□ -1.26
CTNNA1-232ENST00000522013 NPM2Q86SE8 214 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-232ENST00000522013 MRPL50Q8N5N7 158 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-232ENST00000522013 ANKRD24Q8TF21 1146 aa7.19□□□□□ -1.26
CTNNA1-232ENST00000522013 RNF166Q96A37 237 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-232ENST00000522013 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-232ENST00000522013 PALLDQ8WX93 1383 aa7.19□□□□□ -1.26
CTNNA1-232ENST00000522013 HRO43593 1189 aa7.18□□□□□ -1.26
CTNNA1-232ENST00000522013 HMGB2P26583 209 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-232ENST00000522013 VEGFBP49765 207 aa7.18□□□□□ -1.26
CTNNA1-232ENST00000522013 RASSF7Q02833 373 aa7.18□□□□□ -1.26
CTNNA1-232ENST00000522013 Q3C1V9 767 aa7.18□□□□□ -1.26
CTNNA1-232ENST00000522013 ADGRD1Q6QNK2 874 aa7.18□□□□□ -1.26
CTNNA1-232ENST00000522013 PPARGC1BQ86YN6 1023 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-232ENST00000522013 CABP1Q9NZU7 370 aa7.18□□□□□ -1.26
CTNNA1-232ENST00000522013 MAFBQ9Y5Q3 323 aaPredicted RBP7.18□□□□□ -1.26
CTNNA1-232ENST00000522013 F12P00748 615 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-232ENST00000522013 FBXO45P0C2W1 286 aa7.17□□□□□ -1.26
CTNNA1-232ENST00000522013 CDCA8Q53HL2 280 aa7.17□□□□□ -1.26
CTNNA1-232ENST00000522013 BRICD5Q6PL45 260 aa7.17□□□□□ -1.26
CTNNA1-232ENST00000522013 LTV1Q96GA3 475 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-232ENST00000522013 CCDC87Q9NVE4 849 aa7.17□□□□□ -1.26
CTNNA1-232ENST00000522013 WBP1LQ9NX94 342 aa7.17□□□□□ -1.26
CTNNA1-232ENST00000522013 MAP10Q9P2G4 905 aa7.17□□□□□ -1.26
CTNNA1-232ENST00000522013 GLTPD2A6NH11 291 aa7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 PIK3CDO00329 1044 aa7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 SSFA2P28290 1259 aa7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 SOX11P35716 441 aa7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 BCAMP50895 628 aa7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 SEMA3FQ13275 785 aa7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 DALRD3Q5D0E6 543 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 DCAF11Q8TEB1 546 aa7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 THAP11Q96EK4 314 aa7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 DCAF5Q96JK2 942 aa7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 MPHOSPH9Q99550 1183 aa7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 USB1Q9BQ65 265 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 GZF1Q9H116 711 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 PIM2Q9P1W9 311 aa7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 USTQ9Y2C2 406 aa7.16□□□□□ -1.26
CTNNA1-232ENST00000522013 MON2Q7Z3U7 1717 aa7.15□□□□□ -1.26
CTNNA1-232ENST00000522013 MAP2P11137 1827 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-232ENST00000522013 NR1H3Q13133 447 aa7.15□□□□□ -1.26
CTNNA1-232ENST00000522013 MPRIPQ6WCQ1 1025 aa7.15□□□□□ -1.26
CTNNA1-232ENST00000522013 ZCRB1Q8TBF4 217 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-232ENST00000522013 HPS5Q9UPZ3 1129 aa7.15□□□□□ -1.26
CTNNA1-232ENST00000522013 TTC21BQ7Z4L5 1316 aa7.15□□□□□ -1.26
CTNNA1-232ENST00000522013 ZC3H4Q9UPT8 1303 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-232ENST00000522013 CACNA1SQ13698 1873 aa7.15□□□□□ -1.27
CTNNA1-232ENST00000522013 MEGF6O75095 1541 aa7.14□□□□□ -1.27
CTNNA1-232ENST00000522013 MAP2K1Q02750 393 aaPredicted RBP7.14□□□□□ -1.27
CTNNA1-232ENST00000522013 SCUBE3Q8IX30 993 aa7.14□□□□□ -1.27
CTNNA1-232ENST00000522013 FKBPLQ9UIM3 349 aa7.14□□□□□ -1.27
CTNNA1-232ENST00000522013 PARP3Q9Y6F1 533 aa7.14□□□□□ -1.27
CTNNA1-232ENST00000522013 DLEC1Q9Y238 1755 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 TTC21AQ8NDW8 1320 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 SOWAHBA6NEL2 793 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 TMEM88BA6NKF7 163 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 ZBBXA8MT70 800 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 ATP9BO43861 1147 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 JUNDP17535 347 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 LMNB1P20700 586 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 KCNA3P22001 575 aa7.13□□□□□ -1.27
CTNNA1-232ENST00000522013 EIF4G2P78344 907 aaKnown RBP eCLIP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms