RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TRAF1Q13077 416 aa18.74■□□□□ 0.59
USP42-207ENST00000521713 TMEM266Q2M3C6 531 aa18.74■□□□□ 0.59
USP42-207ENST00000521713 KIF18AQ8NI77 898 aa18.74■□□□□ 0.59
USP42-207ENST00000521713 CCNL1Q9UK58 526 aaPredicted RBP18.74■□□□□ 0.59
USP42-207ENST00000521713 MAP3K11Q16584 847 aa18.73■□□□□ 0.59
USP42-207ENST00000521713 PTPN14Q15678 1187 aa18.73■□□□□ 0.59
USP42-207ENST00000521713 WDR78Q5VTH9 848 aa18.73■□□□□ 0.59
USP42-207ENST00000521713 NAA16Q6N069 864 aaPredicted RBP18.73■□□□□ 0.59
USP42-207ENST00000521713 CCDC82Q8N4S0 544 aa18.73■□□□□ 0.59
USP42-207ENST00000521713 IARSP41252 1262 aaKnown RBP18.73■□□□□ 0.59
USP42-207ENST00000521713 STK32BQ9NY57 414 aa18.73■□□□□ 0.59
USP42-207ENST00000521713 KRT23Q9C075 422 aa18.72■□□□□ 0.59
USP42-207ENST00000521713 INCENPQ9NQS7 918 aa18.72■□□□□ 0.59
USP42-207ENST00000521713 SYCE3A1L190 88 aa18.72■□□□□ 0.59
USP42-207ENST00000521713 PDE1AP54750 535 aa18.72■□□□□ 0.59
USP42-207ENST00000521713 CBX1P83916 185 aa18.72■□□□□ 0.59
USP42-207ENST00000521713 CCDC183Q5T5S1 534 aa18.72■□□□□ 0.59
USP42-207ENST00000521713 TMTC2Q8N394 836 aa18.72■□□□□ 0.59
USP42-207ENST00000521713 USP16Q9Y5T5 823 aa18.72■□□□□ 0.59
USP42-207ENST00000521713 ERICH4A6NGS2 130 aa18.72■□□□□ 0.59
USP42-207ENST00000521713 TSPYL6Q8N831 410 aa18.72■□□□□ 0.59
USP42-207ENST00000521713 CNNM2Q9H8M5 875 aa18.71■□□□□ 0.59
USP42-207ENST00000521713 NSFL1CQ9UNZ2 370 aaKnown RBP18.71■□□□□ 0.59
USP42-207ENST00000521713 PLCG2P16885 1265 aa18.71■□□□□ 0.59
USP42-207ENST00000521713 TTLL5Q6EMB2 1281 aa18.71■□□□□ 0.59
USP42-207ENST00000521713 MBD5Q9P267 1494 aa18.71■□□□□ 0.59
USP42-207ENST00000521713 MLH3Q9UHC1 1453 aa18.71■□□□□ 0.59
USP42-207ENST00000521713 PPP1R12BO60237 982 aaPredicted RBP18.71■□□□□ 0.58
USP42-207ENST00000521713 PPP4R3AQ6IN85 833 aa18.71■□□□□ 0.58
USP42-207ENST00000521713 PAXIP1Q6ZW49 1069 aaPredicted RBP18.71■□□□□ 0.58
USP42-207ENST00000521713 JDP2Q8WYK2 163 aa18.71■□□□□ 0.58
USP42-207ENST00000521713 HAND2P61296 217 aa18.7■□□□□ 0.58
USP42-207ENST00000521713 PLBD2Q8NHP8 589 aa18.7■□□□□ 0.58
USP42-207ENST00000521713 ESR2Q92731 530 aa18.7■□□□□ 0.58
USP42-207ENST00000521713 ZSCAN12O43309 604 aa18.7■□□□□ 0.58
USP42-207ENST00000521713 MCM3P25205 808 aa18.7■□□□□ 0.58
USP42-207ENST00000521713 CWF19L2Q2TBE0 894 aaKnown RBP18.7■□□□□ 0.58
USP42-207ENST00000521713 TTC41PQ6P2S7 1318 aa18.7■□□□□ 0.58
USP42-207ENST00000521713 IGHDP01880 384 aa18.7■□□□□ 0.58
USP42-207ENST00000521713 GIMAP7Q8NHV1 300 aa18.7■□□□□ 0.58
USP42-207ENST00000521713 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.69■□□□□ 0.583e-6■■■■■ 84.9
USP42-207ENST00000521713 MCMDC2Q4G0Z9 681 aa18.69■□□□□ 0.58
USP42-207ENST00000521713 MYO5CQ9NQX4 1742 aa18.69■□□□□ 0.58
USP42-207ENST00000521713 BAG4O95429 457 aaKnown RBP18.69■□□□□ 0.58
USP42-207ENST00000521713 UVSSAQ2YD98 709 aa18.69■□□□□ 0.58
USP42-207ENST00000521713 SLC9C2Q5TAH2 1124 aa18.69■□□□□ 0.58
USP42-207ENST00000521713 SLC52A2Q9HAB3 445 aa18.69■□□□□ 0.58
USP42-207ENST00000521713 SH3TC1Q8TE82 1336 aa18.69■□□□□ 0.58
USP42-207ENST00000521713 USP21Q9UK80 565 aa18.69■□□□□ 0.58
USP42-207ENST00000521713 METAP2P50579 478 aaKnown RBP eCLIP18.68■□□□□ 0.58
USP42-207ENST00000521713 TSHZ3Q63HK5 1081 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 KRI1Q8N9T8 703 aaKnown RBP18.68■□□□□ 0.58
USP42-207ENST00000521713 CNBD1Q8NA66 436 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 SLC4A4Q9Y6R1 1079 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 KAT6BQ8WYB5 2073 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 CCT2P78371 535 aaKnown RBP18.68■□□□□ 0.58
USP42-207ENST00000521713 CCDC181Q5TID7 509 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 STX8Q9UNK0 236 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 IQSEC3Q9UPP2 1182 aaPredicted RBP18.68■□□□□ 0.58
USP42-207ENST00000521713 SHTN1A0MZ66 631 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 GNAT2P19087 354 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 KRT24Q2M2I5 525 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 MAP9Q49MG5 647 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 CCDC102AQ96A19 550 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 PCDHB15Q9Y5E8 787 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 PLEKHG1Q9ULL1 1385 aa18.68■□□□□ 0.58
USP42-207ENST00000521713 KIF20AO95235 890 aa18.67■□□□□ 0.58
USP42-207ENST00000521713 SDSP20132 328 aa18.67■□□□□ 0.58
USP42-207ENST00000521713 MATR3P43243 847 aaKnown RBP eCLIP18.67■□□□□ 0.58
USP42-207ENST00000521713 GNAQP50148 359 aa18.67■□□□□ 0.58
USP42-207ENST00000521713 FAM98CQ17RN3 349 aaKnown RBP18.67■□□□□ 0.58
USP42-207ENST00000521713 WTAPQ15007 396 aa18.67■□□□□ 0.58
USP42-207ENST00000521713 MICU3Q86XE3 530 aa18.67■□□□□ 0.58
USP42-207ENST00000521713 RBM17Q96I25 401 aaKnown RBP18.67■□□□□ 0.58
USP42-207ENST00000521713 ORC3Q9UBD5 711 aaPredicted RBP18.67■□□□□ 0.58
USP42-207ENST00000521713 PTPRTO14522 1441 aa18.67■□□□□ 0.58
USP42-207ENST00000521713 DCTPP1Q9H773 170 aa18.66■□□□□ 0.58
USP42-207ENST00000521713 PAG1Q9NWQ8 432 aa18.66■□□□□ 0.58
USP42-207ENST00000521713 TSPY3P0CV98 308 aa18.66■□□□□ 0.58
USP42-207ENST00000521713 TSPY8P0CW00 308 aa18.66■□□□□ 0.58
USP42-207ENST00000521713 SFPQP23246 707 aaKnown RBP eCLIP18.66■□□□□ 0.58
USP42-207ENST00000521713 PA2G4Q9UQ80 394 aaKnown RBP18.66■□□□□ 0.58
USP42-207ENST00000521713 CHL1O00533 1208 aa18.66■□□□□ 0.58
USP42-207ENST00000521713 PRIM1P49642 420 aaKnown RBP18.66■□□□□ 0.58
USP42-207ENST00000521713 TBC1D2Q9BYX2 928 aa18.66■□□□□ 0.58
USP42-207ENST00000521713 TRIM21P19474 475 aaKnown RBP18.65■□□□□ 0.58
USP42-207ENST00000521713 CEP85Q6P2H3 762 aa18.65■□□□□ 0.58
USP42-207ENST00000521713 MPHOSPH6Q99547 160 aaKnown RBP18.65■□□□□ 0.58
USP42-207ENST00000521713 METTL22Q9BUU2 404 aaPredicted RBP18.65■□□□□ 0.58
USP42-207ENST00000521713 EFCAB6Q5THR3 1501 aa18.65■□□□□ 0.58
USP42-207ENST00000521713 GUCY1B3Q02153 619 aa18.65■□□□□ 0.58
USP42-207ENST00000521713 PRDM10Q9NQV6 1147 aa18.65■□□□□ 0.58
USP42-207ENST00000521713 POTEB2H3BUK9 544 aa18.65■□□□□ 0.58
USP42-207ENST00000521713 PAF1Q8N7H5 531 aa18.65■□□□□ 0.58
USP42-207ENST00000521713 KLHL40Q2TBA0 621 aa18.65■□□□□ 0.58
USP42-207ENST00000521713 CRACR2AQ9BSW2 395 aa18.65■□□□□ 0.58
USP42-207ENST00000521713 TMEM94Q12767 1356 aa18.65■□□□□ 0.58
USP42-207ENST00000521713 SBNO2Q9Y2G9 1366 aa18.65■□□□□ 0.58
USP42-207ENST00000521713 F8W031 263 aaPredicted RBP18.64■□□□□ 0.58
USP42-207ENST00000521713 DNAI2Q9GZS0 605 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 275.9 ms