RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 MAP3K9P80192 1104 aa14.89□□□□□ -0.03
CSMD1-210ENST00000521646 ERFEQ4G0M1 354 aa14.89□□□□□ -0.03
CSMD1-210ENST00000521646 CNBD1Q8NA66 436 aa14.89□□□□□ -0.03
CSMD1-210ENST00000521646 LTBP3Q9NS15 1303 aa14.89□□□□□ -0.03
CSMD1-210ENST00000521646 PPP2R1AP30153 589 aa14.88□□□□□ -0.03
CSMD1-210ENST00000521646 PDE6BP35913 854 aa14.88□□□□□ -0.03
CSMD1-210ENST00000521646 HLFQ16534 295 aa14.88□□□□□ -0.03
CSMD1-210ENST00000521646 MIS18AQ9NYP9 233 aa14.88□□□□□ -0.03
CSMD1-210ENST00000521646 ZNF541Q9H0D2 1346 aa14.88□□□□□ -0.03
CSMD1-210ENST00000521646 ADAMTSL1Q8N6G6 1762 aa14.88□□□□□ -0.03
CSMD1-210ENST00000521646 HSPA1AP0DMV8 641 aaKnown RBP14.87□□□□□ -0.03
CSMD1-210ENST00000521646 HSPA1BP0DMV9 641 aaKnown RBP14.87□□□□□ -0.03
CSMD1-210ENST00000521646 STYK1Q6J9G0 422 aa14.87□□□□□ -0.03
CSMD1-210ENST00000521646 SETDB2Q96T68 719 aa14.87□□□□□ -0.03
CSMD1-210ENST00000521646 DLG5Q8TDM6 1919 aa14.87□□□□□ -0.03
CSMD1-210ENST00000521646 ABCC12Q96J65 1359 aa14.86□□□□□ -0.03
CSMD1-210ENST00000521646 KLRG2A4D1S0 409 aaPredicted RBP14.86□□□□□ -0.03
CSMD1-210ENST00000521646 TEX13AQ9BXU3 409 aaPredicted RBP14.86□□□□□ -0.03
CSMD1-210ENST00000521646 TAOK3Q9H2K8 898 aa14.86□□□□□ -0.03
CSMD1-210ENST00000521646 LAMB4A4D0S4 1761 aa14.85□□□□□ -0.03
CSMD1-210ENST00000521646 KDM3BQ7LBC6 1761 aa14.85□□□□□ -0.03
CSMD1-210ENST00000521646 LTBP1Q14766 1721 aa14.85□□□□□ -0.03
CSMD1-210ENST00000521646 ANKRD13DQ6ZTN6 518 aa14.84□□□□□ -0.03
CSMD1-210ENST00000521646 MASTLQ96GX5 879 aa14.84□□□□□ -0.03
CSMD1-210ENST00000521646 THUMPD2Q9BTF0 503 aaKnown RBP14.84□□□□□ -0.03
CSMD1-210ENST00000521646 ZNF277Q9NRM2 450 aaPredicted RBP14.84□□□□□ -0.03
CSMD1-210ENST00000521646 PASKQ96RG2 1323 aa14.84□□□□□ -0.03
CSMD1-210ENST00000521646 FAM177BA6PVY3 158 aa14.83□□□□□ -0.04
CSMD1-210ENST00000521646 U2AF1L5P0DN76 240 aaPredicted RBP14.83□□□□□ -0.04
CSMD1-210ENST00000521646 U2AF1Q01081 240 aaKnown RBP eCLIP14.83□□□□□ -0.04
CSMD1-210ENST00000521646 CNKSR1Q969H4 720 aa14.83□□□□□ -0.04
CSMD1-210ENST00000521646 EMILIN3Q9NT22 766 aa14.83□□□□□ -0.04
CSMD1-210ENST00000521646 MKRN1Q9UHC7 482 aaKnown RBP14.83□□□□□ -0.04
CSMD1-210ENST00000521646 EVI5O60447 810 aa14.82□□□□□ -0.04
CSMD1-210ENST00000521646 SNRPA1P09661 255 aaKnown RBP14.82□□□□□ -0.04
CSMD1-210ENST00000521646 MMRN1Q13201 1228 aa14.82□□□□□ -0.04
CSMD1-210ENST00000521646 NBPF5PQ86XG9 351 aaPredicted RBP14.82□□□□□ -0.04
CSMD1-210ENST00000521646 NUP98P52948 1817 aa14.82□□□□□ -0.04
CSMD1-210ENST00000521646 ITGBL1O95965 494 aaPredicted RBP14.81□□□□□ -0.04
CSMD1-210ENST00000521646 ST5P78524 1137 aa14.81□□□□□ -0.04
CSMD1-210ENST00000521646 PPP4R3BQ5MIZ7 849 aa14.81□□□□□ -0.04
CSMD1-210ENST00000521646 CLEC4GQ6UXB4 293 aa14.81□□□□□ -0.04
CSMD1-210ENST00000521646 TAF1DQ9H5J8 278 aaPredicted RBP14.81□□□□□ -0.04
CSMD1-210ENST00000521646 NIP7Q9Y221 180 aaKnown RBP eCLIP14.81□□□□□ -0.04
CSMD1-210ENST00000521646 UBN2Q6ZU65 1347 aa14.81□□□□□ -0.04
CSMD1-210ENST00000521646 SCN4AP35499 1836 aa14.8□□□□□ -0.04
CSMD1-210ENST00000521646 PBX2P40425 430 aa14.8□□□□□ -0.04
CSMD1-210ENST00000521646 TTLL7Q6ZT98 887 aa14.8□□□□□ -0.04
CSMD1-210ENST00000521646 NUTM1Q86Y26 1132 aa14.8□□□□□ -0.04
CSMD1-210ENST00000521646 TNS4Q8IZW8 715 aa14.8□□□□□ -0.04
CSMD1-210ENST00000521646 PLEKHF1Q96S99 279 aa14.8□□□□□ -0.04
CSMD1-210ENST00000521646 WDR70Q9NW82 654 aa14.8□□□□□ -0.04
CSMD1-210ENST00000521646 PDZRN3Q9UPQ7 1066 aa14.8□□□□□ -0.04
CSMD1-210ENST00000521646 NPR1P16066 1061 aa14.79□□□□□ -0.04
CSMD1-210ENST00000521646 FKBP4Q02790 459 aaKnown RBP eCLIP14.79□□□□□ -0.04
CSMD1-210ENST00000521646 FMR1Q06787 632 aaKnown RBP eCLIP14.79□□□□□ -0.04
CSMD1-210ENST00000521646 CNTNAP1P78357 1384 aa14.78□□□□□ -0.04
CSMD1-210ENST00000521646 CRY2Q49AN0 593 aa14.78□□□□□ -0.04
CSMD1-210ENST00000521646 CCDC93Q567U6 631 aa14.78□□□□□ -0.04
CSMD1-210ENST00000521646 LRP10Q7Z4F1 713 aa14.78□□□□□ -0.04
CSMD1-210ENST00000521646 NGEFQ8N5V2 710 aa14.78□□□□□ -0.04
CSMD1-210ENST00000521646 RNF123Q5XPI4 1314 aa14.77□□□□□ -0.04
CSMD1-210ENST00000521646 FZD9O00144 591 aa14.77□□□□□ -0.05
CSMD1-210ENST00000521646 FOXN1O15353 648 aa14.77□□□□□ -0.05
CSMD1-210ENST00000521646 EIF4A1P60842 406 aaKnown RBP14.77□□□□□ -0.05
CSMD1-210ENST00000521646 ZNF454Q8N9F8 522 aa14.77□□□□□ -0.05
CSMD1-210ENST00000521646 CFAP53Q96M91 514 aa14.77□□□□□ -0.05
CSMD1-210ENST00000521646 ARHGAP33O14559 1287 aa14.76□□□□□ -0.05
CSMD1-210ENST00000521646 NPHP1O15259 732 aa14.76□□□□□ -0.05
CSMD1-210ENST00000521646 LSM11P83369 360 aaKnown RBP eCLIP14.76□□□□□ -0.05
CSMD1-210ENST00000521646 TAF7Q15545 349 aaPredicted RBP14.76□□□□□ -0.05
CSMD1-210ENST00000521646 POTEEQ6S8J3 1075 aa14.76□□□□□ -0.05
CSMD1-210ENST00000521646 SYNE4Q8N205 404 aa14.76□□□□□ -0.05
CSMD1-210ENST00000521646 COL4A1P02462 1669 aa14.75□□□□□ -0.05
CSMD1-210ENST00000521646 VEGFBP49765 207 aa14.75□□□□□ -0.05
CSMD1-210ENST00000521646 PROSER3Q2NL68 480 aa14.75□□□□□ -0.05
CSMD1-210ENST00000521646 SUSD4Q5VX71 490 aa14.75□□□□□ -0.05
CSMD1-210ENST00000521646 TPTE2Q6XPS3 522 aa14.75□□□□□ -0.05
CSMD1-210ENST00000521646 LDHDQ86WU2 507 aa14.75□□□□□ -0.05
CSMD1-210ENST00000521646 RTF1Q92541 710 aaKnown RBP14.75□□□□□ -0.05
CSMD1-210ENST00000521646 MAP3K15Q6ZN16 1313 aa14.74□□□□□ -0.05
CSMD1-210ENST00000521646 HTATSF1O43719 755 aaKnown RBP14.74□□□□□ -0.05
CSMD1-210ENST00000521646 GPTP24298 496 aa14.74□□□□□ -0.05
CSMD1-210ENST00000521646 IARSP41252 1262 aaKnown RBP14.74□□□□□ -0.05
CSMD1-210ENST00000521646 CAMK2BQ13554 666 aa14.74□□□□□ -0.05
CSMD1-210ENST00000521646 PDIA6Q15084 440 aa14.74□□□□□ -0.05
CSMD1-210ENST00000521646 MAP1SQ66K74 1059 aaPredicted RBP14.74□□□□□ -0.05
CSMD1-210ENST00000521646 ZBTB3Q9H5J0 574 aa14.74□□□□□ -0.05
CSMD1-210ENST00000521646 NUDCQ9Y266 331 aa14.74□□□□□ -0.05
CSMD1-210ENST00000521646 RIC1Q4ADV7 1423 aa14.74□□□□□ -0.05
CSMD1-210ENST00000521646 NTSR2O95665 410 aa14.73□□□□□ -0.05
CSMD1-210ENST00000521646 ANXA1P04083 346 aa14.73□□□□□ -0.05
CSMD1-210ENST00000521646 MYL6BP14649 208 aa14.73□□□□□ -0.05
CSMD1-210ENST00000521646 EAPPQ56P03 285 aaPredicted RBP14.73□□□□□ -0.05
CSMD1-210ENST00000521646 SOGA3Q5TF21 947 aa14.73□□□□□ -0.05
CSMD1-210ENST00000521646 ZNF652Q9Y2D9 606 aa14.73□□□□□ -0.05
CSMD1-210ENST00000521646 RRP7AQ9Y3A4 280 aaKnown RBP14.73□□□□□ -0.05
CSMD1-210ENST00000521646 LAMB2P55268 1798 aa14.73□□□□□ -0.05
CSMD1-210ENST00000521646 TAF1P21675 1872 aa14.72□□□□□ -0.05
CSMD1-210ENST00000521646 EPHX2P34913 555 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms