RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 SHTN1A0MZ66 631 aa17.51■□□□□ 0.39
SRGAP3-212ENST00000520860 NTSR2O95665 410 aa17.51■□□□□ 0.39
SRGAP3-212ENST00000520860 TTLL7Q6ZT98 887 aa17.51■□□□□ 0.39
SRGAP3-212ENST00000520860 MPNDQ8N594 471 aa17.51■□□□□ 0.39
SRGAP3-212ENST00000520860 RRP7AQ9Y3A4 280 aaKnown RBP17.51■□□□□ 0.39
SRGAP3-212ENST00000520860 ABCC4O15439 1325 aa17.5■□□□□ 0.39
SRGAP3-212ENST00000520860 TAF7Q15545 349 aaPredicted RBP17.5■□□□□ 0.39
SRGAP3-212ENST00000520860 DLK2Q6UY11 383 aa17.5■□□□□ 0.39
SRGAP3-212ENST00000520860 HPS5Q9UPZ3 1129 aa17.5■□□□□ 0.39
SRGAP3-212ENST00000520860 LAMB4A4D0S4 1761 aa17.5■□□□□ 0.39
SRGAP3-212ENST00000520860 PER1O15534 1290 aaPredicted RBP17.49■□□□□ 0.39
SRGAP3-212ENST00000520860 BBOX1O75936 387 aa17.49■□□□□ 0.39
SRGAP3-212ENST00000520860 CNGB1Q14028 1251 aaPredicted RBP17.49■□□□□ 0.39
SRGAP3-212ENST00000520860 DCTN1Q14203 1278 aa17.49■□□□□ 0.39
SRGAP3-212ENST00000520860 PARP10Q53GL7 1025 aa17.49■□□□□ 0.39
SRGAP3-212ENST00000520860 SP8Q8IXZ3 490 aa17.49■□□□□ 0.39
SRGAP3-212ENST00000520860 ZNF34Q8IZ26 560 aa17.49■□□□□ 0.39
SRGAP3-212ENST00000520860 DCPSQ96C86 337 aaKnown RBP17.49■□□□□ 0.39
SRGAP3-212ENST00000520860 SLC10A3P09131 477 aa17.48■□□□□ 0.39
SRGAP3-212ENST00000520860 MYL6BP14649 208 aa17.48■□□□□ 0.39
SRGAP3-212ENST00000520860 PKN2Q16513 984 aaKnown RBP17.48■□□□□ 0.39
SRGAP3-212ENST00000520860 TBC1D10BQ4KMP7 808 aaPredicted RBP17.48■□□□□ 0.39
SRGAP3-212ENST00000520860 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
SRGAP3-212ENST00000520860 SAMD7Q7Z3H4 446 aa17.48■□□□□ 0.39
SRGAP3-212ENST00000520860 DPF2Q92785 391 aa17.48■□□□□ 0.39
SRGAP3-212ENST00000520860 CFAP53Q96M91 514 aa17.48■□□□□ 0.39
SRGAP3-212ENST00000520860 CSRNP1Q96S65 589 aa17.48■□□□□ 0.39
SRGAP3-212ENST00000520860 YDJCA8MPS7 323 aa17.47■□□□□ 0.39
SRGAP3-212ENST00000520860 HTATSF1O43719 755 aaKnown RBP17.47■□□□□ 0.39
SRGAP3-212ENST00000520860 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
SRGAP3-212ENST00000520860 UTP14AQ9BVJ6 771 aaKnown RBP17.47■□□□□ 0.39
SRGAP3-212ENST00000520860 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
SRGAP3-212ENST00000520860 HDAC9Q9UKV0 1011 aa17.47■□□□□ 0.39
SRGAP3-212ENST00000520860 NUDCQ9Y266 331 aa17.47■□□□□ 0.39
SRGAP3-212ENST00000520860 ZBTB12Q9Y330 459 aaPredicted RBP17.47■□□□□ 0.39
SRGAP3-212ENST00000520860 ADM5C9JUS6 153 aa17.46■□□□□ 0.39
SRGAP3-212ENST00000520860 CLSPNQ9HAW4 1339 aa17.46■□□□□ 0.38
SRGAP3-212ENST00000520860 U2AF1L5P0DN76 240 aaPredicted RBP17.45■□□□□ 0.38
SRGAP3-212ENST00000520860 U2AF1Q01081 240 aaKnown RBP eCLIP17.45■□□□□ 0.38
SRGAP3-212ENST00000520860 SLC10A5Q5PT55 438 aa17.45■□□□□ 0.38
SRGAP3-212ENST00000520860 POLR2AP24928 1970 aaKnown RBP17.44■□□□□ 0.38
SRGAP3-212ENST00000520860 PSMD14O00487 310 aa17.44■□□□□ 0.38
SRGAP3-212ENST00000520860 RBM26Q5T8P6 1007 aaKnown RBP17.44■□□□□ 0.38
SRGAP3-212ENST00000520860 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
SRGAP3-212ENST00000520860 SULF1Q8IWU6 871 aa17.44■□□□□ 0.38
SRGAP3-212ENST00000520860 PNISRQ8TF01 805 aaKnown RBP17.44■□□□□ 0.38
SRGAP3-212ENST00000520860 EGFRP00533 1210 aa17.43■□□□□ 0.38
SRGAP3-212ENST00000520860 RPS12P25398 132 aaKnown RBP17.43■□□□□ 0.38
SRGAP3-212ENST00000520860 GRAPQ13588 217 aa17.42■□□□□ 0.38
SRGAP3-212ENST00000520860 TMC4Q7Z404 712 aa17.42■□□□□ 0.38
SRGAP3-212ENST00000520860 RASAL3Q86YV0 1011 aa17.42■□□□□ 0.38
SRGAP3-212ENST00000520860 GRAPLQ8TC17 118 aaPredicted RBP17.42■□□□□ 0.38
SRGAP3-212ENST00000520860 WASHC4Q2M389 1173 aa17.41■□□□□ 0.38
SRGAP3-212ENST00000520860 KIF4BQ2VIQ3 1234 aa17.41■□□□□ 0.38
SRGAP3-212ENST00000520860 HABP4Q5JVS0 413 aaKnown RBP17.41■□□□□ 0.38
SRGAP3-212ENST00000520860 DBNDD1Q9H9R9 158 aa17.41■□□□□ 0.38
SRGAP3-212ENST00000520860 GGA3Q9NZ52 723 aa17.41■□□□□ 0.38
SRGAP3-212ENST00000520860 ERBB4Q15303 1308 aa17.41■□□□□ 0.38
SRGAP3-212ENST00000520860 HCLS1P14317 486 aaPredicted RBP17.4■□□□□ 0.38
SRGAP3-212ENST00000520860 EIF4A1P60842 406 aaKnown RBP17.4■□□□□ 0.38
SRGAP3-212ENST00000520860 ZNF296Q8WUU4 475 aaPredicted RBP17.4■□□□□ 0.38
SRGAP3-212ENST00000520860 CDCA5Q96FF9 252 aa17.4■□□□□ 0.38
SRGAP3-212ENST00000520860 FBXO46Q6PJ61 603 aaPredicted RBP17.39■□□□□ 0.37
SRGAP3-212ENST00000520860 DUOX1Q9NRD9 1551 aa17.39■□□□□ 0.37
SRGAP3-212ENST00000520860 TBC1D8O95759 1140 aa17.38■□□□□ 0.37
SRGAP3-212ENST00000520860 FKBP1BP68106 108 aa17.38■□□□□ 0.37
SRGAP3-212ENST00000520860 ANKRD36CQ5JPF3 1778 aa17.38■□□□□ 0.37
SRGAP3-212ENST00000520860 C6orf229H3BNL8 230 aa17.37■□□□□ 0.37
SRGAP3-212ENST00000520860 RIMBP2O15034 1052 aa17.37■□□□□ 0.37
SRGAP3-212ENST00000520860 NEFMP07197 916 aa17.37■□□□□ 0.37
SRGAP3-212ENST00000520860 HSP90AB3PQ58FF7 597 aa17.37■□□□□ 0.37
SRGAP3-212ENST00000520860 NSFL1CQ9UNZ2 370 aaKnown RBP17.37■□□□□ 0.37
SRGAP3-212ENST00000520860 LAMB2P55268 1798 aa17.37■□□□□ 0.37
SRGAP3-212ENST00000520860 KDM3BQ7LBC6 1761 aa17.37■□□□□ 0.37
SRGAP3-212ENST00000520860 ECE2O60344 883 aa17.36■□□□□ 0.37
SRGAP3-212ENST00000520860 EYA3Q99504 573 aa17.36■□□□□ 0.37
SRGAP3-212ENST00000520860 THUMPD2Q9BTF0 503 aaKnown RBP17.36■□□□□ 0.37
SRGAP3-212ENST00000520860 TRMT112Q9UI30 125 aaKnown RBP17.36■□□□□ 0.37
SRGAP3-212ENST00000520860 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
SRGAP3-212ENST00000520860 TRIM26Q12899 539 aaPredicted RBP17.35■□□□□ 0.37
SRGAP3-212ENST00000520860 NLRP10Q86W26 655 aa17.35■□□□□ 0.37
SRGAP3-212ENST00000520860 RTL9Q8NET4 1388 aa17.35■□□□□ 0.37
SRGAP3-212ENST00000520860 LRRC37AA6NMS7 1700 aa17.34■□□□□ 0.37
SRGAP3-212ENST00000520860 GPR25O00155 361 aa17.34■□□□□ 0.37
SRGAP3-212ENST00000520860 ASTN2O75129 1339 aaPredicted RBP17.34■□□□□ 0.37
SRGAP3-212ENST00000520860 DOK7Q18PE1 504 aa17.34■□□□□ 0.37
SRGAP3-212ENST00000520860 NOM1Q5C9Z4 860 aaKnown RBP17.34■□□□□ 0.37
SRGAP3-212ENST00000520860 PAPPA2Q9BXP8 1791 aa17.34■□□□□ 0.37
SRGAP3-212ENST00000520860 PCGF6Q9BYE7 350 aa17.34■□□□□ 0.37
SRGAP3-212ENST00000520860 KCNQ5Q9NR82 932 aa17.34■□□□□ 0.37
SRGAP3-212ENST00000520860 ANGEL2Q5VTE6 544 aaKnown RBP17.33■□□□□ 0.36
SRGAP3-212ENST00000520860 TAF1P21675 1872 aa17.33■□□□□ 0.36
SRGAP3-212ENST00000520860 G3V3G9 751 aa17.32■□□□□ 0.36
SRGAP3-212ENST00000520860 FKTNO75072 461 aa17.32■□□□□ 0.36
SRGAP3-212ENST00000520860 VIL1P09327 827 aaKnown RBP17.32■□□□□ 0.36
SRGAP3-212ENST00000520860 EIF2S2P20042 333 aaKnown RBP17.32■□□□□ 0.36
SRGAP3-212ENST00000520860 SCARF1Q14162 830 aa17.32■□□□□ 0.36
SRGAP3-212ENST00000520860 DCAF8Q5TAQ9 597 aa17.32■□□□□ 0.36
SRGAP3-212ENST00000520860 POLLQ9UGP5 575 aa17.32■□□□□ 0.36
SRGAP3-212ENST00000520860 DDX60Q8IY21 1712 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms