RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 HMG20BQ9P0W2 317 aa13.87□□□□□ -0.19
ERGIC1-208ENST00000520399 WDR7Q9Y4E6 1490 aa13.87□□□□□ -0.19
ERGIC1-208ENST00000520399 ADAMTS2O95450 1211 aa13.87□□□□□ -0.19
ERGIC1-208ENST00000520399 ARHGAP29Q52LW3 1261 aa13.87□□□□□ -0.19
ERGIC1-208ENST00000520399 VPS36Q86VN1 386 aa13.87□□□□□ -0.19
ERGIC1-208ENST00000520399 FERMT1Q9BQL6 677 aa13.87□□□□□ -0.19
ERGIC1-208ENST00000520399 GPTP24298 496 aa13.87□□□□□ -0.19
ERGIC1-208ENST00000520399 SREK1Q8WXA9 508 aaKnown RBP13.87□□□□□ -0.19
ERGIC1-208ENST00000520399 CTNNBL1Q8WYA6 563 aaPredicted RBP13.87□□□□□ -0.19
ERGIC1-208ENST00000520399 TAOK3Q9H2K8 898 aa13.87□□□□□ -0.19
ERGIC1-208ENST00000520399 WDR62O43379 1518 aa13.87□□□□□ -0.19
ERGIC1-208ENST00000520399 PI4KAP2A4QPH2 592 aa13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 FKBP15Q5T1M5 1219 aa13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 PI4KAP1Q8N8J0 262 aa13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 UHRF1BP1LA0JNW5 1464 aa13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 ZSCAN12O43309 604 aa13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 RNF187Q5TA31 235 aaPredicted RBP13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 CCT2P78371 535 aaKnown RBP13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 LRRC45Q96CN5 670 aa13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 CTNNA2P26232 953 aa13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 TMEM266Q2M3C6 531 aa13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 SMARCC1Q92922 1105 aaPredicted RBP13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 DDX19AQ9NUU7 478 aaKnown RBP13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 PARD3Q8TEW0 1356 aa13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 NLRP5P59047 1200 aa13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 MRPL50Q8N5N7 158 aaKnown RBP13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 CDC5LQ99459 802 aaKnown RBP13.86□□□□□ -0.19
ERGIC1-208ENST00000520399 NEMFO60524 1076 aa13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 IGSF3O75054 1194 aa13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 SFPQP23246 707 aaKnown RBP eCLIP13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 TBC1D32Q96NH3 1257 aa13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 ATP5J2-PTCD1G3V325 749 aa13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 STX6O43752 255 aa13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 CCDC96Q2M329 555 aa13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 ABCC1P33527 1531 aa13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 RBBP5Q15291 538 aaKnown RBP13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 CUL5Q93034 780 aa13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 NEK1Q96PY6 1258 aa13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 SPECC1LQ69YQ0 1117 aa13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 RAB34Q9BZG1 259 aa13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 CLIP2Q9UDT6 1046 aa13.85□□□□□ -0.19
ERGIC1-208ENST00000520399 SHANK2Q9UPX8 1470 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 SLU7O95391 586 aaKnown RBP13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 CASQ1P31415 396 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 CNNM3Q8NE01 707 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 SEPT14Q6ZU15 432 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 FSIP1Q8NA03 581 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 CHPF2Q9P2E5 772 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 POLR3AO14802 1390 aaPredicted RBP13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 FGFR1OPO95684 399 aaKnown RBP13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 TOP1P11387 765 aaKnown RBP13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 TMEM67Q5HYA8 995 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 UBE3BQ7Z3V4 1068 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 LARP6Q9BRS8 491 aaKnown RBP13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 ZNF853P0CG23 659 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 SEPT6Q14141 434 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 NOLC1Q14978 699 aaKnown RBP eCLIP13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 LDHAL6AQ6ZMR3 332 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 NCOA7Q8NI08 942 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 EHMT1Q9H9B1 1298 aa13.84□□□□□ -0.19
ERGIC1-208ENST00000520399 CCDC194A0A1B0GVG4 234 aa13.83□□□□□ -0.2
ERGIC1-208ENST00000520399 NAA25Q14CX7 972 aa13.83□□□□□ -0.2
ERGIC1-208ENST00000520399 TSHZ3Q63HK5 1081 aa13.83□□□□□ -0.2
ERGIC1-208ENST00000520399 CERS3Q8IU89 383 aa13.83□□□□□ -0.2
ERGIC1-208ENST00000520399 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
ERGIC1-208ENST00000520399 TCHPQ9BT92 498 aa13.83□□□□□ -0.2
ERGIC1-208ENST00000520399 UQCRFS1P1P0C7P4 283 aa13.83□□□□□ -0.2
ERGIC1-208ENST00000520399 STX1AQ16623 288 aa13.83□□□□□ -0.2
ERGIC1-208ENST00000520399 KLHL10Q6JEL2 608 aa13.83□□□□□ -0.2
ERGIC1-208ENST00000520399 NAP1L3Q99457 506 aaPredicted RBP13.83□□□□□ -0.2
ERGIC1-208ENST00000520399 FSD2A1L4K1 749 aa13.83□□□□□ -0.2
ERGIC1-208ENST00000520399 UVSSAQ2YD98 709 aa13.83□□□□□ -0.2
ERGIC1-208ENST00000520399 ZFYVE9O95405 1425 aa13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 NOL3O60936 208 aaKnown RBP13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 USP16Q9Y5T5 823 aa13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 HSPA4P34932 840 aa13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 ANKRD13DQ6ZTN6 518 aa13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 CCDC82Q8N4S0 544 aa13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 AKAP4Q5JQC9 854 aa13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 SPTY2D1Q68D10 685 aaPredicted RBP13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 MFSD6Q6ZSS7 791 aa13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 CCDC12Q8WUD4 166 aaPredicted RBP13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 KIF5BP33176 963 aa13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 METAP2P50579 478 aaKnown RBP eCLIP13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 DDX12PQ92771 950 aa13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 KIF21AQ7Z4S6 1674 aa13.82□□□□□ -0.2
ERGIC1-208ENST00000520399 KIF5CO60282 957 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 FBLN1P23142 703 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 IARSP41252 1262 aaKnown RBP13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 KRBA2Q6ZNG9 492 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 CKAP2LQ8IYA6 745 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 MSH6P52701 1360 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 PDE4BQ07343 736 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 FAM114A1Q8IWE2 563 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 PPP1R14CQ8TAE6 165 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 WDR70Q9NW82 654 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 CADPS2Q86UW7 1296 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 PANK2Q9BZ23 570 aa13.81□□□□□ -0.2
ERGIC1-208ENST00000520399 SPATS2LQ9NUQ6 558 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms