RNA–Protein interactions for RNA: ENST00000519686.6

VNN3-212, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-212ENST00000519686 XAGE3Q8WTP9 111 aa11.79□□□□□ -0.52
VNN3-212ENST00000519686 CRAMP1Q96RY5 1269 aa11.79□□□□□ -0.52
VNN3-212ENST00000519686 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
VNN3-212ENST00000519686 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
VNN3-212ENST00000519686 SCN4AP35499 1836 aa11.78□□□□□ -0.52
VNN3-212ENST00000519686 ANKRD36CQ5JPF3 1778 aa11.78□□□□□ -0.52
VNN3-212ENST00000519686 RNF123Q5XPI4 1314 aa11.78□□□□□ -0.52
VNN3-212ENST00000519686 ZNF541Q9H0D2 1346 aa11.78□□□□□ -0.52
VNN3-212ENST00000519686 EAPPQ56P03 285 aaPredicted RBP11.78□□□□□ -0.52
VNN3-212ENST00000519686 HDGFL1Q5TGJ6 251 aa11.78□□□□□ -0.52
VNN3-212ENST00000519686 LRP10Q7Z4F1 713 aa11.78□□□□□ -0.52
VNN3-212ENST00000519686 L3MBTL3Q96JM7 780 aaPredicted RBP11.78□□□□□ -0.52
VNN3-212ENST00000519686 DDX21Q9NR30 783 aaKnown RBP eCLIP11.78□□□□□ -0.52
VNN3-212ENST00000519686 EIF6P56537 245 aaKnown RBP11.77□□□□□ -0.53
VNN3-212ENST00000519686 KRT24Q2M2I5 525 aa11.77□□□□□ -0.53
VNN3-212ENST00000519686 LDHDQ86WU2 507 aa11.77□□□□□ -0.53
VNN3-212ENST00000519686 TAF1DQ9H5J8 278 aaPredicted RBP11.77□□□□□ -0.53
VNN3-212ENST00000519686 CHPF2Q9P2E5 772 aa11.77□□□□□ -0.53
VNN3-212ENST00000519686 TRMT112Q9UI30 125 aaKnown RBP11.77□□□□□ -0.53
VNN3-212ENST00000519686 HACL1Q9UJ83 578 aa11.77□□□□□ -0.53
VNN3-212ENST00000519686 FZD9O00144 591 aa11.76□□□□□ -0.53
VNN3-212ENST00000519686 HOXB7P09629 217 aa11.76□□□□□ -0.53
VNN3-212ENST00000519686 POTEIP0CG38 1075 aa11.76□□□□□ -0.53
VNN3-212ENST00000519686 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
VNN3-212ENST00000519686 TIE1P35590 1138 aa11.76□□□□□ -0.53
VNN3-212ENST00000519686 CALD1Q05682 793 aaKnown RBP11.76□□□□□ -0.53
VNN3-212ENST00000519686 PDAP1Q13442 181 aaKnown RBP11.76□□□□□ -0.53
VNN3-212ENST00000519686 NLRP10Q86W26 655 aa11.76□□□□□ -0.53
VNN3-212ENST00000519686 GPC2Q8N158 579 aa11.76□□□□□ -0.53
VNN3-212ENST00000519686 LARGE2Q8N3Y3 721 aa11.76□□□□□ -0.53
VNN3-212ENST00000519686 JMYQ8N9B5 988 aa11.76□□□□□ -0.53
VNN3-212ENST00000519686 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
VNN3-212ENST00000519686 DBF4Q9UBU7 674 aaPredicted RBP11.76□□□□□ -0.53
VNN3-212ENST00000519686 LMOD1P29536 600 aaPredicted RBP11.75□□□□□ -0.53
VNN3-212ENST00000519686 EPHX2P34913 555 aa11.75□□□□□ -0.53
VNN3-212ENST00000519686 PSEN1P49768 467 aa11.75□□□□□ -0.53
VNN3-212ENST00000519686 TCIRG1Q13488 830 aa11.75□□□□□ -0.53
VNN3-212ENST00000519686 SLC10A5Q5PT55 438 aa11.75□□□□□ -0.53
VNN3-212ENST00000519686 C3orf67Q6ZVT6 689 aa11.75□□□□□ -0.53
VNN3-212ENST00000519686 DDX46Q7L014 1031 aaKnown RBP11.75□□□□□ -0.53
VNN3-212ENST00000519686 PNMA8AQ86V59 439 aaPredicted RBP11.75□□□□□ -0.53
VNN3-212ENST00000519686 NIM1KQ8IY84 436 aa11.75□□□□□ -0.53
VNN3-212ENST00000519686 DCBLD2Q96PD2 775 aa11.75□□□□□ -0.53
VNN3-212ENST00000519686 BMP2KQ9NSY1 1161 aaPredicted RBP11.75□□□□□ -0.53
VNN3-212ENST00000519686 GJA3Q9Y6H8 435 aa11.75□□□□□ -0.53
VNN3-212ENST00000519686 ABCC4O15439 1325 aa11.74□□□□□ -0.53
VNN3-212ENST00000519686 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
VNN3-212ENST00000519686 SNED1Q8TER0 1413 aa11.74□□□□□ -0.53
VNN3-212ENST00000519686 HCLS1P14317 486 aaPredicted RBP11.74□□□□□ -0.53
VNN3-212ENST00000519686 DUSP27Q5VZP5 1158 aa11.74□□□□□ -0.53
VNN3-212ENST00000519686 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
VNN3-212ENST00000519686 SUPT20HQ8NEM7 779 aa11.74□□□□□ -0.53
VNN3-212ENST00000519686 PLBD2Q8NHP8 589 aa11.74□□□□□ -0.53
VNN3-212ENST00000519686 MBIPQ9NS73 344 aa11.74□□□□□ -0.53
VNN3-212ENST00000519686 HYPKQ9NX55 129 aa11.74□□□□□ -0.53
VNN3-212ENST00000519686 ATP6V0A2Q9Y487 856 aa11.74□□□□□ -0.53
VNN3-212ENST00000519686 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.73□□□□□ -0.53
VNN3-212ENST00000519686 APAF1O14727 1248 aa11.73□□□□□ -0.53
VNN3-212ENST00000519686 PPIP5K2O43314 1243 aa11.73□□□□□ -0.53
VNN3-212ENST00000519686 BBOX1O75936 387 aa11.73□□□□□ -0.53
VNN3-212ENST00000519686 GNAI1P63096 354 aa11.73□□□□□ -0.53
VNN3-212ENST00000519686 ZNF428Q96B54 188 aa11.73□□□□□ -0.53
VNN3-212ENST00000519686 ZFP91Q96JP5 570 aaPredicted RBP11.73□□□□□ -0.53
VNN3-212ENST00000519686 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
VNN3-212ENST00000519686 LAMB2P55268 1798 aa11.73□□□□□ -0.53
VNN3-212ENST00000519686 TTLL13PA6NNM8 815 aa11.72□□□□□ -0.53
VNN3-212ENST00000519686 AOC3Q16853 763 aa11.72□□□□□ -0.53
VNN3-212ENST00000519686 DPP8Q6V1X1 898 aaPredicted RBP11.72□□□□□ -0.53
VNN3-212ENST00000519686 VPS33BQ9H267 617 aa11.72□□□□□ -0.53
VNN3-212ENST00000519686 IFT57Q9NWB7 429 aa11.72□□□□□ -0.53
VNN3-212ENST00000519686 ATP5J2-PTCD1G3V325 749 aa11.71□□□□□ -0.53
VNN3-212ENST00000519686 GOLGA2Q08379 1002 aa11.71□□□□□ -0.53
VNN3-212ENST00000519686 GRAPQ13588 217 aa11.71□□□□□ -0.53
VNN3-212ENST00000519686 ASTLQ6HA08 431 aaPredicted RBP11.71□□□□□ -0.53
VNN3-212ENST00000519686 RIC3Q7Z5B4 369 aa11.71□□□□□ -0.53
VNN3-212ENST00000519686 SP8Q8IXZ3 490 aa11.71□□□□□ -0.53
VNN3-212ENST00000519686 MPNDQ8N594 471 aa11.71□□□□□ -0.53
VNN3-212ENST00000519686 GRAPLQ8TC17 118 aaPredicted RBP11.71□□□□□ -0.53
VNN3-212ENST00000519686 CHMP4AQ9BY43 222 aa11.71□□□□□ -0.53
VNN3-212ENST00000519686 MKRN1Q9UHC7 482 aaKnown RBP11.71□□□□□ -0.53
VNN3-212ENST00000519686 COL4A5P29400 1685 aa11.71□□□□□ -0.53
VNN3-212ENST00000519686 TMEM88BA6NKF7 163 aa11.7□□□□□ -0.54
VNN3-212ENST00000519686 ELL2O00472 640 aaPredicted RBP11.7□□□□□ -0.54
VNN3-212ENST00000519686 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
VNN3-212ENST00000519686 TMC4Q7Z404 712 aa11.7□□□□□ -0.54
VNN3-212ENST00000519686 SLC51AQ86UW1 340 aa11.7□□□□□ -0.54
VNN3-212ENST00000519686 FAM89AQ96GI7 184 aa11.7□□□□□ -0.54
VNN3-212ENST00000519686 TAOK2Q9UL54 1235 aa11.7□□□□□ -0.54
VNN3-212ENST00000519686 PASKQ96RG2 1323 aa11.7□□□□□ -0.54
VNN3-212ENST00000519686 ZNF853P0CG23 659 aa11.69□□□□□ -0.54
VNN3-212ENST00000519686 RTL5Q5HYW3 569 aaPredicted RBP11.69□□□□□ -0.54
VNN3-212ENST00000519686 MAP1SQ66K74 1059 aaPredicted RBP11.69□□□□□ -0.54
VNN3-212ENST00000519686 CNTROBQ8N137 903 aa11.69□□□□□ -0.54
VNN3-212ENST00000519686 RTFDC1Q9BY42 306 aaPredicted RBP11.69□□□□□ -0.54
VNN3-212ENST00000519686 ZNRF3Q9ULT6 936 aa11.69□□□□□ -0.54
VNN3-212ENST00000519686 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
VNN3-212ENST00000519686 ADAMTSL1Q8N6G6 1762 aa11.69□□□□□ -0.54
VNN3-212ENST00000519686 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
VNN3-212ENST00000519686 HSPA1AP0DMV8 641 aaKnown RBP11.68□□□□□ -0.54
VNN3-212ENST00000519686 HSPA1BP0DMV9 641 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms