RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 CCDC152Q4G0S7 254 aa17.66■□□□□ 0.42
SDC2-203ENST00000519587 SYNE4Q8N205 404 aa17.66■□□□□ 0.42
SDC2-203ENST00000519587 C1orf115Q9H7X2 142 aa17.66■□□□□ 0.42
SDC2-203ENST00000519587 COL11A2P13942 1736 aaPredicted RBP17.65■□□□□ 0.42
SDC2-203ENST00000519587 RABL6Q3YEC7 729 aaPredicted RBP17.65■□□□□ 0.42
SDC2-203ENST00000519587 PELP1Q8IZL8 1130 aaKnown RBP17.65■□□□□ 0.42
SDC2-203ENST00000519587 DLEC1Q9Y238 1755 aa17.65■□□□□ 0.42
SDC2-203ENST00000519587 RTL9Q8NET4 1388 aa17.65■□□□□ 0.42
SDC2-203ENST00000519587 HMMRO75330 724 aa17.64■□□□□ 0.41
SDC2-203ENST00000519587 FOXO4P98177 505 aa17.64■□□□□ 0.41
SDC2-203ENST00000519587 RPAP2Q8IXW5 612 aaPredicted RBP17.64■□□□□ 0.41
SDC2-203ENST00000519587 KLHL34Q8N239 644 aa17.64■□□□□ 0.41
SDC2-203ENST00000519587 RPGRQ92834 1020 aaKnown RBP17.64■□□□□ 0.41
SDC2-203ENST00000519587 CHMP3Q9Y3E7 222 aa17.64■□□□□ 0.41
SDC2-203ENST00000519587 MTX1Q13505 466 aa17.63■□□□□ 0.41
SDC2-203ENST00000519587 SF3B3Q15393 1217 aaKnown RBP17.63■□□□□ 0.41
SDC2-203ENST00000519587 LMBR1LQ6UX01 489 aa17.63■□□□□ 0.41
SDC2-203ENST00000519587 CCDC24Q8N4L8 307 aa17.63■□□□□ 0.41
SDC2-203ENST00000519587 ANKRD44Q8N8A2 993 aa17.63■□□□□ 0.41
SDC2-203ENST00000519587 KAZALD1Q96I82 304 aa17.63■□□□□ 0.41
SDC2-203ENST00000519587 CCDC57Q2TAC2 916 aa17.62■□□□□ 0.41
SDC2-203ENST00000519587 CEP85Q6P2H3 762 aa17.62■□□□□ 0.41
SDC2-203ENST00000519587 TTLL11Q8NHH1 800 aa17.62■□□□□ 0.41
SDC2-203ENST00000519587 SPEF2Q9C093 1822 aa17.61■□□□□ 0.41
SDC2-203ENST00000519587 SRGAP3O43295 1099 aa17.61■□□□□ 0.41
SDC2-203ENST00000519587 CSF1RP07333 972 aa17.61■□□□□ 0.41
SDC2-203ENST00000519587 IFIT5Q13325 482 aaKnown RBP17.61■□□□□ 0.41
SDC2-203ENST00000519587 FAM161AQ3B820 660 aa17.61■□□□□ 0.41
SDC2-203ENST00000519587 CRY2Q49AN0 593 aa17.61■□□□□ 0.41
SDC2-203ENST00000519587 TAF7LQ5H9L4 462 aa17.61■□□□□ 0.41
SDC2-203ENST00000519587 EPHA10Q5JZY3 1008 aa17.61■□□□□ 0.41
SDC2-203ENST00000519587 CDC5LQ99459 802 aaKnown RBP17.61■□□□□ 0.41
SDC2-203ENST00000519587 CD2APQ9Y5K6 639 aa17.61■□□□□ 0.41
SDC2-203ENST00000519587 ANKRD18BA2A2Z9 1011 aa17.6■□□□□ 0.41
SDC2-203ENST00000519587 KLRG2A4D1S0 409 aaPredicted RBP17.6■□□□□ 0.41
SDC2-203ENST00000519587 H0YIN7 160 aa17.6■□□□□ 0.41
SDC2-203ENST00000519587 NPR1P16066 1061 aa17.6■□□□□ 0.41
SDC2-203ENST00000519587 ATP8B2P98198 1209 aa17.6■□□□□ 0.41
SDC2-203ENST00000519587 DDX46Q7L014 1031 aaKnown RBP17.6■□□□□ 0.41
SDC2-203ENST00000519587 RBM17Q96I25 401 aaKnown RBP17.6■□□□□ 0.41
SDC2-203ENST00000519587 KIAA1551Q9HCM1 1747 aa17.59■□□□□ 0.41
SDC2-203ENST00000519587 C2CD5Q86YS7 1000 aa17.59■□□□□ 0.41
SDC2-203ENST00000519587 GREM2Q9H772 168 aa17.59■□□□□ 0.41
SDC2-203ENST00000519587 GOLGB1Q14789 3259 aaKnown RBP17.59■□□□□ 0.41
SDC2-203ENST00000519587 CACNA1SQ13698 1873 aa17.58■□□□□ 0.41
SDC2-203ENST00000519587 ITGA6P23229 1130 aa17.58■□□□□ 0.4
SDC2-203ENST00000519587 C3orf67Q6ZVT6 689 aa17.58■□□□□ 0.4
SDC2-203ENST00000519587 SSH3Q8TE77 659 aa17.58■□□□□ 0.4
SDC2-203ENST00000519587 MASTLQ96GX5 879 aa17.58■□□□□ 0.4
SDC2-203ENST00000519587 CCDC85AQ96PX6 553 aaPredicted RBP17.58■□□□□ 0.4
SDC2-203ENST00000519587 SRGNP10124 158 aa17.57■□□□□ 0.4
SDC2-203ENST00000519587 HOXA10P31260 410 aaPredicted RBP17.57■□□□□ 0.4
SDC2-203ENST00000519587 TGFB2P61812 414 aa17.57■□□□□ 0.4
SDC2-203ENST00000519587 STYK1Q6J9G0 422 aa17.57■□□□□ 0.4
SDC2-203ENST00000519587 RWDD1Q9H446 243 aaPredicted RBP17.57■□□□□ 0.4
SDC2-203ENST00000519587 PCDHB15Q9Y5E8 787 aa17.57■□□□□ 0.4
SDC2-203ENST00000519587 PNMA6EA0A0J9YXQ4 647 aa17.56■□□□□ 0.4
SDC2-203ENST00000519587 HSPA6P17066 643 aa17.56■□□□□ 0.4
SDC2-203ENST00000519587 ALDH1B1P30837 517 aa17.56■□□□□ 0.4
SDC2-203ENST00000519587 IGHMBP2P38935 993 aaKnown RBP17.56■□□□□ 0.4
SDC2-203ENST00000519587 POLA2Q14181 598 aa17.56■□□□□ 0.4
SDC2-203ENST00000519587 NLGN2Q8NFZ4 835 aa17.56■□□□□ 0.4
SDC2-203ENST00000519587 CRAMP1Q96RY5 1269 aa17.56■□□□□ 0.4
SDC2-203ENST00000519587 TAF1P21675 1872 aa17.55■□□□□ 0.4
SDC2-203ENST00000519587 BRCA1P38398 1863 aaKnown RBP17.55■□□□□ 0.4
SDC2-203ENST00000519587 HDAC1Q13547 482 aaPredicted RBP17.55■□□□□ 0.4
SDC2-203ENST00000519587 HSP90AB4PQ58FF6 505 aa17.55■□□□□ 0.4
SDC2-203ENST00000519587 TMC4Q7Z404 712 aa17.55■□□□□ 0.4
SDC2-203ENST00000519587 ANKRD18AQ8IVF6 992 aa17.55■□□□□ 0.4
SDC2-203ENST00000519587 CNKSR1Q969H4 720 aa17.55■□□□□ 0.4
SDC2-203ENST00000519587 FBXO3Q9UK99 471 aa17.55■□□□□ 0.4
SDC2-203ENST00000519587 GRIN3BO60391 1043 aa17.54■□□□□ 0.4
SDC2-203ENST00000519587 GRAPQ13588 217 aa17.54■□□□□ 0.4
SDC2-203ENST00000519587 GRAPLQ8TC17 118 aaPredicted RBP17.54■□□□□ 0.4
SDC2-203ENST00000519587 ZNF622Q969S3 477 aaKnown RBP eCLIP17.54■□□□□ 0.4
SDC2-203ENST00000519587 CCDC136Q96JN2 1154 aa17.54■□□□□ 0.4
SDC2-203ENST00000519587 MPHOSPH8Q99549 860 aa17.54■□□□□ 0.4
SDC2-203ENST00000519587 COPRSQ9NQ92 184 aa17.54■□□□□ 0.4
SDC2-203ENST00000519587 PPP4R2Q9NY27 417 aa17.54■□□□□ 0.4
SDC2-203ENST00000519587 LRRC37AA6NMS7 1700 aa17.53■□□□□ 0.4
SDC2-203ENST00000519587 CHRNA5P30532 468 aa17.53■□□□□ 0.4
SDC2-203ENST00000519587 RPS8P62241 208 aaKnown RBP17.53■□□□□ 0.4
SDC2-203ENST00000519587 OS9Q13438 667 aaPredicted RBP17.53■□□□□ 0.4
SDC2-203ENST00000519587 SIRT2Q8IXJ6 389 aa17.53■□□□□ 0.4
SDC2-203ENST00000519587 TMX4Q9H1E5 349 aaPredicted RBP17.53■□□□□ 0.4
SDC2-203ENST00000519587 SEC31BQ9NQW1 1179 aa17.53■□□□□ 0.4
SDC2-203ENST00000519587 BBOX1O75936 387 aa17.52■□□□□ 0.4
SDC2-203ENST00000519587 CIAO1O76071 339 aa17.52■□□□□ 0.4
SDC2-203ENST00000519587 DPEP1P16444 411 aa17.52■□□□□ 0.4
SDC2-203ENST00000519587 YBX3P16989 372 aaKnown RBP eCLIP17.52■□□□□ 0.4
SDC2-203ENST00000519587 RFX5P48382 616 aaPredicted RBP17.52■□□□□ 0.4
SDC2-203ENST00000519587 LDHAL6AQ6ZMR3 332 aa17.52■□□□□ 0.4
SDC2-203ENST00000519587 ERC1Q8IUD2 1116 aa17.52■□□□□ 0.4
SDC2-203ENST00000519587 CNNM1Q9NRU3 951 aa17.52■□□□□ 0.4
SDC2-203ENST00000519587 A0A1B0GUL6 1792 aa17.52■□□□□ 0.4
SDC2-203ENST00000519587 SURF6O75683 361 aaKnown RBP17.51■□□□□ 0.39
SDC2-203ENST00000519587 PTPN12Q05209 780 aaKnown RBP17.51■□□□□ 0.39
SDC2-203ENST00000519587 G3BP1Q13283 466 aaKnown RBP eCLIP17.51■□□□□ 0.39
SDC2-203ENST00000519587 SIL1Q9H173 461 aa17.51■□□□□ 0.39
SDC2-203ENST00000519587 GPBP1L1Q9HC44 474 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms