RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 TDO2P48775 406 aa15.8■□□□□ 0.12
PABPC1-208ENST00000519004 SH2B1Q9NRF2 756 aaPredicted RBP15.8■□□□□ 0.12
PABPC1-208ENST00000519004 ADCY9O60503 1353 aa15.8■□□□□ 0.12
PABPC1-208ENST00000519004 EVC2Q86UK5 1308 aa15.8■□□□□ 0.12
PABPC1-208ENST00000519004 SGSM2O43147 1006 aa15.79■□□□□ 0.12
PABPC1-208ENST00000519004 APOBRQ0VD83 1088 aa15.79■□□□□ 0.12
PABPC1-208ENST00000519004 ZSCAN31Q96LW9 406 aaPredicted RBP15.79■□□□□ 0.12
PABPC1-208ENST00000519004 LRRCC1Q9C099 1032 aa15.79■□□□□ 0.12
PABPC1-208ENST00000519004 MROH2AA6NES4 1674 aa15.79■□□□□ 0.12
PABPC1-208ENST00000519004 CCDC196A0A1B0GTZ2 297 aa15.79■□□□□ 0.12
PABPC1-208ENST00000519004 ME3Q16798 604 aa15.79■□□□□ 0.12
PABPC1-208ENST00000519004 CCDC30Q5VVM6 783 aa15.79■□□□□ 0.12
PABPC1-208ENST00000519004 PDE11AQ9HCR9 933 aa15.79■□□□□ 0.12
PABPC1-208ENST00000519004 AKAP2Q9Y2D5 859 aa15.79■□□□□ 0.12
PABPC1-208ENST00000519004 PREX1Q8TCU6 1659 aa15.78■□□□□ 0.12
PABPC1-208ENST00000519004 NECAB1Q8N987 351 aa15.78■□□□□ 0.12
PABPC1-208ENST00000519004 FAM212AQ96EL1 285 aa15.78■□□□□ 0.12
PABPC1-208ENST00000519004 A0A087WWV3 80 aa15.78■□□□□ 0.12
PABPC1-208ENST00000519004 SFPQP23246 707 aaKnown RBP eCLIP15.78■□□□□ 0.12
PABPC1-208ENST00000519004 VPS53Q5VIR6 699 aa15.78■□□□□ 0.12
PABPC1-208ENST00000519004 A0A087WUV0 522 aaPredicted RBP15.77■□□□□ 0.12
PABPC1-208ENST00000519004 ZRSR1Q15695 479 aaKnown RBP15.77■□□□□ 0.12
PABPC1-208ENST00000519004 KAT2BQ92831 832 aa15.77■□□□□ 0.12
PABPC1-208ENST00000519004 SRGAP3O43295 1099 aa15.77■□□□□ 0.11
PABPC1-208ENST00000519004 GNL2Q13823 731 aaKnown RBP15.77■□□□□ 0.11
PABPC1-208ENST00000519004 CWC27Q6UX04 472 aaKnown RBP15.77■□□□□ 0.11
PABPC1-208ENST00000519004 TMC6Q7Z403 805 aa15.77■□□□□ 0.11
PABPC1-208ENST00000519004 AOPEPQ8N6M6 819 aa15.77■□□□□ 0.11
PABPC1-208ENST00000519004 RABGGTAQ92696 567 aa15.77■□□□□ 0.11
PABPC1-208ENST00000519004 FAN1Q9Y2M0 1017 aa15.77■□□□□ 0.11
PABPC1-208ENST00000519004 CCDC151A5D8V7 595 aa15.76■□□□□ 0.11
PABPC1-208ENST00000519004 FYB1O15117 783 aa15.76■□□□□ 0.11
PABPC1-208ENST00000519004 CCP110O43303 1012 aa15.76■□□□□ 0.11
PABPC1-208ENST00000519004 N4BP1O75113 896 aaKnown RBP15.76■□□□□ 0.11
PABPC1-208ENST00000519004 CPSF1Q10570 1443 aaKnown RBP15.76■□□□□ 0.11
PABPC1-208ENST00000519004 SETD1AO15047 1707 aaKnown RBP15.76■□□□□ 0.11
PABPC1-208ENST00000519004 KIF1BO60333 1816 aa15.76■□□□□ 0.11
PABPC1-208ENST00000519004 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
PABPC1-208ENST00000519004 PPP2R3AQ06190 1150 aa15.76■□□□□ 0.11
PABPC1-208ENST00000519004 DNAAF4Q8WXU2 420 aa15.76■□□□□ 0.11
PABPC1-208ENST00000519004 CD163L1Q9NR16 1453 aa15.76■□□□□ 0.11
PABPC1-208ENST00000519004 AOX1Q06278 1338 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 DEPDC5O75140 1603 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 MAP3K9P80192 1104 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 PSME1Q06323 249 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 BRD3Q15059 726 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 ADCK5Q3MIX3 580 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 PLEKHO1Q53GL0 409 aaPredicted RBP15.75■□□□□ 0.11
PABPC1-208ENST00000519004 MICALL1Q8N3F8 863 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 CABP2Q9NPB3 220 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 RIMS2Q9UQ26 1411 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 HMOX1P09601 288 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 JAKMIP3Q5VZ66 844 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 MSL3Q8N5Y2 521 aaKnown RBP15.75■□□□□ 0.11
PABPC1-208ENST00000519004 XPO4Q9C0E2 1151 aaKnown RBP15.75■□□□□ 0.11
PABPC1-208ENST00000519004 PLEKHA4Q9H4M7 779 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 PPP6R1Q9UPN7 881 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 MRFAP1Q9Y605 127 aa15.75■□□□□ 0.11
PABPC1-208ENST00000519004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.75■□□□□ 0.117e-8■□□□□ 10.3
PABPC1-208ENST00000519004 CTAGE5O15320 804 aa15.74■□□□□ 0.11
PABPC1-208ENST00000519004 RPAINQ86UA6 219 aa15.74■□□□□ 0.11
PABPC1-208ENST00000519004 ANO10Q9NW15 660 aa15.74■□□□□ 0.11
PABPC1-208ENST00000519004 PPFIA4O75335 1185 aa15.74■□□□□ 0.11
PABPC1-208ENST00000519004 PDCP20941 246 aa15.74■□□□□ 0.11
PABPC1-208ENST00000519004 BEND6Q5SZJ8 279 aaPredicted RBP15.74■□□□□ 0.11
PABPC1-208ENST00000519004 KCNV1Q6PIU1 500 aa15.74■□□□□ 0.11
PABPC1-208ENST00000519004 JAKMIP1Q96N16 626 aaKnown RBP15.74■□□□□ 0.11
PABPC1-208ENST00000519004 ZSWIM6Q9HCJ5 1215 aa15.74■□□□□ 0.11
PABPC1-208ENST00000519004 TPCN1Q9ULQ1 816 aa15.74■□□□□ 0.11
PABPC1-208ENST00000519004 EFCAB6Q5THR3 1501 aa15.73■□□□□ 0.11
PABPC1-208ENST00000519004 NRDCO43847 1150 aa15.73■□□□□ 0.11
PABPC1-208ENST00000519004 TXLNAP40222 546 aa15.73■□□□□ 0.11
PABPC1-208ENST00000519004 MCM6Q14566 821 aa15.73■□□□□ 0.11
PABPC1-208ENST00000519004 GRIPAP1Q4V328 841 aa15.73■□□□□ 0.11
PABPC1-208ENST00000519004 HSP90AB3PQ58FF7 597 aa15.73■□□□□ 0.11
PABPC1-208ENST00000519004 TMEM132EQ6IEE7 984 aa15.73■□□□□ 0.11
PABPC1-208ENST00000519004 CEP57L1Q8IYX8 460 aa15.73■□□□□ 0.11
PABPC1-208ENST00000519004 C14orf93Q9H972 538 aaKnown RBP15.73■□□□□ 0.11
PABPC1-208ENST00000519004 GIGYF1O75420 1035 aaPredicted RBP15.73■□□□□ 0.11
PABPC1-208ENST00000519004 MAP4K4O95819 1239 aaPredicted RBP15.73■□□□□ 0.11
PABPC1-208ENST00000519004 HNRNPH1P31943 449 aaKnown RBP15.73■□□□□ 0.11
PABPC1-208ENST00000519004 EIF5P55010 431 aaKnown RBP15.73■□□□□ 0.11
PABPC1-208ENST00000519004 LARP1Q6PKG0 1096 aaKnown RBP15.73■□□□□ 0.11
PABPC1-208ENST00000519004 HNRNPLLQ8WVV9 542 aaKnown RBP15.73■□□□□ 0.11
PABPC1-208ENST00000519004 GOLGA1Q92805 767 aa15.73■□□□□ 0.11
PABPC1-208ENST00000519004 MPHOSPH8Q99549 860 aa15.73■□□□□ 0.11
PABPC1-208ENST00000519004 IFNKQ9P0W0 207 aa15.73■□□□□ 0.11
PABPC1-208ENST00000519004 ZFYVE9O95405 1425 aa15.72■□□□□ 0.11
PABPC1-208ENST00000519004 VWA3AA6NCI4 1184 aa15.72■□□□□ 0.11
PABPC1-208ENST00000519004 MNAT1P51948 309 aa15.72■□□□□ 0.11
PABPC1-208ENST00000519004 CNNM3Q8NE01 707 aa15.72■□□□□ 0.11
PABPC1-208ENST00000519004 JPH4Q96JJ6 628 aa15.72■□□□□ 0.11
PABPC1-208ENST00000519004 BICC1Q9H694 974 aaKnown RBP15.72■□□□□ 0.11
PABPC1-208ENST00000519004 DLG5Q8TDM6 1919 aa15.72■□□□□ 0.11
PABPC1-208ENST00000519004 FAM83GA6ND36 823 aa15.72■□□□□ 0.11
PABPC1-208ENST00000519004 DHX8Q14562 1220 aaKnown RBP15.72■□□□□ 0.11
PABPC1-208ENST00000519004 TTLL5Q6EMB2 1281 aa15.72■□□□□ 0.11
PABPC1-208ENST00000519004 HDXQ7Z353 690 aa15.72■□□□□ 0.11
PABPC1-208ENST00000519004 TM6SF1Q9BZW5 370 aa15.72■□□□□ 0.11
PABPC1-208ENST00000519004 CYP46A1Q9Y6A2 500 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms