RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 PKD1L2Q7Z442 2459 aa7.6□□□□□ -1.19
SPIDR-208ENST00000518711 KIF7Q2M1P5 1343 aa7.6□□□□□ -1.19
SPIDR-208ENST00000518711 DIAPH1O60610 1272 aaKnown RBP7.6□□□□□ -1.19
SPIDR-208ENST00000518711 EIF6P56537 245 aaKnown RBP7.6□□□□□ -1.19
SPIDR-208ENST00000518711 NOM1Q5C9Z4 860 aaKnown RBP7.6□□□□□ -1.19
SPIDR-208ENST00000518711 DZIP3Q86Y13 1208 aaKnown RBP7.6□□□□□ -1.19
SPIDR-208ENST00000518711 ZNF277Q9NRM2 450 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-208ENST00000518711 HCN4Q9Y3Q4 1203 aa7.6□□□□□ -1.19
SPIDR-208ENST00000518711 CDHR2Q9BYE9 1310 aa7.59□□□□□ -1.19
SPIDR-208ENST00000518711 ERVV-1B6SEH8 477 aa7.59□□□□□ -1.19
SPIDR-208ENST00000518711 FKTNO75072 461 aa7.59□□□□□ -1.19
SPIDR-208ENST00000518711 A1BGP04217 495 aa7.59□□□□□ -1.19
SPIDR-208ENST00000518711 SNRPA1P09661 255 aaKnown RBP7.59□□□□□ -1.19
SPIDR-208ENST00000518711 ARMC5Q96C12 935 aa7.59□□□□□ -1.19
SPIDR-208ENST00000518711 NYXQ9GZU5 481 aa7.59□□□□□ -1.19
SPIDR-208ENST00000518711 SCN7AQ01118 1682 aa7.59□□□□□ -1.19
SPIDR-208ENST00000518711 SNED1Q8TER0 1413 aa7.59□□□□□ -1.19
SPIDR-208ENST00000518711 NPC1L1Q9UHC9 1359 aa7.59□□□□□ -1.2
SPIDR-208ENST00000518711 MUC3AQ02505 3323 aa7.58□□□□□ -1.2
SPIDR-208ENST00000518711 HTATSF1O43719 755 aaKnown RBP7.58□□□□□ -1.2
SPIDR-208ENST00000518711 HMOX1P09601 288 aa7.58□□□□□ -1.2
SPIDR-208ENST00000518711 CRAMP1Q96RY5 1269 aa7.58□□□□□ -1.2
SPIDR-208ENST00000518711 TRIM17Q9Y577 477 aa7.58□□□□□ -1.2
SPIDR-208ENST00000518711 NR2E3Q9Y5X4 410 aa7.58□□□□□ -1.2
SPIDR-208ENST00000518711 GJA3Q9Y6H8 435 aa7.58□□□□□ -1.2
SPIDR-208ENST00000518711 RIC1Q4ADV7 1423 aa7.58□□□□□ -1.2
SPIDR-208ENST00000518711 COL11A2P13942 1736 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-208ENST00000518711 BTBD11A6QL63 1104 aa7.57□□□□□ -1.2
SPIDR-208ENST00000518711 PER1O15534 1290 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-208ENST00000518711 SLC10A3P09131 477 aa7.57□□□□□ -1.2
SPIDR-208ENST00000518711 SCNN1DP51172 638 aa7.57□□□□□ -1.2
SPIDR-208ENST00000518711 CDC37L1Q7L3B6 337 aa7.57□□□□□ -1.2
SPIDR-208ENST00000518711 ADARB2Q9NS39 739 aaKnown RBP7.57□□□□□ -1.2
SPIDR-208ENST00000518711 NIP7Q9Y221 180 aaKnown RBP eCLIP7.57□□□□□ -1.2
SPIDR-208ENST00000518711 USP16Q9Y5T5 823 aa7.57□□□□□ -1.2
SPIDR-208ENST00000518711 U3KPZ7 1027 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-208ENST00000518711 IBTKQ9P2D0 1353 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-208ENST00000518711 WTIPA6NIX2 430 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-208ENST00000518711 C2orf69Q8N8R5 385 aa7.56□□□□□ -1.2
SPIDR-208ENST00000518711 RTFDC1Q9BY42 306 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-208ENST00000518711 GPRC5DQ9NZD1 345 aa7.56□□□□□ -1.2
SPIDR-208ENST00000518711 STAP2Q9UGK3 403 aa7.56□□□□□ -1.2
SPIDR-208ENST00000518711 ZBTB7BO15156 539 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-208ENST00000518711 HSPA5P11021 654 aaKnown RBP7.55□□□□□ -1.2
SPIDR-208ENST00000518711 GTF2E1P29083 439 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-208ENST00000518711 SLC4A8Q2Y0W8 1093 aa7.55□□□□□ -1.2
SPIDR-208ENST00000518711 OTOP1Q7RTM1 612 aa7.55□□□□□ -1.2
SPIDR-208ENST00000518711 LARGE2Q8N3Y3 721 aa7.55□□□□□ -1.2
SPIDR-208ENST00000518711 SUPT20HQ8NEM7 779 aa7.55□□□□□ -1.2
SPIDR-208ENST00000518711 RBM17Q96I25 401 aaKnown RBP7.55□□□□□ -1.2
SPIDR-208ENST00000518711 GUCD1Q96NT3 240 aa7.55□□□□□ -1.2
SPIDR-208ENST00000518711 TMX4Q9H1E5 349 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-208ENST00000518711 GBA2Q9HCG7 927 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-208ENST00000518711 ZNRF3Q9ULT6 936 aa7.55□□□□□ -1.2
SPIDR-208ENST00000518711 ZNF330Q9Y3S2 320 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-208ENST00000518711 SIPA1L3O60292 1781 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-208ENST00000518711 BCORQ6W2J9 1755 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 NBPF26B4DH59 902 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 BBOX1O75936 387 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 MRE11P49959 708 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 TNIP1Q15025 636 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 LRIT3Q3SXY7 679 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 TJAP1Q5JTD0 557 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 SLC10A5Q5PT55 438 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 NBPF10Q6P3W6 841 aaKnown RBP7.54□□□□□ -1.2
SPIDR-208ENST00000518711 NIM1KQ8IY84 436 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 POLR3GLQ9BT43 218 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 HTATIP2Q9BUP3 242 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 C1QTNF1Q9BXJ1 281 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 PTPN22Q9Y2R2 807 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 ATP6V0A2Q9Y487 856 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 HTTP42858 3142 aa7.54□□□□□ -1.2
SPIDR-208ENST00000518711 CENPFP49454 3210 aa7.53□□□□□ -1.2
SPIDR-208ENST00000518711 FOXK2Q01167 660 aa7.53□□□□□ -1.2
SPIDR-208ENST00000518711 TAF7Q15545 349 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-208ENST00000518711 OLFM4Q6UX06 510 aa7.53□□□□□ -1.2
SPIDR-208ENST00000518711 TMC4Q7Z404 712 aa7.53□□□□□ -1.2
SPIDR-208ENST00000518711 MAFAQ8NHW3 353 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-208ENST00000518711 PNISRQ8TF01 805 aaKnown RBP7.53□□□□□ -1.2
SPIDR-208ENST00000518711 NECTIN2Q92692 538 aa7.53□□□□□ -1.2
SPIDR-208ENST00000518711 DPF2Q92785 391 aa7.53□□□□□ -1.2
SPIDR-208ENST00000518711 RPGRQ92834 1020 aaKnown RBP7.53□□□□□ -1.2
SPIDR-208ENST00000518711 ZNF333Q96JL9 665 aa7.53□□□□□ -1.2
SPIDR-208ENST00000518711 CACNA1SQ13698 1873 aa7.53□□□□□ -1.2
SPIDR-208ENST00000518711 KCNQ3O43525 872 aa7.52□□□□□ -1.21
SPIDR-208ENST00000518711 CXCL9Q07325 125 aa7.52□□□□□ -1.21
SPIDR-208ENST00000518711 PARP10Q53GL7 1025 aa7.52□□□□□ -1.21
SPIDR-208ENST00000518711 USP48Q86UV5 1035 aa7.52□□□□□ -1.21
SPIDR-208ENST00000518711 SP8Q8IXZ3 490 aa7.52□□□□□ -1.21
SPIDR-208ENST00000518711 ZNF34Q8IZ26 560 aa7.52□□□□□ -1.21
SPIDR-208ENST00000518711 RTF1Q92541 710 aaKnown RBP7.52□□□□□ -1.21
SPIDR-208ENST00000518711 NUDCQ9Y266 331 aa7.52□□□□□ -1.21
SPIDR-208ENST00000518711 LAMA2P24043 3122 aaKnown RBP7.52□□□□□ -1.21
SPIDR-208ENST00000518711 MAP3K15Q6ZN16 1313 aa7.52□□□□□ -1.21
SPIDR-208ENST00000518711 IRS2Q9Y4H2 1338 aa7.52□□□□□ -1.21
SPIDR-208ENST00000518711 PPIP5K2O43314 1243 aa7.51□□□□□ -1.21
SPIDR-208ENST00000518711 BMP8BP34820 402 aa7.51□□□□□ -1.21
SPIDR-208ENST00000518711 BCAMP50895 628 aa7.51□□□□□ -1.21
SPIDR-208ENST00000518711 KIAA2012Q0VF49 1180 aa7.51□□□□□ -1.21
SPIDR-208ENST00000518711 HLFQ16534 295 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms