RNA–Protein interactions for RNA: ENST00000516965.1

SNORA48.10-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 160 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.10-201ENST00000516965 FRMD6Q96NE9 622 aa6.71□□□□□ -1.34
SNORA48.10-201ENST00000516965 C11orf16Q9NQ32 467 aa6.71□□□□□ -1.34
SNORA48.10-201ENST00000516965 VTI1BQ9UEU0 232 aa6.71□□□□□ -1.34
SNORA48.10-201ENST00000516965 USP20Q9Y2K6 914 aa6.71□□□□□ -1.34
SNORA48.10-201ENST00000516965 KCNMB2Q9Y691 235 aa6.71□□□□□ -1.34
SNORA48.10-201ENST00000516965 XYLBO75191 536 aa6.7□□□□□ -1.34
SNORA48.10-201ENST00000516965 TNFRSF21O75509 655 aa6.7□□□□□ -1.34
SNORA48.10-201ENST00000516965 TRIP4Q15650 581 aaPredicted RBP6.7□□□□□ -1.34
SNORA48.10-201ENST00000516965 TRIM22Q8IYM9 498 aa6.7□□□□□ -1.34
SNORA48.10-201ENST00000516965 ZSCAN1Q8NBB4 408 aa6.7□□□□□ -1.34
SNORA48.10-201ENST00000516965 FAM161BQ96MY7 647 aa6.7□□□□□ -1.34
SNORA48.10-201ENST00000516965 SETDB2Q96T68 719 aa6.7□□□□□ -1.34
SNORA48.10-201ENST00000516965 BACH2Q9BYV9 841 aa6.7□□□□□ -1.34
SNORA48.10-201ENST00000516965 ELP3Q9H9T3 547 aa6.7□□□□□ -1.34
SNORA48.10-201ENST00000516965 BRD7Q9NPI1 651 aa6.7□□□□□ -1.34
SNORA48.10-201ENST00000516965 STK17AQ9UEE5 414 aa6.7□□□□□ -1.34
SNORA48.10-201ENST00000516965 SPG7Q9UQ90 795 aa6.7□□□□□ -1.34
SNORA48.10-201ENST00000516965 PHACTR2O75167 634 aa6.69□□□□□ -1.34
SNORA48.10-201ENST00000516965 GPR161Q8N6U8 529 aaKnown RBP6.69□□□□□ -1.34
SNORA48.10-201ENST00000516965 COL25A1Q9BXS0 654 aaPredicted RBP6.69□□□□□ -1.34
SNORA48.10-201ENST00000516965 FOXD3Q9UJU5 478 aaPredicted RBP6.69□□□□□ -1.34
SNORA48.10-201ENST00000516965 SCAMP3O14828 347 aaKnown RBP6.68□□□□□ -1.34
SNORA48.10-201ENST00000516965 EGFRP00533 1210 aa6.68□□□□□ -1.34
SNORA48.10-201ENST00000516965 NLRP13Q86W25 1043 aa6.68□□□□□ -1.34
SNORA48.10-201ENST00000516965 CNTNAP3BQ96NU0 1288 aa6.68□□□□□ -1.34
SNORA48.10-201ENST00000516965 CFHR5Q9BXR6 569 aa6.68□□□□□ -1.34
SNORA48.10-201ENST00000516965 CNTNAP3Q9BZ76 1288 aa6.68□□□□□ -1.34
SNORA48.10-201ENST00000516965 NLRP2Q9NX02 1062 aa6.68□□□□□ -1.34
SNORA48.10-201ENST00000516965 KCNH4Q9UQ05 1017 aa6.68□□□□□ -1.34
SNORA48.10-201ENST00000516965 ATXN7O15265 892 aaPredicted RBP6.67□□□□□ -1.34
SNORA48.10-201ENST00000516965 FAM157BP0CG42 384 aa6.67□□□□□ -1.34
SNORA48.10-201ENST00000516965 KCNQ4P56696 695 aa6.67□□□□□ -1.34
SNORA48.10-201ENST00000516965 TMEM87AQ8NBN3 555 aa6.67□□□□□ -1.34
SNORA48.10-201ENST00000516965 TRERF1Q96PN7 1200 aa6.67□□□□□ -1.34
SNORA48.10-201ENST00000516965 ZCCHC2Q9C0B9 1178 aaKnown RBP6.67□□□□□ -1.34
SNORA48.10-201ENST00000516965 ZFYVE28Q9HCC9 887 aa6.67□□□□□ -1.34
SNORA48.10-201ENST00000516965 RNF19AQ9NV58 838 aa6.67□□□□□ -1.34
SNORA48.10-201ENST00000516965 CUEDC1Q9NWM3 386 aaPredicted RBP6.67□□□□□ -1.34
SNORA48.10-201ENST00000516965 ABI2Q9NYB9 513 aaPredicted RBP6.67□□□□□ -1.34
SNORA48.10-201ENST00000516965 TMEM63CQ9P1W3 806 aa6.67□□□□□ -1.34
SNORA48.10-201ENST00000516965 PCDHGC4Q9Y5F7 938 aa6.67□□□□□ -1.34
SNORA48.10-201ENST00000516965 GIPC1O14908 333 aa6.66□□□□□ -1.34
SNORA48.10-201ENST00000516965 GRNP28799 593 aaKnown RBP6.66□□□□□ -1.34
SNORA48.10-201ENST00000516965 DBN1Q16643 649 aa6.66□□□□□ -1.34
SNORA48.10-201ENST00000516965 TTC39BQ5VTQ0 682 aaPredicted RBP6.66□□□□□ -1.34
SNORA48.10-201ENST00000516965 PMEPA1Q969W9 287 aa6.66□□□□□ -1.34
SNORA48.10-201ENST00000516965 CCDC74AQ96AQ1 378 aa6.66□□□□□ -1.34
SNORA48.10-201ENST00000516965 ZNF837Q96EG3 531 aaPredicted RBP6.66□□□□□ -1.34
SNORA48.10-201ENST00000516965 NUCKS1Q9H1E3 243 aaKnown RBP6.66□□□□□ -1.34
SNORA48.10-201ENST00000516965 AK5Q9Y6K8 562 aa6.66□□□□□ -1.34
SNORA48.10-201ENST00000516965 KHNYNO15037 678 aaKnown RBP6.65□□□□□ -1.34
SNORA48.10-201ENST00000516965 EIF4BP23588 611 aaKnown RBP6.65□□□□□ -1.34
SNORA48.10-201ENST00000516965 LAMC2Q13753 1193 aa6.65□□□□□ -1.34
SNORA48.10-201ENST00000516965 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
SNORA48.10-201ENST00000516965 USPL1Q5W0Q7 1092 aa6.65□□□□□ -1.34
SNORA48.10-201ENST00000516965 GTPBP3Q969Y2 492 aaKnown RBP6.65□□□□□ -1.34
SNORA48.10-201ENST00000516965 CRELD1Q96HD1 420 aa6.65□□□□□ -1.34
SNORA48.10-201ENST00000516965 DCDC2BA2VCK2 349 aa6.64□□□□□ -1.35
SNORA48.10-201ENST00000516965 CES1P23141 567 aa6.64□□□□□ -1.35
SNORA48.10-201ENST00000516965 KRT76Q01546 638 aa6.64□□□□□ -1.35
SNORA48.10-201ENST00000516965 CCINQ13939 588 aa6.64□□□□□ -1.35
SNORA48.10-201ENST00000516965 METTL5Q9NRN9 209 aaKnown RBP6.64□□□□□ -1.35
SNORA48.10-201ENST00000516965 EFSO43281 561 aa6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 SFSWAPQ12872 951 aaKnown RBP6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 RNFT1Q5M7Z0 435 aa6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 LDLRAD1Q5T700 205 aa6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 C1orf127Q8N9H9 656 aa6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 EPS8L3Q8TE67 593 aaKnown RBP6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 PNMA5Q96PV4 448 aa6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 CHRDQ9H2X0 955 aa6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 C12orf49Q9H741 205 aa6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 EFCC1Q9HA90 598 aa6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 NPHS2Q9NP85 383 aa6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 CNTN3Q9P232 1028 aa6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 PHF24Q9UPV7 400 aa6.63□□□□□ -1.35
SNORA48.10-201ENST00000516965 PHF20L1A8MW92 1017 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 EREGO14944 169 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 GADD45BO75293 160 aaPredicted RBP6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 SASH3O75995 380 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 POLR3DP05423 398 aaPredicted RBP6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 RARAP10276 462 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 MAPTP10636 758 aaKnown RBP6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 ERCC5P28715 1186 aaPredicted RBP6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 IRS1P35568 1242 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 ZNF76P36508 570 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 ZC3H6P61129 1189 aaKnown RBP6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 HDLBPQ00341 1268 aaKnown RBP6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 TNP2Q05952 138 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 KRT25Q7Z3Z0 450 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 GALNT12Q8IXK2 581 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 RNF34Q969K3 372 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 C8orf37Q96NL8 207 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 SRCIN1Q9C0H9 1055 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 MBIPQ9NS73 344 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 MARK1Q9P0L2 795 aa6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 NSFL1CQ9UNZ2 370 aaKnown RBP6.62□□□□□ -1.35
SNORA48.10-201ENST00000516965 GPR25O00155 361 aa6.61□□□□□ -1.35
SNORA48.10-201ENST00000516965 THBS1P07996 1170 aa6.61□□□□□ -1.35
SNORA48.10-201ENST00000516965 SLURP2P0DP57 97 aa6.61□□□□□ -1.35
SNORA48.10-201ENST00000516965 EDN3P14138 238 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms