RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 EGFRP00533 1210 aa5.5□□□□□ -1.53
SCARNA16.2-201ENST00000516520 NRG1Q02297 640 aaPredicted RBP5.5□□□□□ -1.53
SCARNA16.2-201ENST00000516520 KRT25Q7Z3Z0 450 aa5.5□□□□□ -1.53
SCARNA16.2-201ENST00000516520 TREML1Q86YW5 311 aa5.5□□□□□ -1.53
SCARNA16.2-201ENST00000516520 PRIMPOLQ96LW4 560 aa5.5□□□□□ -1.53
SCARNA16.2-201ENST00000516520 LRFN2Q9ULH4 789 aa5.5□□□□□ -1.53
SCARNA16.2-201ENST00000516520 RTCBQ9Y3I0 505 aaKnown RBP5.5□□□□□ -1.53
SCARNA16.2-201ENST00000516520 PRMT3O60678 531 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 CPB1P15086 417 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 BRD2P25440 801 aaKnown RBP5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 TARSP26639 723 aaKnown RBP5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 NRLP54845 237 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 GRIK4Q16099 956 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 OCLNQ16625 522 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 COX20Q5RI15 118 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 C16orf46Q6P387 395 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 ELMSAN1Q6PJG2 1045 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 DTWD1Q8N5C7 304 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 TTC9Q92623 222 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 CCDC97Q96F63 343 aaPredicted RBP5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 LPIN3Q9BQK8 851 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 SEMA6BQ9H3T3 888 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 FAM13BQ9NYF5 915 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 ZFATQ9P243 1243 aa5.49□□□□□ -1.53
SCARNA16.2-201ENST00000516520 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 OPLAHO14841 1288 aa5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 PTCD1O75127 700 aaKnown RBP5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 XYLBO75191 536 aa5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 SASH3O75995 380 aa5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 PERM1Q5SV97 790 aa5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 MSL1Q68DK7 614 aa5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 RGL4Q8IZJ4 473 aa5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 FMR1NBQ8N0W7 255 aaPredicted RBP5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 CMTR1Q8N1G2 835 aaKnown RBP5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 STK32AQ8WU08 396 aa5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 LENG1Q96BZ8 264 aaPredicted RBP5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 ZMYND15Q9H091 742 aa5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 TPSG1Q9NRR2 321 aa5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 TLR7Q9NYK1 1049 aaKnown RBP5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 CXXC1Q9P0U4 656 aaPredicted RBP5.48□□□□□ -1.53
SCARNA16.2-201ENST00000516520 PSAPP07602 524 aa5.47□□□□□ -1.53
SCARNA16.2-201ENST00000516520 EIF2AK2P19525 551 aaKnown RBP5.47□□□□□ -1.53
SCARNA16.2-201ENST00000516520 SRPK2P78362 688 aaKnown RBP5.47□□□□□ -1.53
SCARNA16.2-201ENST00000516520 PLAURQ03405 335 aa5.47□□□□□ -1.53
SCARNA16.2-201ENST00000516520 FAM69CQ0P6D2 419 aa5.47□□□□□ -1.53
SCARNA16.2-201ENST00000516520 ADGRE1Q14246 886 aa5.47□□□□□ -1.53
SCARNA16.2-201ENST00000516520 MBTPS1Q14703 1052 aa5.47□□□□□ -1.53
SCARNA16.2-201ENST00000516520 RSPO4Q2I0M5 234 aaPredicted RBP5.47□□□□□ -1.53
SCARNA16.2-201ENST00000516520 TXNRD3Q86VQ6 643 aa5.47□□□□□ -1.53
SCARNA16.2-201ENST00000516520 WFDC8Q8IUA0 241 aa5.47□□□□□ -1.53
SCARNA16.2-201ENST00000516520 DMRTC2Q8IXT2 367 aaPredicted RBP5.47□□□□□ -1.53
SCARNA16.2-201ENST00000516520 PBXIP1Q96AQ6 731 aa5.47□□□□□ -1.53
SCARNA16.2-201ENST00000516520 ZBTB42B2RXF5 422 aa5.46□□□□□ -1.54
SCARNA16.2-201ENST00000516520 HOXD8P13378 290 aaPredicted RBP5.46□□□□□ -1.54
SCARNA16.2-201ENST00000516520 SELPP16109 830 aa5.46□□□□□ -1.54
SCARNA16.2-201ENST00000516520 SOX18P35713 384 aa5.46□□□□□ -1.54
SCARNA16.2-201ENST00000516520 MLLT1Q03111 559 aaPredicted RBP5.46□□□□□ -1.54
SCARNA16.2-201ENST00000516520 NKAPLQ5M9Q1 402 aa5.46□□□□□ -1.54
SCARNA16.2-201ENST00000516520 ILDR2Q71H61 639 aa5.46□□□□□ -1.54
SCARNA16.2-201ENST00000516520 CLP1Q92989 425 aaKnown RBP5.46□□□□□ -1.54
SCARNA16.2-201ENST00000516520 RBSNQ9H1K0 784 aa5.46□□□□□ -1.54
SCARNA16.2-201ENST00000516520 SERPINA10Q9UK55 444 aa5.46□□□□□ -1.54
SCARNA16.2-201ENST00000516520 DYRK3O43781 588 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 GHRHP01286 108 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 GRIK5Q16478 980 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 TMEM164Q5U3C3 297 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 NLRP13Q86W25 1043 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 FBXO11Q86XK2 927 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 ETFBKMTQ8IXQ9 262 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 DCAF11Q8TEB1 546 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 PIK3R5Q8WYR1 880 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 MKNK1Q9BUB5 465 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 SMG9Q9H0W8 520 aaKnown RBP5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 USP21Q9UK80 565 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 USP20Q9Y2K6 914 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 KCNMB2Q9Y691 235 aa5.45□□□□□ -1.54
SCARNA16.2-201ENST00000516520 LOC102724428A0A0B4J2F2 783 aa5.44□□□□□ -1.54
SCARNA16.2-201ENST00000516520 MMP20O60882 483 aa5.44□□□□□ -1.54
SCARNA16.2-201ENST00000516520 SIK1P57059 783 aa5.44□□□□□ -1.54
SCARNA16.2-201ENST00000516520 XP32Q5T750 250 aa5.44□□□□□ -1.54
SCARNA16.2-201ENST00000516520 CACTIN-AS1Q8N1I8 211 aa5.44□□□□□ -1.54
SCARNA16.2-201ENST00000516520 ABTB2Q8N961 1025 aa5.44□□□□□ -1.54
SCARNA16.2-201ENST00000516520 PLD4Q96BZ4 506 aa5.44□□□□□ -1.54
SCARNA16.2-201ENST00000516520 SAP130Q9H0E3 1048 aa5.44□□□□□ -1.54
SCARNA16.2-201ENST00000516520 SRA1Q9HD15 236 aaKnown RBP5.44□□□□□ -1.54
SCARNA16.2-201ENST00000516520 FNDC3AQ9Y2H6 1198 aaKnown RBP5.44□□□□□ -1.54
SCARNA16.2-201ENST00000516520 TNFRSF10BO14763 440 aa5.43□□□□□ -1.54
SCARNA16.2-201ENST00000516520 H2AFB1P0C5Y9 115 aa5.43□□□□□ -1.54
SCARNA16.2-201ENST00000516520 H2AFB2P0C5Z0 115 aa5.43□□□□□ -1.54
SCARNA16.2-201ENST00000516520 ITGB7P26010 798 aa5.43□□□□□ -1.54
SCARNA16.2-201ENST00000516520 ZMYM1Q5SVZ6 1142 aa5.43□□□□□ -1.54
SCARNA16.2-201ENST00000516520 SHISA2Q6UWI4 295 aa5.43□□□□□ -1.54
SCARNA16.2-201ENST00000516520 HFE2Q6ZVN8 426 aa5.43□□□□□ -1.54
SCARNA16.2-201ENST00000516520 Q8N3U1 123 aa5.43□□□□□ -1.54
SCARNA16.2-201ENST00000516520 NSUN5Q96P11 429 aaKnown RBP5.43□□□□□ -1.54
SCARNA16.2-201ENST00000516520 UBAP1LF5GYI3 381 aa5.42□□□□□ -1.54
SCARNA16.2-201ENST00000516520 ZAP70P43403 619 aa5.42□□□□□ -1.54
SCARNA16.2-201ENST00000516520 TRIP4Q15650 581 aaPredicted RBP5.42□□□□□ -1.54
SCARNA16.2-201ENST00000516520 IGF2-ASQ6U949 168 aa5.42□□□□□ -1.54
SCARNA16.2-201ENST00000516520 MAP4K3Q8IVH8 894 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms