RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-222ENST00000515494 GOLGA6L3A6NEY3 463 aa12.72□□□□□ -0.37
CDK18-222ENST00000515494 SGSM2O43147 1006 aa12.72□□□□□ -0.37
CDK18-222ENST00000515494 DIAPH3Q9NSV4 1193 aa12.72□□□□□ -0.37
CDK18-222ENST00000515494 USP42Q9H9J4 1324 aaKnown RBP12.72□□□□□ -0.37
CDK18-222ENST00000515494 GIGYF2Q6Y7W6 1299 aaKnown RBP12.72□□□□□ -0.37
CDK18-222ENST00000515494 CCDC191Q8NCU4 936 aa12.72□□□□□ -0.37
CDK18-222ENST00000515494 TRMT112Q9UI30 125 aaKnown RBP12.72□□□□□ -0.37
CDK18-222ENST00000515494 DBNLQ9UJU6 430 aaKnown RBP12.72□□□□□ -0.37
CDK18-222ENST00000515494 ZHX1Q9UKY1 873 aaPredicted RBP12.72□□□□□ -0.37
CDK18-222ENST00000515494 ST18O60284 1047 aa12.71□□□□□ -0.37
CDK18-222ENST00000515494 ZGPATQ8N5A5 531 aaKnown RBP12.71□□□□□ -0.37
CDK18-222ENST00000515494 FAM227BQ96M60 508 aa12.71□□□□□ -0.37
CDK18-222ENST00000515494 ISCA1Q9BUE6 129 aa12.71□□□□□ -0.37
CDK18-222ENST00000515494 PANK2Q9BZ23 570 aa12.71□□□□□ -0.37
CDK18-222ENST00000515494 CHGBP05060 677 aa12.71□□□□□ -0.37
CDK18-222ENST00000515494 DBNDD2Q9BQY9 259 aa12.71□□□□□ -0.37
CDK18-222ENST00000515494 PHF14O94880 888 aa12.71□□□□□ -0.38
CDK18-222ENST00000515494 LRRC24Q50LG9 513 aa12.71□□□□□ -0.38
CDK18-222ENST00000515494 TNNI3KQ59H18 835 aa12.71□□□□□ -0.38
CDK18-222ENST00000515494 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.38
CDK18-222ENST00000515494 FPGT-TNNI3KV9GXZ4 949 aa12.71□□□□□ -0.38
CDK18-222ENST00000515494 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
CDK18-222ENST00000515494 IL6STP40189 918 aaPredicted RBP12.7□□□□□ -0.38
CDK18-222ENST00000515494 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
CDK18-222ENST00000515494 NLRP10Q86W26 655 aa12.7□□□□□ -0.38
CDK18-222ENST00000515494 CCDC24Q8N4L8 307 aa12.7□□□□□ -0.38
CDK18-222ENST00000515494 PUS3Q9BZE2 481 aaKnown RBP12.7□□□□□ -0.38
CDK18-222ENST00000515494 HCLS1P14317 486 aaPredicted RBP12.7□□□□□ -0.38
CDK18-222ENST00000515494 MCCP23508 829 aa12.7□□□□□ -0.38
CDK18-222ENST00000515494 MCM4P33991 863 aa12.7□□□□□ -0.38
CDK18-222ENST00000515494 PTH1RQ03431 593 aa12.7□□□□□ -0.38
CDK18-222ENST00000515494 TNPO1Q92973 898 aaKnown RBP12.7□□□□□ -0.38
CDK18-222ENST00000515494 NEUROD6Q96NK8 337 aa12.7□□□□□ -0.38
CDK18-222ENST00000515494 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
CDK18-222ENST00000515494 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
CDK18-222ENST00000515494 TRIM37O94972 964 aa12.7□□□□□ -0.38
CDK18-222ENST00000515494 TIMM10P62072 90 aa12.7□□□□□ -0.38
CDK18-222ENST00000515494 PKP1Q13835 747 aa12.7□□□□□ -0.38
CDK18-222ENST00000515494 RASEFQ8IZ41 740 aa12.7□□□□□ -0.38
CDK18-222ENST00000515494 TRIM44Q96DX7 344 aaPredicted RBP12.7□□□□□ -0.38
CDK18-222ENST00000515494 LSG1Q9H089 658 aaKnown RBP12.69□□□□□ -0.38
CDK18-222ENST00000515494 XRCC6P12956 609 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK18-222ENST00000515494 SSFA2P28290 1259 aa12.69□□□□□ -0.38
CDK18-222ENST00000515494 KIAA1211Q6ZU35 1233 aa12.69□□□□□ -0.38
CDK18-222ENST00000515494 AMIGO3Q86WK7 504 aa12.69□□□□□ -0.38
CDK18-222ENST00000515494 EVI5LQ96CN4 794 aa12.69□□□□□ -0.38
CDK18-222ENST00000515494 DNAJC2Q99543 621 aaKnown RBP12.69□□□□□ -0.38
CDK18-222ENST00000515494 FSD1Q9BTV5 496 aa12.69□□□□□ -0.38
CDK18-222ENST00000515494 UBN2Q6ZU65 1347 aa12.69□□□□□ -0.38
CDK18-222ENST00000515494 GNPATO15228 680 aa12.69□□□□□ -0.38
CDK18-222ENST00000515494 CPA1P15085 419 aa12.69□□□□□ -0.38
CDK18-222ENST00000515494 ATG9AQ7Z3C6 839 aa12.69□□□□□ -0.38
CDK18-222ENST00000515494 SRP68Q9UHB9 627 aaKnown RBP12.69□□□□□ -0.38
CDK18-222ENST00000515494 NMIQ13287 307 aaPredicted RBP12.68□□□□□ -0.38
CDK18-222ENST00000515494 NIP7Q9Y221 180 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDK18-222ENST00000515494 MYH14Q7Z406 1995 aaKnown RBP12.68□□□□□ -0.38
CDK18-222ENST00000515494 HSPA4P34932 840 aa12.68□□□□□ -0.38
CDK18-222ENST00000515494 TAF7LQ5H9L4 462 aa12.68□□□□□ -0.38
CDK18-222ENST00000515494 RAD50Q92878 1312 aa12.68□□□□□ -0.38
CDK18-222ENST00000515494 IRS4O14654 1257 aaPredicted RBP12.68□□□□□ -0.38
CDK18-222ENST00000515494 DTNBO60941 627 aa12.68□□□□□ -0.38
CDK18-222ENST00000515494 TPM2P07951 284 aa12.68□□□□□ -0.38
CDK18-222ENST00000515494 SUSD4Q5VX71 490 aa12.68□□□□□ -0.38
CDK18-222ENST00000515494 FAM13BQ9NYF5 915 aa12.68□□□□□ -0.38
CDK18-222ENST00000515494 NAP1L2Q9ULW6 460 aaPredicted RBP12.68□□□□□ -0.38
CDK18-222ENST00000515494 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.67□□□□□ -0.38
CDK18-222ENST00000515494 A0A0D9SFI3 127 aa12.67□□□□□ -0.38
CDK18-222ENST00000515494 TMX3Q96JJ7 454 aa12.67□□□□□ -0.38
CDK18-222ENST00000515494 CCDC57Q2TAC2 916 aa12.67□□□□□ -0.38
CDK18-222ENST00000515494 SLFNL1Q499Z3 407 aa12.67□□□□□ -0.38
CDK18-222ENST00000515494 FOXD4L5Q5VV16 416 aaPredicted RBP12.67□□□□□ -0.38
CDK18-222ENST00000515494 ZBTB38Q8NAP3 1195 aaPredicted RBP12.67□□□□□ -0.38
CDK18-222ENST00000515494 FOXD4L4Q8WXT5 416 aaPredicted RBP12.67□□□□□ -0.38
CDK18-222ENST00000515494 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
CDK18-222ENST00000515494 NUP188Q5SRE5 1749 aa12.66□□□□□ -0.38
CDK18-222ENST00000515494 RAB3GAP1Q15042 981 aa12.66□□□□□ -0.38
CDK18-222ENST00000515494 PRPF40BQ6NWY9 871 aaKnown RBP12.66□□□□□ -0.38
CDK18-222ENST00000515494 DDX46Q7L014 1031 aaKnown RBP12.66□□□□□ -0.38
CDK18-222ENST00000515494 GREM2Q9H772 168 aa12.66□□□□□ -0.38
CDK18-222ENST00000515494 ESPNB1AK53 854 aa12.66□□□□□ -0.38
CDK18-222ENST00000515494 CAMTA2O94983 1202 aa12.66□□□□□ -0.38
CDK18-222ENST00000515494 PRDM10Q9NQV6 1147 aa12.66□□□□□ -0.38
CDK18-222ENST00000515494 TJP1Q07157 1748 aa12.66□□□□□ -0.38
CDK18-222ENST00000515494 PCCAP05165 728 aaPredicted RBP12.66□□□□□ -0.38
CDK18-222ENST00000515494 KRT27Q7Z3Y8 459 aa12.66□□□□□ -0.38
CDK18-222ENST00000515494 COL9A3Q14050 684 aaPredicted RBP12.65□□□□□ -0.38
CDK18-222ENST00000515494 RUFY2Q8WXA3 655 aa12.65□□□□□ -0.38
CDK18-222ENST00000515494 CHAMP1Q96JM3 812 aa12.65□□□□□ -0.38
CDK18-222ENST00000515494 ATRNO75882 1429 aa12.65□□□□□ -0.38
CDK18-222ENST00000515494 COL15A1P39059 1388 aa12.65□□□□□ -0.38
CDK18-222ENST00000515494 ANAPC15P60006 121 aa12.65□□□□□ -0.38
CDK18-222ENST00000515494 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
CDK18-222ENST00000515494 ZNF589Q86UQ0 364 aaPredicted RBP12.65□□□□□ -0.38
CDK18-222ENST00000515494 EYA2O00167 538 aa12.65□□□□□ -0.39
CDK18-222ENST00000515494 ADCK5Q3MIX3 580 aa12.65□□□□□ -0.39
CDK18-222ENST00000515494 HSP90AB3PQ58FF7 597 aa12.65□□□□□ -0.39
CDK18-222ENST00000515494 HELBQ8NG08 1087 aaPredicted RBP12.65□□□□□ -0.39
CDK18-222ENST00000515494 SEC62Q99442 399 aaKnown RBP12.65□□□□□ -0.39
CDK18-222ENST00000515494 LRRC4BQ9NT99 713 aa12.65□□□□□ -0.39
CDK18-222ENST00000515494 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms