RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 C11orf16Q9NQ32 467 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 GJA3Q9Y6H8 435 aa6.4□□□□□ -1.38
HERC6-208ENST00000515365 XYLBO75191 536 aa6.39□□□□□ -1.39
HERC6-208ENST00000515365 SMCPP49901 116 aaPredicted RBP6.39□□□□□ -1.39
HERC6-208ENST00000515365 CTC1Q2NKJ3 1217 aa6.39□□□□□ -1.39
HERC6-208ENST00000515365 DRC1Q96MC2 740 aa6.39□□□□□ -1.39
HERC6-208ENST00000515365 OSBPL7Q9BZF2 842 aa6.39□□□□□ -1.39
HERC6-208ENST00000515365 TGIF2Q9GZN2 237 aa6.39□□□□□ -1.39
HERC6-208ENST00000515365 DNMT3LQ9UJW3 386 aa6.39□□□□□ -1.39
HERC6-208ENST00000515365 RGS20O76081 388 aa6.38□□□□□ -1.39
HERC6-208ENST00000515365 KCNQ4P56696 695 aa6.38□□□□□ -1.39
HERC6-208ENST00000515365 NLRP13Q86W25 1043 aa6.38□□□□□ -1.39
HERC6-208ENST00000515365 PGBD3Q8N328 593 aa6.38□□□□□ -1.39
HERC6-208ENST00000515365 C1orf127Q8N9H9 656 aa6.38□□□□□ -1.39
HERC6-208ENST00000515365 ZFP42Q96MM3 310 aa6.38□□□□□ -1.39
HERC6-208ENST00000515365 NPHS2Q9NP85 383 aa6.38□□□□□ -1.39
HERC6-208ENST00000515365 BRD7Q9NPI1 651 aa6.38□□□□□ -1.39
HERC6-208ENST00000515365 NLRP2Q9NX02 1062 aa6.38□□□□□ -1.39
HERC6-208ENST00000515365 CNTN3Q9P232 1028 aa6.38□□□□□ -1.39
HERC6-208ENST00000515365 SENP3-EIF4A1A0A087X0R7 540 aa6.37□□□□□ -1.39
HERC6-208ENST00000515365 POLR3DP05423 398 aaPredicted RBP6.37□□□□□ -1.39
HERC6-208ENST00000515365 SF3A1Q15459 793 aaKnown RBP6.37□□□□□ -1.39
HERC6-208ENST00000515365 GALNT12Q8IXK2 581 aa6.37□□□□□ -1.39
HERC6-208ENST00000515365 TINF2Q9BSI4 451 aa6.37□□□□□ -1.39
HERC6-208ENST00000515365 ZCCHC2Q9C0B9 1178 aaKnown RBP6.37□□□□□ -1.39
HERC6-208ENST00000515365 SRCIN1Q9C0H9 1055 aa6.37□□□□□ -1.39
HERC6-208ENST00000515365 ABI2Q9NYB9 513 aaPredicted RBP6.37□□□□□ -1.39
HERC6-208ENST00000515365 FAM8A1Q9UBU6 413 aa6.37□□□□□ -1.39
HERC6-208ENST00000515365 USP31Q70CQ4 1352 aa6.36□□□□□ -1.39
HERC6-208ENST00000515365 EREGO14944 169 aa6.36□□□□□ -1.39
HERC6-208ENST00000515365 FAM157BP0CG42 384 aa6.36□□□□□ -1.39
HERC6-208ENST00000515365 VEGFBP49765 207 aa6.36□□□□□ -1.39
HERC6-208ENST00000515365 PTPN12Q05209 780 aaKnown RBP6.36□□□□□ -1.39
HERC6-208ENST00000515365 LBRQ14739 615 aaKnown RBP6.36□□□□□ -1.39
HERC6-208ENST00000515365 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.36□□□□□ -1.39
HERC6-208ENST00000515365 EFHC2Q5JST6 749 aa6.36□□□□□ -1.39
HERC6-208ENST00000515365 CRIPAKQ8N1N5 446 aa6.36□□□□□ -1.39
HERC6-208ENST00000515365 GAS2L1Q99501 681 aaPredicted RBP6.36□□□□□ -1.39
HERC6-208ENST00000515365 CCSER2Q9H7U1 834 aa6.36□□□□□ -1.39
HERC6-208ENST00000515365 BICRAQ9NZM4 1560 aa6.35□□□□□ -1.39
HERC6-208ENST00000515365 EFSO43281 561 aa6.35□□□□□ -1.39
HERC6-208ENST00000515365 DGAT1O75907 488 aa6.35□□□□□ -1.39
HERC6-208ENST00000515365 THBS1P07996 1170 aa6.35□□□□□ -1.39
HERC6-208ENST00000515365 USP17L7P0C7H9 530 aa6.35□□□□□ -1.39
HERC6-208ENST00000515365 PMEPA1Q969W9 287 aa6.35□□□□□ -1.39
HERC6-208ENST00000515365 BCO2Q9BYV7 579 aa6.35□□□□□ -1.39
HERC6-208ENST00000515365 DDX41Q9UJV9 622 aaKnown RBP6.35□□□□□ -1.39
HERC6-208ENST00000515365 KCNH4Q9UQ05 1017 aa6.35□□□□□ -1.39
HERC6-208ENST00000515365 SPATA31D1Q6ZQQ2 1576 aa6.35□□□□□ -1.39
HERC6-208ENST00000515365 POTECB2RU33 542 aa6.34□□□□□ -1.39
HERC6-208ENST00000515365 CES1P23141 567 aa6.34□□□□□ -1.39
HERC6-208ENST00000515365 ST13P50502 369 aaKnown RBP6.34□□□□□ -1.39
HERC6-208ENST00000515365 GRM2Q14416 872 aa6.34□□□□□ -1.39
HERC6-208ENST00000515365 TAF1CQ15572 869 aaPredicted RBP6.34□□□□□ -1.39
HERC6-208ENST00000515365 MEI1Q5TIA1 1274 aa6.34□□□□□ -1.39
HERC6-208ENST00000515365 TTC39BQ5VTQ0 682 aaPredicted RBP6.34□□□□□ -1.39
HERC6-208ENST00000515365 FIGNL1Q6PIW4 674 aa6.34□□□□□ -1.39
HERC6-208ENST00000515365 NXPE4Q6UWF7 544 aa6.34□□□□□ -1.39
HERC6-208ENST00000515365 SLC43A3Q8NBI5 491 aa6.34□□□□□ -1.39
HERC6-208ENST00000515365 ACBD3Q9H3P7 528 aa6.34□□□□□ -1.39
HERC6-208ENST00000515365 SUV39H2Q9H5I1 410 aa6.34□□□□□ -1.39
HERC6-208ENST00000515365 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.34□□□□□ -1.39
HERC6-208ENST00000515365 HECW2Q9P2P5 1572 aa6.33□□□□□ -1.4
HERC6-208ENST00000515365 AXIN1O15169 862 aa6.33□□□□□ -1.4
HERC6-208ENST00000515365 ATXN7O15265 892 aaPredicted RBP6.33□□□□□ -1.4
HERC6-208ENST00000515365 GADD45BO75293 160 aaPredicted RBP6.33□□□□□ -1.4
HERC6-208ENST00000515365 SASH3O75995 380 aa6.33□□□□□ -1.4
HERC6-208ENST00000515365 CYP2E1P05181 493 aaPredicted RBP6.33□□□□□ -1.4
HERC6-208ENST00000515365 SFSWAPQ12872 951 aaKnown RBP6.33□□□□□ -1.4
HERC6-208ENST00000515365 CCINQ13939 588 aa6.33□□□□□ -1.4
HERC6-208ENST00000515365 UBAP2LQ14157 1087 aaKnown RBP6.33□□□□□ -1.4
HERC6-208ENST00000515365 PKDCCQ504Y2 493 aa6.33□□□□□ -1.4
HERC6-208ENST00000515365 KIAA0319Q5VV43 1072 aa6.33□□□□□ -1.4
HERC6-208ENST00000515365 HS2ST1Q7LGA3 356 aa6.33□□□□□ -1.4
HERC6-208ENST00000515365 OR13H1Q8NG92 308 aa6.33□□□□□ -1.4
HERC6-208ENST00000515365 UBXN4Q92575 508 aa6.33□□□□□ -1.4
HERC6-208ENST00000515365 GSX2Q9BZM3 304 aa6.33□□□□□ -1.4
HERC6-208ENST00000515365 CAPN10Q9HC96 672 aa6.33□□□□□ -1.4
HERC6-208ENST00000515365 PCDHGC4Q9Y5F7 938 aa6.33□□□□□ -1.4
HERC6-208ENST00000515365 MAN1A2O60476 641 aa6.32□□□□□ -1.4
HERC6-208ENST00000515365 RACK1P63244 317 aaKnown RBP6.32□□□□□ -1.4
HERC6-208ENST00000515365 LAMC2Q13753 1193 aa6.32□□□□□ -1.4
HERC6-208ENST00000515365 ZNF394Q53GI3 561 aa6.32□□□□□ -1.4
HERC6-208ENST00000515365 PEAR1Q5VY43 1037 aaPredicted RBP6.32□□□□□ -1.4
HERC6-208ENST00000515365 ZNF654Q8IZM8 581 aa6.32□□□□□ -1.4
HERC6-208ENST00000515365 SRA1Q9HD15 236 aaKnown RBP6.32□□□□□ -1.4
HERC6-208ENST00000515365 PCDHGB7Q9Y5F8 929 aa6.32□□□□□ -1.4
HERC6-208ENST00000515365 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.32□□□□□ -1.4
HERC6-208ENST00000515365 ARHGEF11O15085 1522 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 A0A1W2PP55 124 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 DCDC2BA2VCK2 349 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 SLC35F4A4IF30 521 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 MMP20O60882 483 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 EDN3P14138 238 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 TARSP26639 723 aaKnown RBP6.31□□□□□ -1.4
HERC6-208ENST00000515365 TNNI2P48788 182 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 TNP2Q05952 138 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 RIPOR1Q6ZS17 1223 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 KRT25Q7Z3Z0 450 aa6.31□□□□□ -1.4
HERC6-208ENST00000515365 USP48Q86UV5 1035 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms