RNA–Protein interactions for RNA: ENST00000515332.5

SGMS2-209, Transcript of sphingomyelin synthase 2, human

TSL 3

Gene SGMS2, Length 498 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGMS2-209	ENST00000515332	CDHR2	Q9BYE9	1310 aa		32.23	■■■□□ 2.75
SGMS2-209	ENST00000515332	PARP10	Q53GL7	1025 aa		32.22	■■■□□ 2.75
SGMS2-209	ENST00000515332	SHTN1	A0MZ66	631 aa		32.21	■■■□□ 2.75
SGMS2-209	ENST00000515332	KIAA2012	Q0VF49	1180 aa		32.21	■■■□□ 2.75
SGMS2-209	ENST00000515332	NOG	Q13253	232 aa		32.21	■■■□□ 2.75
SGMS2-209	ENST00000515332	UTP14A	Q9BVJ6	771 aa	Known RBP	32.21	■■■□□ 2.75
SGMS2-209	ENST00000515332	TNIP1	Q15025	636 aa		32.2	■■■□□ 2.75
SGMS2-209	ENST00000515332	SLC10A5	Q5PT55	438 aa		32.2	■■■□□ 2.75
SGMS2-209	ENST00000515332	MPND	Q8N594	471 aa		32.2	■■■□□ 2.75
SGMS2-209	ENST00000515332	DLK2	Q6UY11	383 aa		32.19	■■■□□ 2.74
SGMS2-209	ENST00000515332	USP48	Q86UV5	1035 aa		32.19	■■■□□ 2.74
SGMS2-209	ENST00000515332	SP8	Q8IXZ3	490 aa		32.19	■■■□□ 2.74
SGMS2-209	ENST00000515332	THUMPD2	Q9BTF0	503 aa	Known RBP	32.19	■■■□□ 2.74
SGMS2-209	ENST00000515332	CNOT7	Q9UIV1	285 aa	Known RBP	32.19	■■■□□ 2.74
SGMS2-209	ENST00000515332	DLG5	Q8TDM6	1919 aa		32.19	■■■□□ 2.74
SGMS2-209	ENST00000515332	HUNK	P57058	714 aa		32.18	■■■□□ 2.74
SGMS2-209	ENST00000515332	BBOX1	O75936	387 aa		32.17	■■■□□ 2.74
SGMS2-209	ENST00000515332	YDJC	A8MPS7	323 aa		32.15	■■■□□ 2.74
SGMS2-209	ENST00000515332		H7C1D1	291 aa		32.15	■■■□□ 2.74
SGMS2-209	ENST00000515332	ERBB4	Q15303	1308 aa		32.15	■■■□□ 2.74
SGMS2-209	ENST00000515332	NEFM	P07197	916 aa		32.14	■■■□□ 2.74
SGMS2-209	ENST00000515332	MICALL2	Q8IY33	904 aa		32.14	■■■□□ 2.74
SGMS2-209	ENST00000515332	HCLS1	P14317	486 aa	Predicted RBP	32.13	■■■□□ 2.73
SGMS2-209	ENST00000515332	LAMB2	P55268	1798 aa		32.13	■■■□□ 2.73
SGMS2-209	ENST00000515332	LRP10	Q7Z4F1	713 aa		32.13	■■■□□ 2.73
SGMS2-209	ENST00000515332	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.12	■■■□□ 2.73
SGMS2-209	ENST00000515332	PDIA6	Q15084	440 aa		32.11	■■■□□ 2.73
SGMS2-209	ENST00000515332	DDX46	Q7L014	1031 aa	Known RBP	32.11	■■■□□ 2.73
SGMS2-209	ENST00000515332	FAM155A	B1AL88	458 aa	Predicted RBP	32.1	■■■□□ 2.73
SGMS2-209	ENST00000515332	ANXA1	P04083	346 aa		32.1	■■■□□ 2.73
SGMS2-209	ENST00000515332	RGMB	Q6NW40	437 aa		32.1	■■■□□ 2.73
SGMS2-209	ENST00000515332	SAMD7	Q7Z3H4	446 aa		32.1	■■■□□ 2.73
SGMS2-209	ENST00000515332	EIF2S2	P20042	333 aa	Known RBP	32.09	■■■□□ 2.73
SGMS2-209	ENST00000515332	SOX10	P56693	466 aa		32.09	■■■□□ 2.73
SGMS2-209	ENST00000515332	GRAP	Q13588	217 aa		32.09	■■■□□ 2.73
SGMS2-209	ENST00000515332	PROSER3	Q2NL68	480 aa		32.09	■■■□□ 2.73
SGMS2-209	ENST00000515332	GRAPL	Q8TC17	118 aa	Predicted RBP	32.09	■■■□□ 2.73
SGMS2-209	ENST00000515332	ANKRD36C	Q5JPF3	1778 aa		32.09	■■■□□ 2.73
SGMS2-209	ENST00000515332	DUOX1	Q9NRD9	1551 aa		32.08	■■■□□ 2.73
SGMS2-209	ENST00000515332	NFE2L2	Q16236	605 aa		32.08	■■■□□ 2.73
SGMS2-209	ENST00000515332	KIF23	Q02241	960 aa	Predicted RBP	32.07	■■■□□ 2.72
SGMS2-209	ENST00000515332	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	32.07	■■■□□ 2.72
SGMS2-209	ENST00000515332	KRT26	Q7Z3Y9	468 aa		32.07	■■■□□ 2.72
SGMS2-209	ENST00000515332	NLRP10	Q86W26	655 aa		32.07	■■■□□ 2.72
SGMS2-209	ENST00000515332	GBA2	Q9HCG7	927 aa	Predicted RBP	32.07	■■■□□ 2.72
SGMS2-209	ENST00000515332	PDE4DIP	Q5VU43	2346 aa		32.07	■■■□□ 2.72
SGMS2-209	ENST00000515332	TAF1	P21675	1872 aa		32.06	■■■□□ 2.72
SGMS2-209	ENST00000515332	PSMD14	O00487	310 aa		32.06	■■■□□ 2.72
SGMS2-209	ENST00000515332	EGFR	P00533	1210 aa		32.06	■■■□□ 2.72
SGMS2-209	ENST00000515332	PLEKHF1	Q96S99	279 aa		32.06	■■■□□ 2.72
SGMS2-209	ENST00000515332	SAGE1	Q9NXZ1	904 aa		32.06	■■■□□ 2.72
SGMS2-209	ENST00000515332	ADM5	C9JUS6	153 aa		32.05	■■■□□ 2.72
SGMS2-209	ENST00000515332	C2orf69	Q8N8R5	385 aa		32.05	■■■□□ 2.72
SGMS2-209	ENST00000515332	DPF2	Q92785	391 aa		32.05	■■■□□ 2.72
SGMS2-209	ENST00000515332	TSPYL4	Q9UJ04	414 aa		32.05	■■■□□ 2.72
SGMS2-209	ENST00000515332	DBNDD1	Q9H9R9	158 aa		32.04	■■■□□ 2.72
SGMS2-209	ENST00000515332	TRMT112	Q9UI30	125 aa	Known RBP	32.04	■■■□□ 2.72
SGMS2-209	ENST00000515332	TRPA1	O75762	1119 aa		32.03	■■■□□ 2.72
SGMS2-209	ENST00000515332	ZNF157	P51786	506 aa	Predicted RBP	32.03	■■■□□ 2.72
SGMS2-209	ENST00000515332	RBM26	Q5T8P6	1007 aa	Known RBP	32.03	■■■□□ 2.72
SGMS2-209	ENST00000515332	CCDC102A	Q96A19	550 aa		32.03	■■■□□ 2.72
SGMS2-209	ENST00000515332	RNF186	Q9NXI6	227 aa		32.03	■■■□□ 2.72
SGMS2-209	ENST00000515332	AIMP1	Q12904	312 aa	Known RBP	32.02	■■■□□ 2.72
SGMS2-209	ENST00000515332	HSP90AB3P	Q58FF7	597 aa		32.02	■■■□□ 2.72
SGMS2-209	ENST00000515332	ZNF428	Q96B54	188 aa		32.02	■■■□□ 2.72
SGMS2-209	ENST00000515332	SH3TC1	Q8TE82	1336 aa		32.01	■■■□□ 2.72
SGMS2-209	ENST00000515332	WASHC4	Q2M389	1173 aa		32.01	■■■□□ 2.71
SGMS2-209	ENST00000515332	COPS6	Q7L5N1	327 aa		32.01	■■■□□ 2.71
SGMS2-209	ENST00000515332	DCPS	Q96C86	337 aa	Known RBP	32.01	■■■□□ 2.71
SGMS2-209	ENST00000515332	POLR2A	P24928	1970 aa	Known RBP	32.01	■■■□□ 2.71
SGMS2-209	ENST00000515332	RIMBP2	O15034	1052 aa		32	■■■□□ 2.71
SGMS2-209	ENST00000515332	TMC4	Q7Z404	712 aa		32	■■■□□ 2.71
SGMS2-209	ENST00000515332	XAGE3	Q8WTP9	111 aa		32	■■■□□ 2.71
SGMS2-209	ENST00000515332	NECTIN2	Q92692	538 aa		32	■■■□□ 2.71
SGMS2-209	ENST00000515332	LRRC37A	A6NMS7	1700 aa		32	■■■□□ 2.71
SGMS2-209	ENST00000515332	TCIRG1	Q13488	830 aa		31.99	■■■□□ 2.71
SGMS2-209	ENST00000515332	KCNQ5	Q9NR82	932 aa		31.98	■■■□□ 2.71
SGMS2-209	ENST00000515332	NSFL1C	Q9UNZ2	370 aa	Known RBP	31.98	■■■□□ 2.71
SGMS2-209	ENST00000515332	SLC10A3	P09131	477 aa		31.96	■■■□□ 2.71
SGMS2-209	ENST00000515332	CSRNP1	Q96S65	589 aa		31.96	■■■□□ 2.71
SGMS2-209	ENST00000515332	MAPK8IP3	Q9UPT6	1336 aa		31.96	■■■□□ 2.71
SGMS2-209	ENST00000515332	C6orf229	H3BNL8	230 aa		31.95	■■■□□ 2.71
SGMS2-209	ENST00000515332	RPS12	P25398	132 aa	Known RBP	31.95	■■■□□ 2.71
SGMS2-209	ENST00000515332	DOK7	Q18PE1	504 aa		31.95	■■■□□ 2.71
SGMS2-209	ENST00000515332	CELF1	Q92879	486 aa	Known RBP	31.95	■■■□□ 2.71
SGMS2-209	ENST00000515332	POLL	Q9UGP5	575 aa		31.95	■■■□□ 2.71
SGMS2-209	ENST00000515332	RTL9	Q8NET4	1388 aa		31.94	■■■□□ 2.7
SGMS2-209	ENST00000515332	AKAP11	Q9UKA4	1901 aa		31.94	■■■□□ 2.7
SGMS2-209	ENST00000515332	ECE2	O60344	883 aa		31.94	■■■□□ 2.7
SGMS2-209	ENST00000515332	GPSM2	P81274	684 aa		31.93	■■■□□ 2.7
SGMS2-209	ENST00000515332	KIF4B	Q2VIQ3	1234 aa		31.93	■■■□□ 2.7
SGMS2-209	ENST00000515332	CTU1	Q7Z7A3	348 aa	Known RBP	31.93	■■■□□ 2.7
SGMS2-209	ENST00000515332	GGA3	Q9NZ52	723 aa		31.92	■■■□□ 2.7
SGMS2-209	ENST00000515332	ASTN2	O75129	1339 aa	Predicted RBP	31.92	■■■□□ 2.7
SGMS2-209	ENST00000515332	SULF1	Q8IWU6	871 aa		31.91	■■■□□ 2.7
SGMS2-209	ENST00000515332	DDX60	Q8IY21	1712 aa	Known RBP	31.91	■■■□□ 2.7
SGMS2-209	ENST00000515332	COL4A1	P02462	1669 aa		31.9	■■■□□ 2.7
SGMS2-209	ENST00000515332	PRPF38B	Q5VTL8	546 aa	Known RBP	31.9	■■■□□ 2.7
SGMS2-209	ENST00000515332	CDCA5	Q96FF9	252 aa		31.9	■■■□□ 2.7
SGMS2-209	ENST00000515332	PNN	Q9H307	717 aa	Known RBP	31.89	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms