RNA–Protein interactions for RNA: ENST00000515090.5

GPM6A-221, Transcript of glycoprotein M6A, human

TSL 2 BASIC

Gene GPM6A, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPM6A-221	ENST00000515090	PCNT	O95613	3336 aa		10.53	□□□□□ -0.72
GPM6A-221	ENST00000515090	MYL6B	P14649	208 aa		10.53	□□□□□ -0.72
GPM6A-221	ENST00000515090	PDIA6	Q15084	440 aa		10.53	□□□□□ -0.72
GPM6A-221	ENST00000515090	PROSER3	Q2NL68	480 aa		10.53	□□□□□ -0.72
GPM6A-221	ENST00000515090	LRP10	Q7Z4F1	713 aa		10.53	□□□□□ -0.72
GPM6A-221	ENST00000515090	CNBD1	Q8NA66	436 aa		10.53	□□□□□ -0.72
GPM6A-221	ENST00000515090	RRAGC	Q9HB90	399 aa		10.53	□□□□□ -0.72
GPM6A-221	ENST00000515090	ADAMTS8	Q9UP79	889 aa		10.53	□□□□□ -0.72
GPM6A-221	ENST00000515090	NUP98	P52948	1817 aa		10.53	□□□□□ -0.72
GPM6A-221	ENST00000515090	SRGN	P10124	158 aa		10.52	□□□□□ -0.73
GPM6A-221	ENST00000515090	HTRA3	P83110	453 aa		10.52	□□□□□ -0.73
GPM6A-221	ENST00000515090	FER1L6	Q2WGJ9	1857 aa		10.52	□□□□□ -0.73
GPM6A-221	ENST00000515090	NECTIN2	Q92692	538 aa		10.52	□□□□□ -0.73
GPM6A-221	ENST00000515090	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.52	□□□□□ -0.73
GPM6A-221	ENST00000515090	LAMB4	A4D0S4	1761 aa		10.52	□□□□□ -0.73
GPM6A-221	ENST00000515090	ARHGAP33	O14559	1287 aa		10.51	□□□□□ -0.73
GPM6A-221	ENST00000515090	WDR43	Q15061	677 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
GPM6A-221	ENST00000515090	ADGRD1	Q6QNK2	874 aa		10.51	□□□□□ -0.73
GPM6A-221	ENST00000515090	CLEC4G	Q6UXB4	293 aa		10.51	□□□□□ -0.73
GPM6A-221	ENST00000515090	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.51	□□□□□ -0.73
GPM6A-221	ENST00000515090	NUTM1	Q86Y26	1132 aa		10.51	□□□□□ -0.73
GPM6A-221	ENST00000515090	C7orf43	Q8WVR3	580 aa		10.51	□□□□□ -0.73
GPM6A-221	ENST00000515090	ZNF428	Q96B54	188 aa		10.51	□□□□□ -0.73
GPM6A-221	ENST00000515090	MAPK8IP3	Q9UPT6	1336 aa		10.51	□□□□□ -0.73
GPM6A-221	ENST00000515090	POTEC	B2RU33	542 aa		10.5	□□□□□ -0.73
GPM6A-221	ENST00000515090	HSPA6	P17066	643 aa		10.5	□□□□□ -0.73
GPM6A-221	ENST00000515090	EIF2S2	P20042	333 aa	Known RBP	10.5	□□□□□ -0.73
GPM6A-221	ENST00000515090	GPT	P24298	496 aa		10.5	□□□□□ -0.73
GPM6A-221	ENST00000515090	PDE6B	P35913	854 aa		10.5	□□□□□ -0.73
GPM6A-221	ENST00000515090	ZBTB3	Q9H5J0	574 aa		10.5	□□□□□ -0.73
GPM6A-221	ENST00000515090	TSPYL4	Q9UJ04	414 aa		10.5	□□□□□ -0.73
GPM6A-221	ENST00000515090	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.5	□□□□□ -0.73
GPM6A-221	ENST00000515090	UBN2	Q6ZU65	1347 aa		10.5	□□□□□ -0.73
GPM6A-221	ENST00000515090	KLRG2	A4D1S0	409 aa	Predicted RBP	10.49	□□□□□ -0.73
GPM6A-221	ENST00000515090	ECM2	O94769	699 aa	Predicted RBP	10.49	□□□□□ -0.73
GPM6A-221	ENST00000515090	NEFM	P07197	916 aa		10.49	□□□□□ -0.73
GPM6A-221	ENST00000515090	LMNB1	P20700	586 aa		10.49	□□□□□ -0.73
GPM6A-221	ENST00000515090	PRPF40B	Q6NWY9	871 aa	Known RBP	10.49	□□□□□ -0.73
GPM6A-221	ENST00000515090	NPM2	Q86SE8	214 aa	Known RBP	10.49	□□□□□ -0.73
GPM6A-221	ENST00000515090	PPP4R2	Q9NY27	417 aa		10.49	□□□□□ -0.73
GPM6A-221	ENST00000515090	ABCC12	Q96J65	1359 aa		10.49	□□□□□ -0.73
GPM6A-221	ENST00000515090	TOMM70	O94826	608 aa		10.48	□□□□□ -0.73
GPM6A-221	ENST00000515090	ST5	P78524	1137 aa		10.48	□□□□□ -0.73
GPM6A-221	ENST00000515090	ERFE	Q4G0M1	354 aa		10.48	□□□□□ -0.73
GPM6A-221	ENST00000515090	SUSD4	Q5VX71	490 aa		10.48	□□□□□ -0.73
GPM6A-221	ENST00000515090	SYNE4	Q8N205	404 aa		10.48	□□□□□ -0.73
GPM6A-221	ENST00000515090	MASTL	Q96GX5	879 aa		10.48	□□□□□ -0.73
GPM6A-221	ENST00000515090	MAP3K15	Q6ZN16	1313 aa		10.48	□□□□□ -0.73
GPM6A-221	ENST00000515090	DICER1	Q9UPY3	1922 aa	Known RBP	10.48	□□□□□ -0.73
GPM6A-221	ENST00000515090	NPHP1	O15259	732 aa		10.48	□□□□□ -0.73
GPM6A-221	ENST00000515090	STYK1	Q6J9G0	422 aa		10.48	□□□□□ -0.73
GPM6A-221	ENST00000515090	LAS1L	Q9Y4W2	734 aa	Known RBP	10.48	□□□□□ -0.73
GPM6A-221	ENST00000515090	ZNF521	Q96K83	1311 aa		10.47	□□□□□ -0.73
GPM6A-221	ENST00000515090	TIAM2	Q8IVF5	1701 aa		10.47	□□□□□ -0.73
GPM6A-221	ENST00000515090	ARFGEF2	Q9Y6D5	1785 aa		10.47	□□□□□ -0.73
GPM6A-221	ENST00000515090	GLTPD2	A6NH11	291 aa		10.47	□□□□□ -0.73
GPM6A-221	ENST00000515090	ERVV-1	B6SEH8	477 aa		10.47	□□□□□ -0.73
GPM6A-221	ENST00000515090	CHL1	O00533	1208 aa		10.47	□□□□□ -0.73
GPM6A-221	ENST00000515090	TPTE2	Q6XPS3	522 aa		10.47	□□□□□ -0.73
GPM6A-221	ENST00000515090	ZNF34	Q8IZ26	560 aa		10.47	□□□□□ -0.73
GPM6A-221	ENST00000515090	DNAJC5G	Q8N7S2	189 aa		10.47	□□□□□ -0.73
GPM6A-221	ENST00000515090	RUNDC1	Q96C34	613 aa		10.47	□□□□□ -0.73
GPM6A-221	ENST00000515090	PNN	Q9H307	717 aa	Known RBP	10.47	□□□□□ -0.73
GPM6A-221	ENST00000515090	ZNF652	Q9Y2D9	606 aa		10.47	□□□□□ -0.73
GPM6A-221	ENST00000515090	CNKSR1	Q969H4	720 aa		10.46	□□□□□ -0.74
GPM6A-221	ENST00000515090	APAF1	O14727	1248 aa		10.45	□□□□□ -0.74
GPM6A-221	ENST00000515090	DDN	O94850	711 aa	Predicted RBP	10.45	□□□□□ -0.74
GPM6A-221	ENST00000515090	NTSR2	O95665	410 aa		10.45	□□□□□ -0.74
GPM6A-221	ENST00000515090	NPR1	P16066	1061 aa		10.45	□□□□□ -0.74
GPM6A-221	ENST00000515090	AIMP1	Q12904	312 aa	Known RBP	10.45	□□□□□ -0.74
GPM6A-221	ENST00000515090	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.45	□□□□□ -0.74
GPM6A-221	ENST00000515090	COPS6	Q7L5N1	327 aa		10.45	□□□□□ -0.74
GPM6A-221	ENST00000515090	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.45	□□□□□ -0.74
GPM6A-221	ENST00000515090	TAF1	P21675	1872 aa		10.45	□□□□□ -0.74
GPM6A-221	ENST00000515090	KDM2B	Q8NHM5	1336 aa		10.44	□□□□□ -0.74
GPM6A-221	ENST00000515090	TK2	O00142	265 aa		10.44	□□□□□ -0.74
GPM6A-221	ENST00000515090	TCERG1	O14776	1098 aa	Known RBP	10.44	□□□□□ -0.74
GPM6A-221	ENST00000515090	RBM46	Q8TBY0	533 aa	Known RBP	10.44	□□□□□ -0.74
GPM6A-221	ENST00000515090	XAGE3	Q8WTP9	111 aa		10.44	□□□□□ -0.74
GPM6A-221	ENST00000515090	PDZRN3	Q9UPQ7	1066 aa		10.44	□□□□□ -0.74
GPM6A-221	ENST00000515090	COL4A5	P29400	1685 aa		10.44	□□□□□ -0.74
GPM6A-221	ENST00000515090	SNED1	Q8TER0	1413 aa		10.44	□□□□□ -0.74
GPM6A-221	ENST00000515090	GTF2E1	P29083	439 aa	Predicted RBP	10.43	□□□□□ -0.74
GPM6A-221	ENST00000515090	CCDC27	Q2M243	656 aa		10.43	□□□□□ -0.74
GPM6A-221	ENST00000515090	CRY2	Q49AN0	593 aa		10.43	□□□□□ -0.74
GPM6A-221	ENST00000515090	KIF6	Q6ZMV9	814 aa		10.43	□□□□□ -0.74
GPM6A-221	ENST00000515090	TAOK3	Q9H2K8	898 aa		10.43	□□□□□ -0.74
GPM6A-221	ENST00000515090	CHPF2	Q9P2E5	772 aa		10.43	□□□□□ -0.74
GPM6A-221	ENST00000515090	LTBP3	Q9NS15	1303 aa		10.43	□□□□□ -0.74
GPM6A-221	ENST00000515090	RGL2	O15211	777 aa		10.43	□□□□□ -0.74
GPM6A-221	ENST00000515090	TRMT2A	Q8IZ69	625 aa	Known RBP	10.43	□□□□□ -0.74
GPM6A-221	ENST00000515090	MBIP	Q9NS73	344 aa		10.43	□□□□□ -0.74
GPM6A-221	ENST00000515090	ZNF541	Q9H0D2	1346 aa		10.42	□□□□□ -0.74
GPM6A-221	ENST00000515090	ELL2	O00472	640 aa	Predicted RBP	10.42	□□□□□ -0.74
GPM6A-221	ENST00000515090	ZNF853	P0CG23	659 aa		10.42	□□□□□ -0.74
GPM6A-221	ENST00000515090	HCLS1	P14317	486 aa	Predicted RBP	10.42	□□□□□ -0.74
GPM6A-221	ENST00000515090	VEGFA	P15692	232 aa	Predicted RBP	10.42	□□□□□ -0.74
GPM6A-221	ENST00000515090	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.42	□□□□□ -0.74
GPM6A-221	ENST00000515090	PTCD2	Q8WV60	388 aa	Known RBP	10.42	□□□□□ -0.74
GPM6A-221	ENST00000515090	BABAM1	Q9NWV8	329 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms