RNA–Protein interactions for RNA: ENST00000514384.1

SMIM20-202, Transcript of small integral membrane protein 20, humanhuman

TSL 5 BASIC

Gene SMIM20, Length 774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-202ENST00000514384 NBPF4Q96M43 638 aa9.2□□□□□ -0.94
SMIM20-202ENST00000514384 PRDM6Q9NQX0 595 aa9.2□□□□□ -0.94
SMIM20-202ENST00000514384 ATG3Q9NT62 314 aa9.2□□□□□ -0.94
SMIM20-202ENST00000514384 DICER1Q9UPY3 1922 aaKnown RBP9.2□□□□□ -0.94
SMIM20-202ENST00000514384 PCDH11XQ9BZA7 1347 aa9.2□□□□□ -0.94
SMIM20-202ENST00000514384 PCDH11YQ9BZA8 1340 aa9.2□□□□□ -0.94
SMIM20-202ENST00000514384 USP42Q9H9J4 1324 aaKnown RBP9.2□□□□□ -0.94
SMIM20-202ENST00000514384 USP31Q70CQ4 1352 aa9.2□□□□□ -0.94
SMIM20-202ENST00000514384 E9PSI1 815 aa9.19□□□□□ -0.94
SMIM20-202ENST00000514384 TATP17735 454 aaPredicted RBP9.19□□□□□ -0.94
SMIM20-202ENST00000514384 FBLN1P23142 703 aa9.19□□□□□ -0.94
SMIM20-202ENST00000514384 NOGQ13253 232 aa9.19□□□□□ -0.94
SMIM20-202ENST00000514384 C8orf34Q49A92 452 aa9.19□□□□□ -0.94
SMIM20-202ENST00000514384 RAPGEF4Q8WZA2 1011 aa9.19□□□□□ -0.94
SMIM20-202ENST00000514384 RBM27Q9P2N5 1060 aaKnown RBP9.19□□□□□ -0.94
SMIM20-202ENST00000514384 HCSTQ9UBK5 93 aa9.19□□□□□ -0.94
SMIM20-202ENST00000514384 RGPD2P0DJD1 1756 aa9.19□□□□□ -0.94
SMIM20-202ENST00000514384 ITGB4P16144 1822 aa9.19□□□□□ -0.94
SMIM20-202ENST00000514384 KIF23Q02241 960 aaPredicted RBP9.18□□□□□ -0.94
SMIM20-202ENST00000514384 CGNL1Q0VF96 1302 aa9.18□□□□□ -0.94
SMIM20-202ENST00000514384 ADGRD1Q6QNK2 874 aa9.18□□□□□ -0.94
SMIM20-202ENST00000514384 NPM2Q86SE8 214 aaKnown RBP9.18□□□□□ -0.94
SMIM20-202ENST00000514384 CCDC24Q8N4L8 307 aa9.18□□□□□ -0.94
SMIM20-202ENST00000514384 LTBP3Q9NS15 1303 aa9.18□□□□□ -0.94
SMIM20-202ENST00000514384 SAGE1Q9NXZ1 904 aa9.18□□□□□ -0.94
SMIM20-202ENST00000514384 TMOD3Q9NYL9 352 aa9.18□□□□□ -0.94
SMIM20-202ENST00000514384 HDAC9Q9UKV0 1011 aa9.18□□□□□ -0.94
SMIM20-202ENST00000514384 MAPK8IP3Q9UPT6 1336 aa9.18□□□□□ -0.94
SMIM20-202ENST00000514384 CD163L1Q9NR16 1453 aa9.17□□□□□ -0.94
SMIM20-202ENST00000514384 CNTNAP4Q9C0A0 1308 aa9.17□□□□□ -0.94
SMIM20-202ENST00000514384 TK2O00142 265 aa9.17□□□□□ -0.94
SMIM20-202ENST00000514384 PLIN1O60240 522 aa9.17□□□□□ -0.94
SMIM20-202ENST00000514384 CNGB1Q14028 1251 aaPredicted RBP9.17□□□□□ -0.94
SMIM20-202ENST00000514384 NFIXQ14938 502 aa9.17□□□□□ -0.94
SMIM20-202ENST00000514384 NFKBIBQ15653 356 aa9.17□□□□□ -0.94
SMIM20-202ENST00000514384 PPP1R15BQ5SWA1 713 aa9.17□□□□□ -0.94
SMIM20-202ENST00000514384 RC3H1Q5TC82 1133 aaKnown RBP9.17□□□□□ -0.94
SMIM20-202ENST00000514384 USPL1Q5W0Q7 1092 aa9.17□□□□□ -0.94
SMIM20-202ENST00000514384 GLIS2Q9BZE0 524 aaPredicted RBP9.17□□□□□ -0.94
SMIM20-202ENST00000514384 ZNF277Q9NRM2 450 aaPredicted RBP9.17□□□□□ -0.94
SMIM20-202ENST00000514384 FER1L6Q2WGJ9 1857 aa9.17□□□□□ -0.94
SMIM20-202ENST00000514384 KDRP35968 1356 aa9.16□□□□□ -0.94
SMIM20-202ENST00000514384 SERPINB2P05120 415 aa9.16□□□□□ -0.94
SMIM20-202ENST00000514384 EN2P19622 333 aaPredicted RBP9.16□□□□□ -0.94
SMIM20-202ENST00000514384 HOXC9P31274 260 aa9.16□□□□□ -0.94
SMIM20-202ENST00000514384 EPS15P42566 896 aa9.16□□□□□ -0.94
SMIM20-202ENST00000514384 C20orf194Q5TEA3 1177 aa9.16□□□□□ -0.94
SMIM20-202ENST00000514384 HHIPL1Q96JK4 782 aa9.16□□□□□ -0.94
SMIM20-202ENST00000514384 GJA3Q9Y6H8 435 aa9.16□□□□□ -0.94
SMIM20-202ENST00000514384 DLEC1Q9Y238 1755 aa9.16□□□□□ -0.94
SMIM20-202ENST00000514384 SCN11AQ9UI33 1791 aa9.15□□□□□ -0.94
SMIM20-202ENST00000514384 CENPJQ9HC77 1338 aaPredicted RBP9.15□□□□□ -0.94
SMIM20-202ENST00000514384 FAM155AB1AL88 458 aaPredicted RBP9.15□□□□□ -0.94
SMIM20-202ENST00000514384 SOX1O00570 391 aaPredicted RBP9.15□□□□□ -0.94
SMIM20-202ENST00000514384 PKN2Q16513 984 aaKnown RBP9.15□□□□□ -0.94
SMIM20-202ENST00000514384 DLK2Q6UY11 383 aa9.15□□□□□ -0.94
SMIM20-202ENST00000514384 LRCH3Q96II8 777 aa9.15□□□□□ -0.94
SMIM20-202ENST00000514384 PUS7Q96PZ0 661 aaKnown RBP9.15□□□□□ -0.94
SMIM20-202ENST00000514384 LAS1LQ9Y4W2 734 aaKnown RBP9.15□□□□□ -0.94
SMIM20-202ENST00000514384 UNC80Q8N2C7 3258 aa9.14□□□□□ -0.95
SMIM20-202ENST00000514384 AMPHP49418 695 aa9.14□□□□□ -0.95
SMIM20-202ENST00000514384 HUNKP57058 714 aa9.14□□□□□ -0.95
SMIM20-202ENST00000514384 FBXO46Q6PJ61 603 aaPredicted RBP9.14□□□□□ -0.95
SMIM20-202ENST00000514384 ZNF454Q8N9F8 522 aa9.14□□□□□ -0.95
SMIM20-202ENST00000514384 ZNF296Q8WUU4 475 aaPredicted RBP9.14□□□□□ -0.95
SMIM20-202ENST00000514384 KCNK17Q96T54 332 aa9.14□□□□□ -0.95
SMIM20-202ENST00000514384 SALL2Q9Y467 1007 aaPredicted RBP9.14□□□□□ -0.95
SMIM20-202ENST00000514384 BRCA2P51587 3418 aa9.14□□□□□ -0.95
SMIM20-202ENST00000514384 TRPM7Q96QT4 1865 aa9.13□□□□□ -0.95
SMIM20-202ENST00000514384 MAP3K19Q56UN5 1328 aa9.13□□□□□ -0.95
SMIM20-202ENST00000514384 LMOD1P29536 600 aaPredicted RBP9.13□□□□□ -0.95
SMIM20-202ENST00000514384 OLFM4Q6UX06 510 aa9.13□□□□□ -0.95
SMIM20-202ENST00000514384 VCANP13611 3396 aa9.13□□□□□ -0.95
SMIM20-202ENST00000514384 GOLGA8CPA6NN73 597 aa9.12□□□□□ -0.95
SMIM20-202ENST00000514384 ZPR1O75312 459 aa9.12□□□□□ -0.95
SMIM20-202ENST00000514384 PLA2G5P39877 138 aa9.12□□□□□ -0.95
SMIM20-202ENST00000514384 CRKLP46109 303 aaKnown RBP9.12□□□□□ -0.95
SMIM20-202ENST00000514384 SCNN1DP51172 638 aa9.12□□□□□ -0.95
SMIM20-202ENST00000514384 MAP3K9P80192 1104 aa9.12□□□□□ -0.95
SMIM20-202ENST00000514384 NKX1-1Q15270 411 aaPredicted RBP9.12□□□□□ -0.95
SMIM20-202ENST00000514384 CCDC27Q2M243 656 aa9.12□□□□□ -0.95
SMIM20-202ENST00000514384 GPC2Q8N158 579 aa9.12□□□□□ -0.95
SMIM20-202ENST00000514384 DDX27Q96GQ7 796 aaKnown RBP9.12□□□□□ -0.95
SMIM20-202ENST00000514384 CSRNP1Q96S65 589 aa9.12□□□□□ -0.95
SMIM20-202ENST00000514384 AFDNP55196 1824 aaKnown RBP9.12□□□□□ -0.95
SMIM20-202ENST00000514384 FZD9O00144 591 aa9.11□□□□□ -0.95
SMIM20-202ENST00000514384 TBC1D8O95759 1140 aa9.11□□□□□ -0.95
SMIM20-202ENST00000514384 PSEN2P49810 448 aa9.11□□□□□ -0.95
SMIM20-202ENST00000514384 RGMBQ6NW40 437 aa9.11□□□□□ -0.95
SMIM20-202ENST00000514384 PRPF40BQ6NWY9 871 aaKnown RBP9.11□□□□□ -0.95
SMIM20-202ENST00000514384 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMIM20-202ENST00000514384 OXER1Q8TDS5 423 aa9.11□□□□□ -0.95
SMIM20-202ENST00000514384 LARP6Q9BRS8 491 aaKnown RBP9.11□□□□□ -0.95
SMIM20-202ENST00000514384 CRISPLD2Q9H0B8 497 aa9.11□□□□□ -0.95
SMIM20-202ENST00000514384 MYH14Q7Z406 1995 aaKnown RBP9.11□□□□□ -0.95
SMIM20-202ENST00000514384 RANBP2P49792 3224 aaKnown RBP9.1□□□□□ -0.95
SMIM20-202ENST00000514384 CT47B1P0C2W7 299 aaPredicted RBP9.1□□□□□ -0.95
SMIM20-202ENST00000514384 PTPREP23469 700 aa9.1□□□□□ -0.95
SMIM20-202ENST00000514384 BECN1Q14457 450 aa9.1□□□□□ -0.95
SMIM20-202ENST00000514384 WDR63Q8IWG1 891 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms