RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 PRR12Q9ULL5 1215 aa7.34□□□□□ -1.23
CLDND1-228ENST00000513873 IFT140Q96RY7 1462 aa7.33□□□□□ -1.24
CLDND1-228ENST00000513873 RSPO4Q2I0M5 234 aaPredicted RBP7.33□□□□□ -1.24
CLDND1-228ENST00000513873 FOXD4L6Q3SYB3 417 aaPredicted RBP7.33□□□□□ -1.24
CLDND1-228ENST00000513873 COX20Q5RI15 118 aa7.33□□□□□ -1.24
CLDND1-228ENST00000513873 IER5Q5VY09 327 aa7.33□□□□□ -1.24
CLDND1-228ENST00000513873 FOXD4L3Q6VB84 417 aaPredicted RBP7.33□□□□□ -1.24
CLDND1-228ENST00000513873 BTLAQ7Z6A9 289 aa7.33□□□□□ -1.24
CLDND1-228ENST00000513873 BTBD6Q96KE9 485 aa7.33□□□□□ -1.24
CLDND1-228ENST00000513873 BRD7Q9NPI1 651 aa7.33□□□□□ -1.24
CLDND1-228ENST00000513873 FAM13BQ9NYF5 915 aa7.33□□□□□ -1.24
CLDND1-228ENST00000513873 SLAIN2Q9P270 581 aa7.33□□□□□ -1.24
CLDND1-228ENST00000513873 GGA1Q9UJY5 639 aa7.33□□□□□ -1.24
CLDND1-228ENST00000513873 ZNF608Q9ULD9 1512 aaPredicted RBP7.32□□□□□ -1.24
CLDND1-228ENST00000513873 MICAL2O94851 1124 aa7.32□□□□□ -1.24
CLDND1-228ENST00000513873 ABL1P00519 1130 aa7.32□□□□□ -1.24
CLDND1-228ENST00000513873 THBS1P07996 1170 aa7.32□□□□□ -1.24
CLDND1-228ENST00000513873 PDIA4P13667 645 aaKnown RBP7.32□□□□□ -1.24
CLDND1-228ENST00000513873 ABTB2Q8N961 1025 aa7.32□□□□□ -1.24
CLDND1-228ENST00000513873 SEPT3Q9UH03 358 aa7.32□□□□□ -1.24
CLDND1-228ENST00000513873 KCNH4Q9UQ05 1017 aa7.32□□□□□ -1.24
CLDND1-228ENST00000513873 SPATA31C1P0DKV0 1188 aa7.31□□□□□ -1.24
CLDND1-228ENST00000513873 YBX3P16989 372 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLDND1-228ENST00000513873 CD33P20138 364 aa7.31□□□□□ -1.24
CLDND1-228ENST00000513873 DGKGP49619 791 aa7.31□□□□□ -1.24
CLDND1-228ENST00000513873 ARSDP51689 593 aa7.31□□□□□ -1.24
CLDND1-228ENST00000513873 LRP8Q14114 963 aa7.31□□□□□ -1.24
CLDND1-228ENST00000513873 UBAP2LQ14157 1087 aaKnown RBP7.31□□□□□ -1.24
CLDND1-228ENST00000513873 CAPN12Q6ZSI9 719 aa7.31□□□□□ -1.24
CLDND1-228ENST00000513873 CCER1Q8TC90 406 aaPredicted RBP7.31□□□□□ -1.24
CLDND1-228ENST00000513873 GTF3C2Q8WUA4 911 aaPredicted RBP7.31□□□□□ -1.24
CLDND1-228ENST00000513873 SAP130Q9H0E3 1048 aa7.31□□□□□ -1.24
CLDND1-228ENST00000513873 NDFIP2Q9NV92 336 aa7.31□□□□□ -1.24
CLDND1-228ENST00000513873 STIM2Q9P246 746 aa7.31□□□□□ -1.24
CLDND1-228ENST00000513873 BRD1O95696 1058 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 HOXB4P17483 251 aaPredicted RBP7.3□□□□□ -1.24
CLDND1-228ENST00000513873 TXKP42681 527 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 IDH3AP50213 366 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 CTBSQ01459 385 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 AAMPQ13685 434 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 NKAPLQ5M9Q1 402 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 FAM182BQ5T319 152 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 TREML1Q86YW5 311 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 TTC16Q8NEE8 873 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 HELQQ8TDG4 1101 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 PNMA5Q96PV4 448 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 LRFN2Q9ULH4 789 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 CFTRP13569 1480 aa7.3□□□□□ -1.24
CLDND1-228ENST00000513873 SPDYE3A6NKU9 549 aa7.29□□□□□ -1.24
CLDND1-228ENST00000513873 EFSO43281 561 aa7.29□□□□□ -1.24
CLDND1-228ENST00000513873 PAX4O43316 350 aa7.29□□□□□ -1.24
CLDND1-228ENST00000513873 DYRK3O43781 588 aa7.29□□□□□ -1.24
CLDND1-228ENST00000513873 EPXP11678 715 aa7.29□□□□□ -1.24
CLDND1-228ENST00000513873 TYRO3Q06418 890 aa7.29□□□□□ -1.24
CLDND1-228ENST00000513873 PATL2C9JE40 543 aaKnown RBP7.28□□□□□ -1.24
CLDND1-228ENST00000513873 APBA3O96018 575 aa7.28□□□□□ -1.24
CLDND1-228ENST00000513873 PCSK2P16519 638 aa7.28□□□□□ -1.24
CLDND1-228ENST00000513873 SFSWAPQ12872 951 aaKnown RBP7.28□□□□□ -1.24
CLDND1-228ENST00000513873 SF3B2Q13435 895 aaKnown RBP7.28□□□□□ -1.24
CLDND1-228ENST00000513873 PRSS36Q5K4E3 855 aa7.28□□□□□ -1.24
CLDND1-228ENST00000513873 ALKBH2Q6NS38 261 aa7.28□□□□□ -1.24
CLDND1-228ENST00000513873 PIK3R5Q8WYR1 880 aa7.28□□□□□ -1.24
CLDND1-228ENST00000513873 KRTAP4-7Q9BYR0 210 aa7.28□□□□□ -1.24
CLDND1-228ENST00000513873 EIF4G3O43432 1585 aaKnown RBP7.28□□□□□ -1.24
CLDND1-228ENST00000513873 MROH2BQ7Z745 1585 aa7.28□□□□□ -1.24
CLDND1-228ENST00000513873 FAM13AO94988 1023 aa7.27□□□□□ -1.25
CLDND1-228ENST00000513873 SCNN1AP37088 669 aa7.27□□□□□ -1.25
CLDND1-228ENST00000513873 KCNQ4P56696 695 aa7.27□□□□□ -1.25
CLDND1-228ENST00000513873 PHLDB3Q6NSJ2 640 aa7.27□□□□□ -1.25
CLDND1-228ENST00000513873 CMTR1Q8N1G2 835 aaKnown RBP7.27□□□□□ -1.25
CLDND1-228ENST00000513873 TRAIPQ9BWF2 469 aa7.27□□□□□ -1.25
CLDND1-228ENST00000513873 TPSG1Q9NRR2 321 aa7.27□□□□□ -1.25
CLDND1-228ENST00000513873 BCS1LQ9Y276 419 aa7.27□□□□□ -1.25
CLDND1-228ENST00000513873 ARAFP10398 606 aa7.26□□□□□ -1.25
CLDND1-228ENST00000513873 INPP5BP32019 993 aa7.26□□□□□ -1.25
CLDND1-228ENST00000513873 FKBP4Q02790 459 aaKnown RBP eCLIP7.26□□□□□ -1.25
CLDND1-228ENST00000513873 SPEM2Q0P670 501 aa7.26□□□□□ -1.25
CLDND1-228ENST00000513873 CCINQ13939 588 aa7.26□□□□□ -1.25
CLDND1-228ENST00000513873 NOM1Q5C9Z4 860 aaKnown RBP7.26□□□□□ -1.25
CLDND1-228ENST00000513873 PRRT3Q5FWE3 981 aa7.26□□□□□ -1.25
CLDND1-228ENST00000513873 RGL4Q8IZJ4 473 aa7.26□□□□□ -1.25
CLDND1-228ENST00000513873 EFCC1Q9HA90 598 aa7.26□□□□□ -1.25
CLDND1-228ENST00000513873 STRN4Q9NRL3 753 aa7.26□□□□□ -1.25
CLDND1-228ENST00000513873 FNDC3AQ9Y2H6 1198 aaKnown RBP7.26□□□□□ -1.25
CLDND1-228ENST00000513873 RTCBQ9Y3I0 505 aaKnown RBP7.26□□□□□ -1.25
CLDND1-228ENST00000513873 TNFRSF10BO14763 440 aa7.25□□□□□ -1.25
CLDND1-228ENST00000513873 RPLP1P05386 114 aaKnown RBP7.25□□□□□ -1.25
CLDND1-228ENST00000513873 ADH6P28332 368 aa7.25□□□□□ -1.25
CLDND1-228ENST00000513873 ZAP70P43403 619 aa7.25□□□□□ -1.25
CLDND1-228ENST00000513873 CHSY3Q70JA7 882 aa7.25□□□□□ -1.25
CLDND1-228ENST00000513873 GLYCTKQ8IVS8 523 aa7.25□□□□□ -1.25
CLDND1-228ENST00000513873 ETFBKMTQ8IXQ9 262 aa7.25□□□□□ -1.25
CLDND1-228ENST00000513873 PLVAPQ9BX97 442 aa7.25□□□□□ -1.25
CLDND1-228ENST00000513873 C11orf16Q9NQ32 467 aa7.25□□□□□ -1.25
CLDND1-228ENST00000513873 AVENQ9NQS1 362 aaPredicted RBP7.25□□□□□ -1.25
CLDND1-228ENST00000513873 EGFL7Q9UHF1 273 aa7.25□□□□□ -1.25
CLDND1-228ENST00000513873 DMGDHQ9UI17 866 aaKnown RBP7.25□□□□□ -1.25
CLDND1-228ENST00000513873 PRDM2Q13029 1718 aa7.24□□□□□ -1.25
CLDND1-228ENST00000513873 CLASP1Q7Z460 1538 aa7.24□□□□□ -1.25
CLDND1-228ENST00000513873 KCNA1Q09470 495 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms