RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 FAM155AB1AL88 458 aaPredicted RBP14.55□□□□□ -0.08
DDX41-216ENST00000513562 MYL6BP14649 208 aa14.55□□□□□ -0.08
DDX41-216ENST00000513562 SOX10P56693 466 aa14.55□□□□□ -0.08
DDX41-216ENST00000513562 EIF4A1P60842 406 aaKnown RBP14.55□□□□□ -0.08
DDX41-216ENST00000513562 USP48Q86UV5 1035 aa14.55□□□□□ -0.08
DDX41-216ENST00000513562 SP8Q8IXZ3 490 aa14.55□□□□□ -0.08
DDX41-216ENST00000513562 PNISRQ8TF01 805 aaKnown RBP14.55□□□□□ -0.08
DDX41-216ENST00000513562 CNOT7Q9UIV1 285 aaKnown RBP14.55□□□□□ -0.08
DDX41-216ENST00000513562 SHTN1A0MZ66 631 aa14.54□□□□□ -0.08
DDX41-216ENST00000513562 YDJCA8MPS7 323 aa14.54□□□□□ -0.08
DDX41-216ENST00000513562 BBOX1O75936 387 aa14.54□□□□□ -0.08
DDX41-216ENST00000513562 RGMBQ6NW40 437 aa14.54□□□□□ -0.08
DDX41-216ENST00000513562 MICALL2Q8IY33 904 aa14.54□□□□□ -0.08
DDX41-216ENST00000513562 MPNDQ8N594 471 aa14.54□□□□□ -0.08
DDX41-216ENST00000513562 ERBB4Q15303 1308 aa14.54□□□□□ -0.08
DDX41-216ENST00000513562 H7C1D1 291 aa14.53□□□□□ -0.08
DDX41-216ENST00000513562 PRPF38BQ5VTL8 546 aaKnown RBP14.53□□□□□ -0.08
DDX41-216ENST00000513562 DLK2Q6UY11 383 aa14.53□□□□□ -0.08
DDX41-216ENST00000513562 UTP14AQ9BVJ6 771 aaKnown RBP14.53□□□□□ -0.08
DDX41-216ENST00000513562 LRP10Q7Z4F1 713 aa14.52□□□□□ -0.09
DDX41-216ENST00000513562 DPF2Q92785 391 aa14.52□□□□□ -0.09
DDX41-216ENST00000513562 CCDC102AQ96A19 550 aa14.52□□□□□ -0.09
DDX41-216ENST00000513562 GBA2Q9HCG7 927 aaPredicted RBP14.52□□□□□ -0.09
DDX41-216ENST00000513562 NUP98P52948 1817 aa14.52□□□□□ -0.09
DDX41-216ENST00000513562 KDM3BQ7LBC6 1761 aa14.52□□□□□ -0.09
DDX41-216ENST00000513562 DUOX1Q9NRD9 1551 aa14.51□□□□□ -0.09
DDX41-216ENST00000513562 CASP8AP2Q9UKL3 1982 aa14.51□□□□□ -0.09
DDX41-216ENST00000513562 KIF23Q02241 960 aaPredicted RBP14.51□□□□□ -0.09
DDX41-216ENST00000513562 KRT26Q7Z3Y9 468 aa14.51□□□□□ -0.09
DDX41-216ENST00000513562 RNF186Q9NXI6 227 aa14.51□□□□□ -0.09
DDX41-216ENST00000513562 ZBTB12Q9Y330 459 aaPredicted RBP14.51□□□□□ -0.09
DDX41-216ENST00000513562 TRPA1O75762 1119 aa14.5□□□□□ -0.09
DDX41-216ENST00000513562 PPP2R1AP30153 589 aa14.5□□□□□ -0.09
DDX41-216ENST00000513562 GRAPQ13588 217 aa14.5□□□□□ -0.09
DDX41-216ENST00000513562 SAMD7Q7Z3H4 446 aa14.5□□□□□ -0.09
DDX41-216ENST00000513562 C2orf69Q8N8R5 385 aa14.5□□□□□ -0.09
DDX41-216ENST00000513562 GRAPLQ8TC17 118 aaPredicted RBP14.5□□□□□ -0.09
DDX41-216ENST00000513562 PSMD14O00487 310 aa14.49□□□□□ -0.09
DDX41-216ENST00000513562 EGFRP00533 1210 aa14.49□□□□□ -0.09
DDX41-216ENST00000513562 SLC10A3P09131 477 aa14.49□□□□□ -0.09
DDX41-216ENST00000513562 ZNF157P51786 506 aaPredicted RBP14.49□□□□□ -0.09
DDX41-216ENST00000513562 DDX46Q7L014 1031 aaKnown RBP14.49□□□□□ -0.09
DDX41-216ENST00000513562 TMC4Q7Z404 712 aa14.49□□□□□ -0.09
DDX41-216ENST00000513562 CTU1Q7Z7A3 348 aaKnown RBP14.49□□□□□ -0.09
DDX41-216ENST00000513562 ADM5C9JUS6 153 aa14.48□□□□□ -0.09
DDX41-216ENST00000513562 HCLS1P14317 486 aaPredicted RBP14.48□□□□□ -0.09
DDX41-216ENST00000513562 RPS12P25398 132 aaKnown RBP14.48□□□□□ -0.09
DDX41-216ENST00000513562 PDIA6Q15084 440 aa14.48□□□□□ -0.09
DDX41-216ENST00000513562 TBC1D10BQ4KMP7 808 aaPredicted RBP14.48□□□□□ -0.09
DDX41-216ENST00000513562 THUMPD2Q9BTF0 503 aaKnown RBP14.48□□□□□ -0.09
DDX41-216ENST00000513562 NLRP10Q86W26 655 aa14.47□□□□□ -0.09
DDX41-216ENST00000513562 DCPSQ96C86 337 aaKnown RBP14.47□□□□□ -0.09
DDX41-216ENST00000513562 CSRNP1Q96S65 589 aa14.47□□□□□ -0.09
DDX41-216ENST00000513562 WASHC4Q2M389 1173 aa14.46□□□□□ -0.09
DDX41-216ENST00000513562 PROSER3Q2NL68 480 aa14.46□□□□□ -0.09
DDX41-216ENST00000513562 HSP90AB3PQ58FF7 597 aa14.46□□□□□ -0.09
DDX41-216ENST00000513562 DBNDD1Q9H9R9 158 aa14.46□□□□□ -0.09
DDX41-216ENST00000513562 PDE4DIPQ5VU43 2346 aa14.46□□□□□ -0.1
DDX41-216ENST00000513562 SH3TC1Q8TE82 1336 aa14.45□□□□□ -0.1
DDX41-216ENST00000513562 LRRC37AA6NMS7 1700 aa14.45□□□□□ -0.1
DDX41-216ENST00000513562 REM2Q8IYK8 340 aaPredicted RBP14.45□□□□□ -0.1
DDX41-216ENST00000513562 PLEKHF1Q96S99 279 aa14.45□□□□□ -0.1
DDX41-216ENST00000513562 TRMT112Q9UI30 125 aaKnown RBP14.45□□□□□ -0.1
DDX41-216ENST00000513562 HPS5Q9UPZ3 1129 aa14.45□□□□□ -0.1
DDX41-216ENST00000513562 RTL9Q8NET4 1388 aa14.45□□□□□ -0.1
DDX41-216ENST00000513562 ANXA1P04083 346 aa14.44□□□□□ -0.1
DDX41-216ENST00000513562 NEFMP07197 916 aa14.44□□□□□ -0.1
DDX41-216ENST00000513562 NFE2L2Q16236 605 aa14.44□□□□□ -0.1
DDX41-216ENST00000513562 KIF4BQ2VIQ3 1234 aa14.44□□□□□ -0.1
DDX41-216ENST00000513562 RBM26Q5T8P6 1007 aaKnown RBP14.44□□□□□ -0.1
DDX41-216ENST00000513562 RASAL3Q86YV0 1011 aa14.44□□□□□ -0.1
DDX41-216ENST00000513562 SULF1Q8IWU6 871 aa14.44□□□□□ -0.1
DDX41-216ENST00000513562 CCER1Q8TC90 406 aaPredicted RBP14.44□□□□□ -0.1
DDX41-216ENST00000513562 GGA3Q9NZ52 723 aa14.44□□□□□ -0.1
DDX41-216ENST00000513562 ECE2O60344 883 aa14.43□□□□□ -0.1
DDX41-216ENST00000513562 EIF2S2P20042 333 aaKnown RBP14.43□□□□□ -0.1
DDX41-216ENST00000513562 TCIRG1Q13488 830 aa14.43□□□□□ -0.1
DDX41-216ENST00000513562 PKN2Q16513 984 aaKnown RBP14.43□□□□□ -0.1
DDX41-216ENST00000513562 CDCA5Q96FF9 252 aa14.43□□□□□ -0.1
DDX41-216ENST00000513562 POLLQ9UGP5 575 aa14.43□□□□□ -0.1
DDX41-216ENST00000513562 TSPYL4Q9UJ04 414 aa14.43□□□□□ -0.1
DDX41-216ENST00000513562 NSFL1CQ9UNZ2 370 aaKnown RBP14.43□□□□□ -0.1
DDX41-216ENST00000513562 ANKRD36CQ5JPF3 1778 aa14.42□□□□□ -0.1
DDX41-216ENST00000513562 RIMBP2O15034 1052 aa14.42□□□□□ -0.1
DDX41-216ENST00000513562 COPS6Q7L5N1 327 aa14.42□□□□□ -0.1
DDX41-216ENST00000513562 KCNQ5Q9NR82 932 aa14.42□□□□□ -0.1
DDX41-216ENST00000513562 LAMB2P55268 1798 aa14.42□□□□□ -0.1
DDX41-216ENST00000513562 ASTN2O75129 1339 aaPredicted RBP14.41□□□□□ -0.1
DDX41-216ENST00000513562 C6orf229H3BNL8 230 aa14.41□□□□□ -0.1
DDX41-216ENST00000513562 FKBP1BP68106 108 aa14.41□□□□□ -0.1
DDX41-216ENST00000513562 GPSM2P81274 684 aa14.41□□□□□ -0.1
DDX41-216ENST00000513562 XAGE3Q8WTP9 111 aa14.41□□□□□ -0.1
DDX41-216ENST00000513562 CELF1Q92879 486 aaKnown RBP14.41□□□□□ -0.1
DDX41-216ENST00000513562 EYA3Q99504 573 aa14.41□□□□□ -0.1
DDX41-216ENST00000513562 ZNF609O15014 1411 aa14.41□□□□□ -0.1
DDX41-216ENST00000513562 VIL1P09327 827 aaKnown RBP14.4□□□□□ -0.1
DDX41-216ENST00000513562 ZNF280AP59817 542 aaPredicted RBP14.4□□□□□ -0.1
DDX41-216ENST00000513562 AIMP1Q12904 312 aaKnown RBP14.4□□□□□ -0.1
DDX41-216ENST00000513562 SF3B3Q15393 1217 aaKnown RBP14.4□□□□□ -0.1
DDX41-216ENST00000513562 DOK7Q18PE1 504 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms