RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 MICALL2Q8IY33 904 aa14□□□□□ -0.17
CLDND1-227ENST00000513452 GBA2Q9HCG7 927 aaPredicted RBP14□□□□□ -0.17
CLDND1-227ENST00000513452 MIS18AQ9NYP9 233 aa14□□□□□ -0.17
CLDND1-227ENST00000513452 H7C1D1 291 aa13.99□□□□□ -0.17
CLDND1-227ENST00000513452 KRT26Q7Z3Y9 468 aa13.99□□□□□ -0.17
CLDND1-227ENST00000513452 ZNF34Q8IZ26 560 aa13.99□□□□□ -0.17
CLDND1-227ENST00000513452 NLRP3Q96P20 1036 aa13.99□□□□□ -0.17
CLDND1-227ENST00000513452 RNF186Q9NXI6 227 aa13.99□□□□□ -0.17
CLDND1-227ENST00000513452 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
CLDND1-227ENST00000513452 YDJCA8MPS7 323 aa13.98□□□□□ -0.17
CLDND1-227ENST00000513452 ADM5C9JUS6 153 aa13.98□□□□□ -0.17
CLDND1-227ENST00000513452 ZNF157P51786 506 aaPredicted RBP13.98□□□□□ -0.17
CLDND1-227ENST00000513452 TAF7Q15545 349 aaPredicted RBP13.98□□□□□ -0.17
CLDND1-227ENST00000513452 SAMD7Q7Z3H4 446 aa13.98□□□□□ -0.17
CLDND1-227ENST00000513452 PPP1R42Q7Z4L9 355 aa13.98□□□□□ -0.17
CLDND1-227ENST00000513452 CTU1Q7Z7A3 348 aaKnown RBP13.98□□□□□ -0.17
CLDND1-227ENST00000513452 MPNDQ8N594 471 aa13.98□□□□□ -0.17
CLDND1-227ENST00000513452 C2orf69Q8N8R5 385 aa13.98□□□□□ -0.17
CLDND1-227ENST00000513452 CCDC102AQ96A19 550 aa13.98□□□□□ -0.17
CLDND1-227ENST00000513452 U2AF1L5P0DN76 240 aaPredicted RBP13.97□□□□□ -0.17
CLDND1-227ENST00000513452 U2AF1Q01081 240 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLDND1-227ENST00000513452 TBC1D10BQ4KMP7 808 aaPredicted RBP13.97□□□□□ -0.17
CLDND1-227ENST00000513452 CFAP53Q96M91 514 aa13.97□□□□□ -0.17
CLDND1-227ENST00000513452 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
CLDND1-227ENST00000513452 DUOX1Q9NRD9 1551 aa13.96□□□□□ -0.17
CLDND1-227ENST00000513452 KDM3BQ7LBC6 1761 aa13.96□□□□□ -0.17
CLDND1-227ENST00000513452 PARP10Q53GL7 1025 aa13.96□□□□□ -0.17
CLDND1-227ENST00000513452 GIGYF2Q6Y7W6 1299 aaKnown RBP13.96□□□□□ -0.17
CLDND1-227ENST00000513452 SP8Q8IXZ3 490 aa13.96□□□□□ -0.17
CLDND1-227ENST00000513452 HPS5Q9UPZ3 1129 aa13.96□□□□□ -0.17
CLDND1-227ENST00000513452 HTATSF1O43719 755 aaKnown RBP13.95□□□□□ -0.18
CLDND1-227ENST00000513452 BBOX1O75936 387 aa13.95□□□□□ -0.18
CLDND1-227ENST00000513452 EGFRP00533 1210 aa13.95□□□□□ -0.18
CLDND1-227ENST00000513452 SLC10A3P09131 477 aa13.95□□□□□ -0.18
CLDND1-227ENST00000513452 UTP14AQ9BVJ6 771 aaKnown RBP13.95□□□□□ -0.18
CLDND1-227ENST00000513452 NUDCQ9Y266 331 aa13.95□□□□□ -0.18
CLDND1-227ENST00000513452 PSMD14O00487 310 aa13.94□□□□□ -0.18
CLDND1-227ENST00000513452 RBM26Q5T8P6 1007 aaKnown RBP13.94□□□□□ -0.18
CLDND1-227ENST00000513452 DPF2Q92785 391 aa13.94□□□□□ -0.18
CLDND1-227ENST00000513452 DCPSQ96C86 337 aaKnown RBP13.94□□□□□ -0.18
CLDND1-227ENST00000513452 CSRNP1Q96S65 589 aa13.94□□□□□ -0.18
CLDND1-227ENST00000513452 PCGF6Q9BYE7 350 aa13.94□□□□□ -0.18
CLDND1-227ENST00000513452 AKAP11Q9UKA4 1901 aa13.94□□□□□ -0.18
CLDND1-227ENST00000513452 LAMB2P55268 1798 aa13.94□□□□□ -0.18
CLDND1-227ENST00000513452 HCLS1P14317 486 aaPredicted RBP13.93□□□□□ -0.18
CLDND1-227ENST00000513452 EIF4A1P60842 406 aaKnown RBP13.93□□□□□ -0.18
CLDND1-227ENST00000513452 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
CLDND1-227ENST00000513452 SLC10A5Q5PT55 438 aa13.93□□□□□ -0.18
CLDND1-227ENST00000513452 DDX46Q7L014 1031 aaKnown RBP13.93□□□□□ -0.18
CLDND1-227ENST00000513452 DBNDD1Q9H9R9 158 aa13.93□□□□□ -0.18
CLDND1-227ENST00000513452 GRAPQ13588 217 aa13.92□□□□□ -0.18
CLDND1-227ENST00000513452 RASAL3Q86YV0 1011 aa13.92□□□□□ -0.18
CLDND1-227ENST00000513452 GRAPLQ8TC17 118 aaPredicted RBP13.92□□□□□ -0.18
CLDND1-227ENST00000513452 PNISRQ8TF01 805 aaKnown RBP13.92□□□□□ -0.18
CLDND1-227ENST00000513452 GGA3Q9NZ52 723 aa13.92□□□□□ -0.18
CLDND1-227ENST00000513452 LRRC37AA6NMS7 1700 aa13.91□□□□□ -0.18
CLDND1-227ENST00000513452 KIF4BQ2VIQ3 1234 aa13.91□□□□□ -0.18
CLDND1-227ENST00000513452 SULF1Q8IWU6 871 aa13.91□□□□□ -0.18
CLDND1-227ENST00000513452 THUMPD2Q9BTF0 503 aaKnown RBP13.91□□□□□ -0.18
CLDND1-227ENST00000513452 HDAC9Q9UKV0 1011 aa13.91□□□□□ -0.18
CLDND1-227ENST00000513452 ANKRD36CQ5JPF3 1778 aa13.91□□□□□ -0.18
CLDND1-227ENST00000513452 ERBB4Q15303 1308 aa13.9□□□□□ -0.18
CLDND1-227ENST00000513452 RIMBP2O15034 1052 aa13.9□□□□□ -0.18
CLDND1-227ENST00000513452 RPS12P25398 132 aaKnown RBP13.9□□□□□ -0.18
CLDND1-227ENST00000513452 WASHC4Q2M389 1173 aa13.9□□□□□ -0.18
CLDND1-227ENST00000513452 GCC1Q96CN9 775 aa13.9□□□□□ -0.18
CLDND1-227ENST00000513452 CDCA5Q96FF9 252 aa13.9□□□□□ -0.18
CLDND1-227ENST00000513452 ASTN2O75129 1339 aaPredicted RBP13.9□□□□□ -0.19
CLDND1-227ENST00000513452 RTL9Q8NET4 1388 aa13.89□□□□□ -0.19
CLDND1-227ENST00000513452 ECE2O60344 883 aa13.89□□□□□ -0.19
CLDND1-227ENST00000513452 PKN2Q16513 984 aaKnown RBP13.89□□□□□ -0.19
CLDND1-227ENST00000513452 ZNF296Q8WUU4 475 aaPredicted RBP13.89□□□□□ -0.19
CLDND1-227ENST00000513452 KCNQ5Q9NR82 932 aa13.89□□□□□ -0.19
CLDND1-227ENST00000513452 DDX60Q8IY21 1712 aaKnown RBP13.88□□□□□ -0.19
CLDND1-227ENST00000513452 TBC1D8O95759 1140 aa13.88□□□□□ -0.19
CLDND1-227ENST00000513452 DOK7Q18PE1 504 aa13.88□□□□□ -0.19
CLDND1-227ENST00000513452 TMC4Q7Z404 712 aa13.88□□□□□ -0.19
CLDND1-227ENST00000513452 LRP10Q7Z4F1 713 aa13.88□□□□□ -0.19
CLDND1-227ENST00000513452 NLRP10Q86W26 655 aa13.88□□□□□ -0.19
CLDND1-227ENST00000513452 REM2Q8IYK8 340 aaPredicted RBP13.88□□□□□ -0.19
CLDND1-227ENST00000513452 TRMT112Q9UI30 125 aaKnown RBP13.88□□□□□ -0.19
CLDND1-227ENST00000513452 NSFL1CQ9UNZ2 370 aaKnown RBP13.88□□□□□ -0.19
CLDND1-227ENST00000513452 TAF1P21675 1872 aa13.88□□□□□ -0.19
CLDND1-227ENST00000513452 POLR2AP24928 1970 aaKnown RBP13.87□□□□□ -0.19
CLDND1-227ENST00000513452 PAPPA2Q9BXP8 1791 aa13.87□□□□□ -0.19
CLDND1-227ENST00000513452 C6orf229H3BNL8 230 aa13.87□□□□□ -0.19
CLDND1-227ENST00000513452 ANXA1P04083 346 aa13.87□□□□□ -0.19
CLDND1-227ENST00000513452 PROSER3Q2NL68 480 aa13.87□□□□□ -0.19
CLDND1-227ENST00000513452 ZNF428Q96B54 188 aa13.87□□□□□ -0.19
CLDND1-227ENST00000513452 SH3TC1Q8TE82 1336 aa13.87□□□□□ -0.19
CLDND1-227ENST00000513452 DLG5Q8TDM6 1919 aa13.86□□□□□ -0.19
CLDND1-227ENST00000513452 EIF2S2P20042 333 aaKnown RBP13.86□□□□□ -0.19
CLDND1-227ENST00000513452 PDIA6Q15084 440 aa13.86□□□□□ -0.19
CLDND1-227ENST00000513452 HABP4Q5JVS0 413 aaKnown RBP13.86□□□□□ -0.19
CLDND1-227ENST00000513452 COL4A1P02462 1669 aa13.85□□□□□ -0.19
CLDND1-227ENST00000513452 NEFMP07197 916 aa13.85□□□□□ -0.19
CLDND1-227ENST00000513452 PPP2R1AP30153 589 aa13.85□□□□□ -0.19
CLDND1-227ENST00000513452 GPSM2P81274 684 aa13.85□□□□□ -0.19
CLDND1-227ENST00000513452 AIMP1Q12904 312 aaKnown RBP13.85□□□□□ -0.19
CLDND1-227ENST00000513452 HSP90AB3PQ58FF7 597 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms