RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 EXOC5O00471 708 aa12.56□□□□□ -0.4
CPNE4-209ENST00000512055 NBPF7P0C2Y1 421 aaPredicted RBP12.56□□□□□ -0.4
CPNE4-209ENST00000512055 CAMK4Q16566 473 aa12.56□□□□□ -0.4
CPNE4-209ENST00000512055 DZIP1Q86YF9 867 aaKnown RBP12.56□□□□□ -0.4
CPNE4-209ENST00000512055 KCNQ3O43525 872 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 CCDC192P0DO97 292 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 IMMTQ16891 758 aaKnown RBP12.55□□□□□ -0.4
CPNE4-209ENST00000512055 ZSCAN25Q6NSZ9 544 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 CCDC91Q7Z6B0 441 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 NECAB1Q8N987 351 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-209ENST00000512055 CLASP1Q7Z460 1538 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 SERPINC1P01008 464 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 CHMLP26374 656 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 LRP2BPQ9P2M1 347 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 GUCY1B3Q02153 619 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 NUP133Q8WUM0 1156 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 SH2B1Q9NRF2 756 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-209ENST00000512055 GNL3LQ9NVN8 582 aaKnown RBP12.55□□□□□ -0.4
CPNE4-209ENST00000512055 GJB2P29033 226 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 NACAP1Q9BZK3 213 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 ZNHIT6Q9NWK9 470 aaKnown RBP12.55□□□□□ -0.4
CPNE4-209ENST00000512055 MPHOSPH10O00566 681 aaKnown RBP12.55□□□□□ -0.4
CPNE4-209ENST00000512055 LDHAL6AQ6ZMR3 332 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 AIDAQ96BJ3 306 aa12.55□□□□□ -0.4
CPNE4-209ENST00000512055 BICC1Q9H694 974 aaKnown RBP12.54□□□□□ -0.4
CPNE4-209ENST00000512055 ARHGEF10O15013 1369 aa12.54□□□□□ -0.4
CPNE4-209ENST00000512055 CCT2P78371 535 aaKnown RBP12.54□□□□□ -0.4
CPNE4-209ENST00000512055 GBP3Q9H0R5 595 aa12.54□□□□□ -0.4
CPNE4-209ENST00000512055 RAI14Q9P0K7 980 aa12.54□□□□□ -0.4
CPNE4-209ENST00000512055 CEP83Q9Y592 693 aa12.54□□□□□ -0.4
CPNE4-209ENST00000512055 ATP7BP35670 1465 aa12.54□□□□□ -0.4
CPNE4-209ENST00000512055 STAMBPO95630 424 aa12.54□□□□□ -0.4
CPNE4-209ENST00000512055 IGHMBP2P38935 993 aaKnown RBP12.54□□□□□ -0.4
CPNE4-209ENST00000512055 KLHDC4Q8TBB5 520 aa12.54□□□□□ -0.4
CPNE4-209ENST00000512055 CCDC43Q96MW1 224 aaKnown RBP12.54□□□□□ -0.4
CPNE4-209ENST00000512055 AATKQ6ZMQ8 1374 aa12.54□□□□□ -0.4
CPNE4-209ENST00000512055 ABCA6Q8N139 1617 aa12.54□□□□□ -0.4
CPNE4-209ENST00000512055 STX6O43752 255 aa12.54□□□□□ -0.4
CPNE4-209ENST00000512055 UBE4AQ14139 1066 aa12.54□□□□□ -0.4
CPNE4-209ENST00000512055 TFIP11Q9UBB9 837 aaKnown RBP12.54□□□□□ -0.4
CPNE4-209ENST00000512055 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
CPNE4-209ENST00000512055 HAND2P61296 217 aa12.53□□□□□ -0.4
CPNE4-209ENST00000512055 ZNF790Q6PG37 636 aa12.53□□□□□ -0.4
CPNE4-209ENST00000512055 CEP57Q86XR8 500 aa12.53□□□□□ -0.4
CPNE4-209ENST00000512055 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
CPNE4-209ENST00000512055 RBM8AQ9Y5S9 174 aaKnown RBP12.53□□□□□ -0.4
CPNE4-209ENST00000512055 IQCEQ6IPM2 695 aa12.53□□□□□ -0.4
CPNE4-209ENST00000512055 NUP62CLQ9H1M0 184 aa12.53□□□□□ -0.4
CPNE4-209ENST00000512055 ABCA9Q8IUA7 1624 aa12.53□□□□□ -0.4
CPNE4-209ENST00000512055 ATP2C2O75185 946 aa12.53□□□□□ -0.4
CPNE4-209ENST00000512055 LRRC2Q9BYS8 371 aa12.53□□□□□ -0.4
CPNE4-209ENST00000512055 CCDC69A6NI79 296 aa12.53□□□□□ -0.4
CPNE4-209ENST00000512055 SMC1AQ14683 1233 aaKnown RBP12.53□□□□□ -0.4
CPNE4-209ENST00000512055 LUZP1Q86V48 1076 aa12.53□□□□□ -0.4
CPNE4-209ENST00000512055 PPFIBP1Q86W92 1011 aa12.53□□□□□ -0.4
CPNE4-209ENST00000512055 SMARCC1Q92922 1105 aaPredicted RBP12.53□□□□□ -0.4
CPNE4-209ENST00000512055 DDX23Q9BUQ8 820 aaKnown RBP12.53□□□□□ -0.4
CPNE4-209ENST00000512055 KIAA0232Q92628 1395 aa12.52□□□□□ -0.4
CPNE4-209ENST00000512055 FILIP1Q7Z7B0 1213 aa12.52□□□□□ -0.4
CPNE4-209ENST00000512055 DCAF5Q96JK2 942 aa12.52□□□□□ -0.4
CPNE4-209ENST00000512055 CEP152O94986 1710 aa12.52□□□□□ -0.4
CPNE4-209ENST00000512055 PLEKHG1Q9ULL1 1385 aa12.52□□□□□ -0.4
CPNE4-209ENST00000512055 KIF3CO14782 793 aa12.52□□□□□ -0.4
CPNE4-209ENST00000512055 EIF4A1P60842 406 aaKnown RBP12.52□□□□□ -0.4
CPNE4-209ENST00000512055 ANKRD18BA2A2Z9 1011 aa12.52□□□□□ -0.41
CPNE4-209ENST00000512055 XBP1P17861 261 aa12.52□□□□□ -0.41
CPNE4-209ENST00000512055 RFC1P35251 1148 aaPredicted RBP12.52□□□□□ -0.41
CPNE4-209ENST00000512055 PANK2Q9BZ23 570 aa12.52□□□□□ -0.41
CPNE4-209ENST00000512055 FAM184BQ9ULE4 1060 aa12.52□□□□□ -0.41
CPNE4-209ENST00000512055 GLI2P10070 1586 aa12.52□□□□□ -0.41
CPNE4-209ENST00000512055 HMGB1P09429 215 aaKnown RBP12.52□□□□□ -0.41
CPNE4-209ENST00000512055 GSPT1P15170 499 aaKnown RBP12.52□□□□□ -0.41
CPNE4-209ENST00000512055 TXLNAP40222 546 aa12.52□□□□□ -0.41
CPNE4-209ENST00000512055 NMIQ13287 307 aaPredicted RBP12.52□□□□□ -0.41
CPNE4-209ENST00000512055 FBF1Q8TES7 1133 aa12.52□□□□□ -0.41
CPNE4-209ENST00000512055 CPA1P15085 419 aa12.52□□□□□ -0.41
CPNE4-209ENST00000512055 KLHL40Q2TBA0 621 aa12.52□□□□□ -0.41
CPNE4-209ENST00000512055 NAP1L3Q99457 506 aaPredicted RBP12.51□□□□□ -0.41
CPNE4-209ENST00000512055 ANAPC15P60006 121 aa12.51□□□□□ -0.41
CPNE4-209ENST00000512055 RAB3GAP1Q15042 981 aa12.51□□□□□ -0.41
CPNE4-209ENST00000512055 SYCP1Q15431 976 aa12.51□□□□□ -0.41
CPNE4-209ENST00000512055 RAB11FIP4Q86YS3 637 aa12.51□□□□□ -0.41
CPNE4-209ENST00000512055 MIPOL1Q8TD10 442 aa12.51□□□□□ -0.41
CPNE4-209ENST00000512055 NEK1Q96PY6 1258 aa12.51□□□□□ -0.41
CPNE4-209ENST00000512055 MAGEC2Q9UBF1 373 aaPredicted RBP12.51□□□□□ -0.41
CPNE4-209ENST00000512055 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
CPNE4-209ENST00000512055 TRIM22Q8IYM9 498 aa12.51□□□□□ -0.41
CPNE4-209ENST00000512055 A2ML1A8K2U0 1454 aa12.5□□□□□ -0.41
CPNE4-209ENST00000512055 USP6P35125 1406 aa12.5□□□□□ -0.41
CPNE4-209ENST00000512055 IL2RBP14784 551 aa12.5□□□□□ -0.41
CPNE4-209ENST00000512055 USP44Q9H0E7 712 aa12.5□□□□□ -0.41
CPNE4-209ENST00000512055 BABAM1Q9NWV8 329 aa12.5□□□□□ -0.41
CPNE4-209ENST00000512055 SWAP70Q9UH65 585 aa12.5□□□□□ -0.41
CPNE4-209ENST00000512055 CCDC82Q8N4S0 544 aa12.5□□□□□ -0.41
CPNE4-209ENST00000512055 BRMS1Q9HCU9 246 aa12.5□□□□□ -0.41
CPNE4-209ENST00000512055 ADGRB3O60242 1522 aa12.5□□□□□ -0.41
CPNE4-209ENST00000512055 XRCC6P12956 609 aaKnown RBP eCLIP12.5□□□□□ -0.41
CPNE4-209ENST00000512055 TFCP2Q12800 502 aa12.5□□□□□ -0.41
CPNE4-209ENST00000512055 ZNF853P0CG23 659 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms