RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 PRDM11Q9NQV5 511 aa9.9□□□□□ -0.82
NR1I3-229ENST00000511748 POGKQ9P215 609 aa9.9□□□□□ -0.82
NR1I3-229ENST00000511748 AXIN1O15169 862 aa9.89□□□□□ -0.83
NR1I3-229ENST00000511748 CTC1Q2NKJ3 1217 aa9.89□□□□□ -0.83
NR1I3-229ENST00000511748 PLPP7Q8NBV4 271 aa9.89□□□□□ -0.83
NR1I3-229ENST00000511748 PRAM1Q96QH2 718 aa9.89□□□□□ -0.83
NR1I3-229ENST00000511748 SPATA31A1Q5TZJ5 1347 aa9.88□□□□□ -0.83
NR1I3-229ENST00000511748 TULP4Q9NRJ4 1543 aa9.88□□□□□ -0.83
NR1I3-229ENST00000511748 ATP7BP35670 1465 aa9.88□□□□□ -0.83
NR1I3-229ENST00000511748 BMP1P13497 986 aa9.88□□□□□ -0.83
NR1I3-229ENST00000511748 TRIM46Q7Z4K8 759 aa9.88□□□□□ -0.83
NR1I3-229ENST00000511748 KDF1Q8NAX2 398 aaPredicted RBP9.88□□□□□ -0.83
NR1I3-229ENST00000511748 SPON1Q9HCB6 807 aa9.88□□□□□ -0.83
NR1I3-229ENST00000511748 APBA3O96018 575 aa9.87□□□□□ -0.83
NR1I3-229ENST00000511748 SKIP12755 728 aa9.87□□□□□ -0.83
NR1I3-229ENST00000511748 ERVK-9P63128 1117 aa9.87□□□□□ -0.83
NR1I3-229ENST00000511748 PDE3BQ13370 1112 aa9.87□□□□□ -0.83
NR1I3-229ENST00000511748 EZH2Q15910 746 aaKnown RBP9.87□□□□□ -0.83
NR1I3-229ENST00000511748 Q6ZVU0 165 aa9.87□□□□□ -0.83
NR1I3-229ENST00000511748 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
NR1I3-229ENST00000511748 PPP1R1BQ9UD71 204 aaPredicted RBP9.87□□□□□ -0.83
NR1I3-229ENST00000511748 THRAP3Q9Y2W1 955 aaKnown RBP9.87□□□□□ -0.83
NR1I3-229ENST00000511748 RREB1Q92766 1687 aa9.87□□□□□ -0.83
NR1I3-229ENST00000511748 TRIM37O94972 964 aa9.86□□□□□ -0.83
NR1I3-229ENST00000511748 ITSN1Q15811 1721 aa9.86□□□□□ -0.83
NR1I3-229ENST00000511748 DEPDC4Q8N2C3 294 aa9.86□□□□□ -0.83
NR1I3-229ENST00000511748 MEIOBQ8N635 442 aa9.86□□□□□ -0.83
NR1I3-229ENST00000511748 NGDNQ8NEJ9 315 aaKnown RBP9.86□□□□□ -0.83
NR1I3-229ENST00000511748 PMFBP1Q8TBY8 1022 aa9.86□□□□□ -0.83
NR1I3-229ENST00000511748 AGBL1Q96MI9 1066 aa9.86□□□□□ -0.83
NR1I3-229ENST00000511748 MPHOSPH9Q99550 1183 aa9.86□□□□□ -0.83
NR1I3-229ENST00000511748 TFIP11Q9UBB9 837 aaKnown RBP9.86□□□□□ -0.83
NR1I3-229ENST00000511748 DOLKQ9UPQ8 538 aa9.86□□□□□ -0.83
NR1I3-229ENST00000511748 CRYBG1Q9Y4K1 1723 aa9.86□□□□□ -0.83
NR1I3-229ENST00000511748 OXLD1Q5BKU9 147 aa9.85□□□□□ -0.83
NR1I3-229ENST00000511748 PPP1R12CQ9BZL4 782 aa9.85□□□□□ -0.83
NR1I3-229ENST00000511748 OSBPL3Q9H4L5 887 aa9.85□□□□□ -0.83
NR1I3-229ENST00000511748 RGPD3A6NKT7 1758 aaPredicted RBP9.85□□□□□ -0.83
NR1I3-229ENST00000511748 RGPD4Q7Z3J3 1758 aa9.85□□□□□ -0.83
NR1I3-229ENST00000511748 PALM3A6NDB9 673 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-229ENST00000511748 USP17L5A8MUK1 530 aa9.84□□□□□ -0.83
NR1I3-229ENST00000511748 WASLO00401 505 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-229ENST00000511748 KCNQ2O43526 872 aa9.84□□□□□ -0.83
NR1I3-229ENST00000511748 CFAP70Q5T0N1 1121 aa9.84□□□□□ -0.83
NR1I3-229ENST00000511748 CC2D2BQ6DHV5 1058 aa9.84□□□□□ -0.83
NR1I3-229ENST00000511748 ERICH6Q7L0X2 663 aa9.84□□□□□ -0.83
NR1I3-229ENST00000511748 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
NR1I3-229ENST00000511748 NUP188Q5SRE5 1749 aa9.83□□□□□ -0.84
NR1I3-229ENST00000511748 POTECB2RU33 542 aa9.83□□□□□ -0.84
NR1I3-229ENST00000511748 ATP9BO43861 1147 aa9.83□□□□□ -0.84
NR1I3-229ENST00000511748 EVA1CP58658 441 aa9.83□□□□□ -0.84
NR1I3-229ENST00000511748 NCOA4Q13772 614 aa9.83□□□□□ -0.84
NR1I3-229ENST00000511748 TCP11L2Q8N4U5 519 aa9.83□□□□□ -0.84
NR1I3-229ENST00000511748 ATP13A2Q9NQ11 1180 aa9.83□□□□□ -0.84
NR1I3-229ENST00000511748 CPDO75976 1380 aa9.83□□□□□ -0.84
NR1I3-229ENST00000511748 KIAA0232Q92628 1395 aa9.83□□□□□ -0.84
NR1I3-229ENST00000511748 SSH2Q76I76 1423 aa9.82□□□□□ -0.84
NR1I3-229ENST00000511748 STAU1O95793 577 aaKnown RBP9.82□□□□□ -0.84
NR1I3-229ENST00000511748 SAFB2Q14151 953 aaKnown RBP eCLIP9.82□□□□□ -0.84
NR1I3-229ENST00000511748 MAP7D1Q3KQU3 841 aa9.82□□□□□ -0.84
NR1I3-229ENST00000511748 FAM182BQ5T319 152 aa9.82□□□□□ -0.84
NR1I3-229ENST00000511748 MRPL14Q6P1L8 145 aaKnown RBP9.82□□□□□ -0.84
NR1I3-229ENST00000511748 MAFBQ9Y5Q3 323 aaPredicted RBP9.82□□□□□ -0.84
NR1I3-229ENST00000511748 ADGRB1O14514 1584 aa9.82□□□□□ -0.84
NR1I3-229ENST00000511748 BRD4O60885 1362 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-229ENST00000511748 PLSCR1O15162 318 aa9.81□□□□□ -0.84
NR1I3-229ENST00000511748 ADH1AP07327 375 aa9.81□□□□□ -0.84
NR1I3-229ENST00000511748 STRN4Q9NRL3 753 aa9.81□□□□□ -0.84
NR1I3-229ENST00000511748 PHRF1Q9P1Y6 1649 aaKnown RBP9.81□□□□□ -0.84
NR1I3-229ENST00000511748 OVOS2A0A0G2JMS6 1433 aa9.81□□□□□ -0.84
NR1I3-229ENST00000511748 OVOS2A0A0J9YW53 1432 aa9.81□□□□□ -0.84
NR1I3-229ENST00000511748 OVOS2Q6IE36 1432 aa9.81□□□□□ -0.84
NR1I3-229ENST00000511748 PARP4Q9UKK3 1724 aaKnown RBP9.8□□□□□ -0.84
NR1I3-229ENST00000511748 USP17L3A6NCW0 530 aa9.8□□□□□ -0.84
NR1I3-229ENST00000511748 USP17L4A6NCW7 530 aa9.8□□□□□ -0.84
NR1I3-229ENST00000511748 RELBQ01201 579 aa9.8□□□□□ -0.84
NR1I3-229ENST00000511748 USP17L2Q6R6M4 530 aa9.8□□□□□ -0.84
NR1I3-229ENST00000511748 USP17L1Q7RTZ2 530 aa9.8□□□□□ -0.84
NR1I3-229ENST00000511748 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
NR1I3-229ENST00000511748 PURBQ96QR8 312 aaKnown RBP9.8□□□□□ -0.84
NR1I3-229ENST00000511748 GMPR2Q9P2T1 348 aaKnown RBP9.8□□□□□ -0.84
NR1I3-229ENST00000511748 PRR36Q9H6K5 1346 aa9.8□□□□□ -0.84
NR1I3-229ENST00000511748 POLR3AO14802 1390 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-229ENST00000511748 C6orf118Q5T5N4 469 aa9.79□□□□□ -0.84
NR1I3-229ENST00000511748 PLEKHM2Q8IWE5 1019 aa9.79□□□□□ -0.84
NR1I3-229ENST00000511748 CCDC82Q8N4S0 544 aa9.79□□□□□ -0.84
NR1I3-229ENST00000511748 ZFP42Q96MM3 310 aa9.79□□□□□ -0.84
NR1I3-229ENST00000511748 ZNF395Q9H8N7 513 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-229ENST00000511748 PTGIRP43119 386 aa9.78□□□□□ -0.84
NR1I3-229ENST00000511748 USP4Q13107 963 aa9.78□□□□□ -0.84
NR1I3-229ENST00000511748 NUDT16Q96DE0 195 aaKnown RBP9.78□□□□□ -0.84
NR1I3-229ENST00000511748 HIRIP3Q9BW71 556 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-229ENST00000511748 USP35Q9P2H5 1018 aa9.78□□□□□ -0.84
NR1I3-229ENST00000511748 TRAK1Q9UPV9 953 aa9.78□□□□□ -0.84
NR1I3-229ENST00000511748 PCDHGA11Q9Y5H2 935 aa9.78□□□□□ -0.84
NR1I3-229ENST00000511748 BCL9O00512 1426 aa9.78□□□□□ -0.84
NR1I3-229ENST00000511748 LMOD1P29536 600 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-229ENST00000511748 CHRNA2Q15822 529 aa9.77□□□□□ -0.85
NR1I3-229ENST00000511748 NLRP13Q86W25 1043 aa9.77□□□□□ -0.85
NR1I3-229ENST00000511748 PPARGC1BQ86YN6 1023 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms