RNA–Protein interactions for RNA: ENST00000511333.5

MATR3-217, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-217ENST00000511333 TNS4Q8IZW8 715 aa7.69□□□□□ -1.18
MATR3-217ENST00000511333 AGGF1Q8N302 714 aaeCLIP7.69□□□□□ -1.18
MATR3-217ENST00000511333 TBC1D2BQ9UPU7 963 aa7.68□□□□□ -1.18
MATR3-217ENST00000511333 JUNBP17275 347 aaPredicted RBP7.67□□□□□ -1.18
MATR3-217ENST00000511333 GRNP28799 593 aaKnown RBP7.67□□□□□ -1.18
MATR3-217ENST00000511333 SETDB1Q15047 1291 aa7.67□□□□□ -1.18
MATR3-217ENST00000511333 DHX32Q7L7V1 743 aaKnown RBP7.67□□□□□ -1.18
MATR3-217ENST00000511333 HCN4Q9Y3Q4 1203 aa7.67□□□□□ -1.18
MATR3-217ENST00000511333 LZTS3O60299 673 aaPredicted RBP7.66□□□□□ -1.18
MATR3-217ENST00000511333 EML3Q32P44 896 aa7.66□□□□□ -1.18
MATR3-217ENST00000511333 TRIM42Q8IWZ5 723 aa7.66□□□□□ -1.18
MATR3-217ENST00000511333 FAM46AQ96IP4 442 aaKnown RBP7.66□□□□□ -1.18
MATR3-217ENST00000511333 SMG9Q9H0W8 520 aaKnown RBP7.66□□□□□ -1.18
MATR3-217ENST00000511333 NOD1Q9Y239 953 aa7.66□□□□□ -1.18
MATR3-217ENST00000511333 CEP41Q9BYV8 373 aa7.65□□□□□ -1.18
MATR3-217ENST00000511333 C11orf16Q9NQ32 467 aa7.65□□□□□ -1.18
MATR3-217ENST00000511333 ZFATQ9P243 1243 aa7.65□□□□□ -1.18
MATR3-217ENST00000511333 PRNPP04156 253 aa7.64□□□□□ -1.19
MATR3-217ENST00000511333 NFXL1Q6ZNB6 911 aa7.64□□□□□ -1.19
MATR3-217ENST00000511333 TSPAN10Q9H1Z9 355 aaPredicted RBP7.64□□□□□ -1.19
MATR3-217ENST00000511333 DMGDHQ9UI17 866 aaKnown RBP7.64□□□□□ -1.19
MATR3-217ENST00000511333 CHMP3Q9Y3E7 222 aa7.64□□□□□ -1.19
MATR3-217ENST00000511333 HMX2A2RU54 273 aa7.63□□□□□ -1.19
MATR3-217ENST00000511333 DBX1A6NMT0 343 aa7.63□□□□□ -1.19
MATR3-217ENST00000511333 NRLP54845 237 aa7.63□□□□□ -1.19
MATR3-217ENST00000511333 MSMPQ1L6U9 139 aa7.63□□□□□ -1.19
MATR3-217ENST00000511333 SHKBP1Q8TBC3 707 aa7.63□□□□□ -1.19
MATR3-217ENST00000511333 MYRFLQ96LU7 910 aa7.63□□□□□ -1.19
MATR3-217ENST00000511333 VAC14Q08AM6 782 aa7.62□□□□□ -1.19
MATR3-217ENST00000511333 ALDH16A1Q8IZ83 802 aa7.62□□□□□ -1.19
MATR3-217ENST00000511333 STAG2Q8N3U4 1231 aa7.62□□□□□ -1.19
MATR3-217ENST00000511333 UTP4Q969X6 686 aaKnown RBP7.62□□□□□ -1.19
MATR3-217ENST00000511333 TGFBR3LH3BV60 316 aa7.61□□□□□ -1.19
MATR3-217ENST00000511333 HOXA10P31260 410 aaPredicted RBP7.61□□□□□ -1.19
MATR3-217ENST00000511333 SOX11P35716 441 aa7.61□□□□□ -1.19
MATR3-217ENST00000511333 PSME1Q06323 249 aa7.61□□□□□ -1.19
MATR3-217ENST00000511333 M0R2N6 131 aa7.6□□□□□ -1.19
MATR3-217ENST00000511333 PIK3CDO00329 1044 aa7.6□□□□□ -1.19
MATR3-217ENST00000511333 CLEC10AQ8IUN9 316 aa7.6□□□□□ -1.19
MATR3-217ENST00000511333 FAM83CQ9BQN1 747 aa7.6□□□□□ -1.19
MATR3-217ENST00000511333 TM4SF5O14894 197 aa7.59□□□□□ -1.19
MATR3-217ENST00000511333 EPB42P16452 691 aa7.59□□□□□ -1.19
MATR3-217ENST00000511333 MLLT1Q03111 559 aaPredicted RBP7.59□□□□□ -1.19
MATR3-217ENST00000511333 COL19A1Q14993 1142 aa7.59□□□□□ -1.19
MATR3-217ENST00000511333 IFT43Q96FT9 208 aa7.59□□□□□ -1.19
MATR3-217ENST00000511333 FBXL18Q96ME1 805 aa7.59□□□□□ -1.19
MATR3-217ENST00000511333 CCDC39Q9UFE4 941 aa7.59□□□□□ -1.19
MATR3-217ENST00000511333 ANGEL1Q9UNK9 670 aaKnown RBP7.59□□□□□ -1.19
MATR3-217ENST00000511333 WISP1O95388 367 aa7.58□□□□□ -1.2
MATR3-217ENST00000511333 FAM20CQ8IXL6 584 aa7.58□□□□□ -1.2
MATR3-217ENST00000511333 NFATC2IPQ8NCF5 419 aa7.58□□□□□ -1.2
MATR3-217ENST00000511333 PLD4Q96BZ4 506 aa7.58□□□□□ -1.2
MATR3-217ENST00000511333 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
MATR3-217ENST00000511333 PIM2Q9P1W9 311 aa7.58□□□□□ -1.2
MATR3-217ENST00000511333 BCS1LQ9Y276 419 aa7.58□□□□□ -1.2
MATR3-217ENST00000511333 C21orf2O43822 256 aa7.57□□□□□ -1.2
MATR3-217ENST00000511333 HOXD8P13378 290 aaPredicted RBP7.57□□□□□ -1.2
MATR3-217ENST00000511333 EIF2AK2P19525 551 aaKnown RBP7.57□□□□□ -1.2
MATR3-217ENST00000511333 INPP5BP32019 993 aa7.57□□□□□ -1.2
MATR3-217ENST00000511333 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.57□□□□□ -1.2
MATR3-217ENST00000511333 VSIG10LQ86VR7 867 aa7.57□□□□□ -1.2
MATR3-217ENST00000511333 CACTIN-AS1Q8N1I8 211 aa7.57□□□□□ -1.2
MATR3-217ENST00000511333 IL22RA1Q8N6P7 574 aa7.57□□□□□ -1.2
MATR3-217ENST00000511333 MUC3BQ9H195 1237 aa7.57□□□□□ -1.2
MATR3-217ENST00000511333 ARID4AP29374 1257 aaPredicted RBP7.56□□□□□ -1.2
MATR3-217ENST00000511333 CPSF6Q16630 551 aaKnown RBP eCLIP7.56□□□□□ -1.2
MATR3-217ENST00000511333 KRTAP19-4Q3LI73 84 aa7.56□□□□□ -1.2
MATR3-217ENST00000511333 C2orf49Q9BVC5 232 aaPredicted RBP7.56□□□□□ -1.2
MATR3-217ENST00000511333 PRM3Q9NNZ6 103 aa7.56□□□□□ -1.2
MATR3-217ENST00000511333 RARAP10276 462 aa7.55□□□□□ -1.2
MATR3-217ENST00000511333 SEMA3FQ13275 785 aa7.55□□□□□ -1.2
MATR3-217ENST00000511333 NCOA4Q13772 614 aa7.55□□□□□ -1.2
MATR3-217ENST00000511333 GALNT11Q8NCW6 608 aa7.55□□□□□ -1.2
MATR3-217ENST00000511333 PAPLNO95428 1278 aa7.54□□□□□ -1.2
MATR3-217ENST00000511333 TARSP26639 723 aaKnown RBP7.54□□□□□ -1.2
MATR3-217ENST00000511333 RTN1Q16799 776 aa7.54□□□□□ -1.2
MATR3-217ENST00000511333 WASHC4Q2M389 1173 aa7.54□□□□□ -1.2
MATR3-217ENST00000511333 ZNF648Q5T619 568 aaPredicted RBP7.54□□□□□ -1.2
MATR3-217ENST00000511333 ACAD11Q709F0 780 aa7.54□□□□□ -1.2
MATR3-217ENST00000511333 TLR7Q9NYK1 1049 aaKnown RBP7.54□□□□□ -1.2
MATR3-217ENST00000511333 KIAA1024Q9UPX6 916 aa7.54□□□□□ -1.2
MATR3-217ENST00000511333 ZBTB7BO15156 539 aaPredicted RBP7.53□□□□□ -1.2
MATR3-217ENST00000511333 PPP1R12BO60237 982 aaPredicted RBP7.53□□□□□ -1.2
MATR3-217ENST00000511333 FOSL1P15407 271 aa7.53□□□□□ -1.2
MATR3-217ENST00000511333 KIAA1211Q6ZU35 1233 aa7.53□□□□□ -1.2
MATR3-217ENST00000511333 HFE2Q6ZVN8 426 aa7.53□□□□□ -1.2
MATR3-217ENST00000511333 HIF3AQ9Y2N7 669 aa7.53□□□□□ -1.2
MATR3-217ENST00000511333 WDR64B1ANS9 1081 aa7.52□□□□□ -1.21
MATR3-217ENST00000511333 GDF6Q6KF10 455 aaPredicted RBP7.52□□□□□ -1.21
MATR3-217ENST00000511333 KRT25Q7Z3Z0 450 aa7.52□□□□□ -1.21
MATR3-217ENST00000511333 TPCN2Q8NHX9 752 aa7.52□□□□□ -1.21
MATR3-217ENST00000511333 SKIP12755 728 aa7.51□□□□□ -1.21
MATR3-217ENST00000511333 CD68P34810 354 aaPredicted RBP7.51□□□□□ -1.21
MATR3-217ENST00000511333 ZNF124Q15973 351 aa7.51□□□□□ -1.21
MATR3-217ENST00000511333 BEND4Q6ZU67 534 aa7.51□□□□□ -1.21
MATR3-217ENST00000511333 TRIM50Q86XT4 487 aa7.51□□□□□ -1.21
MATR3-217ENST00000511333 KCNK4Q9NYG8 393 aa7.51□□□□□ -1.21
MATR3-217ENST00000511333 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.51□□□□□ -1.21
MATR3-217ENST00000511333 LOC102724428A0A0B4J2F2 783 aa7.5□□□□□ -1.21
MATR3-217ENST00000511333 EGFRP00533 1210 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms