RNA–Protein interactions for RNA: ENST00000511130.6

CSNK1G3-206, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2 BASIC

Gene CSNK1G3, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-206ENST00000511130 CRY2Q49AN0 593 aa26.59■■□□□ 1.85
CSNK1G3-206ENST00000511130 LMBR1LQ6UX01 489 aa26.59■■□□□ 1.85
CSNK1G3-206ENST00000511130 COL11A2P13942 1736 aaPredicted RBP26.59■■□□□ 1.85
CSNK1G3-206ENST00000511130 CSF1RP07333 972 aa26.58■■□□□ 1.85
CSNK1G3-206ENST00000511130 HSP90B1P14625 803 aaKnown RBP26.58■■□□□ 1.85
CSNK1G3-206ENST00000511130 KIAA1551Q9HCM1 1747 aa26.58■■□□□ 1.85
CSNK1G3-206ENST00000511130 SRGNP10124 158 aa26.58■■□□□ 1.84
CSNK1G3-206ENST00000511130 H0YIN7 160 aa26.57■■□□□ 1.84
CSNK1G3-206ENST00000511130 KCNA3P22001 575 aa26.57■■□□□ 1.84
CSNK1G3-206ENST00000511130 RABL6Q3YEC7 729 aaPredicted RBP26.57■■□□□ 1.84
CSNK1G3-206ENST00000511130 GREM2Q9H772 168 aa26.57■■□□□ 1.84
CSNK1G3-206ENST00000511130 TGFB2P61812 414 aa26.56■■□□□ 1.84
CSNK1G3-206ENST00000511130 FAM161AQ3B820 660 aa26.56■■□□□ 1.84
CSNK1G3-206ENST00000511130 SEC31BQ9NQW1 1179 aa26.56■■□□□ 1.84
CSNK1G3-206ENST00000511130 CHMP3Q9Y3E7 222 aa26.56■■□□□ 1.84
CSNK1G3-206ENST00000511130 CCDC152Q4G0S7 254 aa26.55■■□□□ 1.84
CSNK1G3-206ENST00000511130 RPGRQ92834 1020 aaKnown RBP26.55■■□□□ 1.84
CSNK1G3-206ENST00000511130 ZNF622Q969S3 477 aaKnown RBP eCLIP26.55■■□□□ 1.84
CSNK1G3-206ENST00000511130 SYT17Q9BSW7 474 aa26.55■■□□□ 1.84
CSNK1G3-206ENST00000511130 HDAC5Q9UQL6 1122 aa26.55■■□□□ 1.84
CSNK1G3-206ENST00000511130 MYH3P11055 1940 aa26.54■■□□□ 1.84
CSNK1G3-206ENST00000511130 COL4A1P02462 1669 aa26.54■■□□□ 1.84
CSNK1G3-206ENST00000511130 HOXA10P31260 410 aaPredicted RBP26.54■■□□□ 1.84
CSNK1G3-206ENST00000511130 WWC3Q9ULE0 1092 aa26.54■■□□□ 1.84
CSNK1G3-206ENST00000511130 NPR1P16066 1061 aa26.53■■□□□ 1.84
CSNK1G3-206ENST00000511130 MASTLQ96GX5 879 aa26.53■■□□□ 1.84
CSNK1G3-206ENST00000511130 CHMP4BQ9H444 224 aaKnown RBP26.53■■□□□ 1.84
CSNK1G3-206ENST00000511130 PDZRN3Q9UPQ7 1066 aa26.52■■□□□ 1.84
CSNK1G3-206ENST00000511130 TAF1P21675 1872 aa26.51■■□□□ 1.84
CSNK1G3-206ENST00000511130 STYK1Q6J9G0 422 aa26.51■■□□□ 1.83
CSNK1G3-206ENST00000511130 DDX46Q7L014 1031 aaKnown RBP26.51■■□□□ 1.83
CSNK1G3-206ENST00000511130 RBM17Q96I25 401 aaKnown RBP26.51■■□□□ 1.83
CSNK1G3-206ENST00000511130 PNMA6EA0A0J9YXQ4 647 aa26.5■■□□□ 1.83
CSNK1G3-206ENST00000511130 ITGA6P23229 1130 aa26.5■■□□□ 1.83
CSNK1G3-206ENST00000511130 CEP85Q6P2H3 762 aa26.5■■□□□ 1.83
CSNK1G3-206ENST00000511130 SLC51AQ86UW1 340 aa26.5■■□□□ 1.83
CSNK1G3-206ENST00000511130 CELF1Q92879 486 aaKnown RBP26.5■■□□□ 1.83
CSNK1G3-206ENST00000511130 RTL9Q8NET4 1388 aa26.5■■□□□ 1.83
CSNK1G3-206ENST00000511130 ATP8B2P98198 1209 aa26.49■■□□□ 1.83
CSNK1G3-206ENST00000511130 ZNF594Q96JF6 807 aaPredicted RBP26.49■■□□□ 1.83
CSNK1G3-206ENST00000511130 CRAMP1Q96RY5 1269 aa26.49■■□□□ 1.83
CSNK1G3-206ENST00000511130 RFX5P48382 616 aaPredicted RBP26.48■■□□□ 1.83
CSNK1G3-206ENST00000511130 IFIT5Q13325 482 aaKnown RBP26.48■■□□□ 1.83
CSNK1G3-206ENST00000511130 MTX1Q13505 466 aa26.48■■□□□ 1.83
CSNK1G3-206ENST00000511130 KLHDC4Q8TBB5 520 aa26.48■■□□□ 1.83
CSNK1G3-206ENST00000511130 PCDHB15Q9Y5E8 787 aa26.48■■□□□ 1.83
CSNK1G3-206ENST00000511130 DLEC1Q9Y238 1755 aa26.48■■□□□ 1.83
CSNK1G3-206ENST00000511130 ANKRD18BA2A2Z9 1011 aa26.47■■□□□ 1.83
CSNK1G3-206ENST00000511130 SRGAP3O43295 1099 aa26.47■■□□□ 1.83
CSNK1G3-206ENST00000511130 GRAPQ13588 217 aa26.47■■□□□ 1.83
CSNK1G3-206ENST00000511130 SIRT2Q8IXJ6 389 aa26.47■■□□□ 1.83
CSNK1G3-206ENST00000511130 GRAPLQ8TC17 118 aaPredicted RBP26.47■■□□□ 1.83
CSNK1G3-206ENST00000511130 SRCAPQ6ZRS2 3230 aa26.46■■□□□ 1.83
CSNK1G3-206ENST00000511130 CCDC57Q2TAC2 916 aa26.46■■□□□ 1.83
CSNK1G3-206ENST00000511130 CNKSR1Q969H4 720 aa26.46■■□□□ 1.83
CSNK1G3-206ENST00000511130 PIM2Q9P1W9 311 aa26.46■■□□□ 1.83
CSNK1G3-206ENST00000511130 ALDH1B1P30837 517 aa26.45■■□□□ 1.82
CSNK1G3-206ENST00000511130 RPS8P62241 208 aaKnown RBP26.45■■□□□ 1.82
CSNK1G3-206ENST00000511130 TTLL6Q8N841 843 aa26.45■■□□□ 1.82
CSNK1G3-206ENST00000511130 SLX4Q8IY92 1834 aa26.44■■□□□ 1.82
CSNK1G3-206ENST00000511130 POLA2Q14181 598 aa26.44■■□□□ 1.82
CSNK1G3-206ENST00000511130 PRPF40BQ6NWY9 871 aaKnown RBP26.44■■□□□ 1.82
CSNK1G3-206ENST00000511130 ZNF219Q9P2Y4 722 aaPredicted RBP26.44■■□□□ 1.82
CSNK1G3-206ENST00000511130 PA2G4Q9UQ80 394 aaKnown RBP26.44■■□□□ 1.82
CSNK1G3-206ENST00000511130 NEFLP07196 543 aa26.43■■□□□ 1.82
CSNK1G3-206ENST00000511130 PTPN12Q05209 780 aaKnown RBP26.43■■□□□ 1.82
CSNK1G3-206ENST00000511130 ANKRD18AQ8IVF6 992 aa26.43■■□□□ 1.82
CSNK1G3-206ENST00000511130 RPAP2Q8IXW5 612 aaPredicted RBP26.43■■□□□ 1.82
CSNK1G3-206ENST00000511130 SSH3Q8TE77 659 aa26.43■■□□□ 1.82
CSNK1G3-206ENST00000511130 CDC5LQ99459 802 aaKnown RBP26.43■■□□□ 1.82
CSNK1G3-206ENST00000511130 BRCA1P38398 1863 aaKnown RBP26.42■■□□□ 1.82
CSNK1G3-206ENST00000511130 CACNA1SQ13698 1873 aa26.42■■□□□ 1.82
CSNK1G3-206ENST00000511130 TAF7LQ5H9L4 462 aa26.42■■□□□ 1.82
CSNK1G3-206ENST00000511130 OLFM4Q6UX06 510 aa26.42■■□□□ 1.82
CSNK1G3-206ENST00000511130 PUS3Q9BZE2 481 aaKnown RBP26.42■■□□□ 1.82
CSNK1G3-206ENST00000511130 PPEF1O14829 653 aaPredicted RBP26.41■■□□□ 1.82
CSNK1G3-206ENST00000511130 BBOX1O75936 387 aa26.41■■□□□ 1.82
CSNK1G3-206ENST00000511130 DALRD3Q5D0E6 543 aaKnown RBP26.41■■□□□ 1.82
CSNK1G3-206ENST00000511130 IGHMBP2P38935 993 aaKnown RBP26.4■■□□□ 1.82
CSNK1G3-206ENST00000511130 BCS1LQ9Y276 419 aa26.4■■□□□ 1.82
CSNK1G3-206ENST00000511130 SPEF2Q9C093 1822 aa26.39■■□□□ 1.82
CSNK1G3-206ENST00000511130 AAMPQ13685 434 aa26.39■■□□□ 1.82
CSNK1G3-206ENST00000511130 LRRC24Q50LG9 513 aa26.39■■□□□ 1.82
CSNK1G3-206ENST00000511130 C7orf43Q8WVR3 580 aa26.39■■□□□ 1.82
CSNK1G3-206ENST00000511130 SIL1Q9H173 461 aa26.39■■□□□ 1.82
CSNK1G3-206ENST00000511130 C21orf2O43822 256 aa26.38■■□□□ 1.81
CSNK1G3-206ENST00000511130 COPRSQ9NQ92 184 aa26.38■■□□□ 1.81
CSNK1G3-206ENST00000511130 LDHAL6AQ6ZMR3 332 aa26.37■■□□□ 1.81
CSNK1G3-206ENST00000511130 MPHOSPH8Q99549 860 aa26.37■■□□□ 1.81
CSNK1G3-206ENST00000511130 BSDC1Q9NW68 430 aaPredicted RBP26.37■■□□□ 1.81
CSNK1G3-206ENST00000511130 ATP6V0A2Q9Y487 856 aa26.36■■□□□ 1.81
CSNK1G3-206ENST00000511130 SP8Q8IXZ3 490 aa26.35■■□□□ 1.81
CSNK1G3-206ENST00000511130 PELP1Q8IZL8 1130 aaKnown RBP26.35■■□□□ 1.81
CSNK1G3-206ENST00000511130 CNNM1Q9NRU3 951 aa26.35■■□□□ 1.81
CSNK1G3-206ENST00000511130 MINPP1Q9UNW1 487 aa26.35■■□□□ 1.81
CSNK1G3-206ENST00000511130 EYA2O00167 538 aa26.34■■□□□ 1.81
CSNK1G3-206ENST00000511130 ATG9AQ7Z3C6 839 aa26.34■■□□□ 1.81
CSNK1G3-206ENST00000511130 RIPOR2Q9Y4F9 1068 aa26.34■■□□□ 1.81
CSNK1G3-206ENST00000511130 HMMRO75330 724 aa26.33■■□□□ 1.81
CSNK1G3-206ENST00000511130 SURF6O75683 361 aaKnown RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 1643.9 ms