RNA–Protein interactions for RNA: ENST00000509977.1

RETREG1-205, Transcript of reticulophagy regulator 1, humanhuman

TSL 5

Gene RETREG1, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-205ENST00000509977 ZNF454Q8N9F8 522 aa9.41□□□□□ -0.9
RETREG1-205ENST00000509977 ANKRD36CQ5JPF3 1778 aa9.41□□□□□ -0.9
RETREG1-205ENST00000509977 ERVV-1B6SEH8 477 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 CHL1O00533 1208 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 DPYSL4O14531 572 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 SRGNP10124 158 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 PDE6BP35913 854 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 PRELPP51888 382 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 RIPK4P57078 832 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 LMOD3Q0VAK6 560 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 BICDL1Q6ZP65 573 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 ANKRD13DQ6ZTN6 518 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 C2CD5Q86YS7 1000 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 TTLL6Q8N841 843 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 RUNDC1Q96C34 613 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 SETDB2Q96T68 719 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 GPBP1L1Q9HC44 474 aaPredicted RBP9.4□□□□□ -0.9
RETREG1-205ENST00000509977 ADAMTS8Q9UP79 889 aa9.4□□□□□ -0.9
RETREG1-205ENST00000509977 SNED1Q8TER0 1413 aa9.39□□□□□ -0.91
RETREG1-205ENST00000509977 MAP3K15Q6ZN16 1313 aa9.39□□□□□ -0.91
RETREG1-205ENST00000509977 H0YIN7 160 aa9.39□□□□□ -0.91
RETREG1-205ENST00000509977 LSM11P83369 360 aaKnown RBP eCLIP9.39□□□□□ -0.91
RETREG1-205ENST00000509977 PDIA6Q15084 440 aa9.39□□□□□ -0.91
RETREG1-205ENST00000509977 HLFQ16534 295 aa9.39□□□□□ -0.91
RETREG1-205ENST00000509977 C9orf131Q5VYM1 1079 aa9.39□□□□□ -0.91
RETREG1-205ENST00000509977 STYK1Q6J9G0 422 aa9.39□□□□□ -0.91
RETREG1-205ENST00000509977 CNBD1Q8NA66 436 aa9.39□□□□□ -0.91
RETREG1-205ENST00000509977 ZNF652Q9Y2D9 606 aa9.39□□□□□ -0.91
RETREG1-205ENST00000509977 ZNF330Q9Y3S2 320 aaPredicted RBP9.39□□□□□ -0.91
RETREG1-205ENST00000509977 LTBP3Q9NS15 1303 aa9.38□□□□□ -0.91
RETREG1-205ENST00000509977 NFKBIEO00221 500 aa9.38□□□□□ -0.91
RETREG1-205ENST00000509977 ARHGAP33O14559 1287 aa9.38□□□□□ -0.91
RETREG1-205ENST00000509977 FOSBP53539 338 aa9.38□□□□□ -0.91
RETREG1-205ENST00000509977 E2F4Q16254 413 aa9.38□□□□□ -0.91
RETREG1-205ENST00000509977 C7orf43Q8WVR3 580 aa9.38□□□□□ -0.91
RETREG1-205ENST00000509977 TSPYL4Q9UJ04 414 aa9.38□□□□□ -0.91
RETREG1-205ENST00000509977 WDR90Q96KV7 1748 aa9.38□□□□□ -0.91
RETREG1-205ENST00000509977 ST5P78524 1137 aa9.37□□□□□ -0.91
RETREG1-205ENST00000509977 PLCB2Q00722 1185 aa9.37□□□□□ -0.91
RETREG1-205ENST00000509977 CRY2Q49AN0 593 aa9.37□□□□□ -0.91
RETREG1-205ENST00000509977 TTLL7Q6ZT98 887 aa9.37□□□□□ -0.91
RETREG1-205ENST00000509977 NPM2Q86SE8 214 aaKnown RBP9.37□□□□□ -0.91
RETREG1-205ENST00000509977 CCDC146Q8IYE0 955 aa9.37□□□□□ -0.91
RETREG1-205ENST00000509977 LAMB2P55268 1798 aa9.37□□□□□ -0.91
RETREG1-205ENST00000509977 ABCC12Q96J65 1359 aa9.37□□□□□ -0.91
RETREG1-205ENST00000509977 UBN2Q6ZU65 1347 aa9.36□□□□□ -0.91
RETREG1-205ENST00000509977 HOXB7P09629 217 aa9.36□□□□□ -0.91
RETREG1-205ENST00000509977 ZNF853P0CG23 659 aa9.36□□□□□ -0.91
RETREG1-205ENST00000509977 LMNB1P20700 586 aa9.36□□□□□ -0.91
RETREG1-205ENST00000509977 ZEB1P37275 1124 aaPredicted RBP9.36□□□□□ -0.91
RETREG1-205ENST00000509977 PSEN2P49810 448 aa9.36□□□□□ -0.91
RETREG1-205ENST00000509977 RASSF7Q02833 373 aa9.36□□□□□ -0.91
RETREG1-205ENST00000509977 WDR43Q15061 677 aaKnown RBP eCLIP9.36□□□□□ -0.91
RETREG1-205ENST00000509977 TPTE2Q6XPS3 522 aa9.36□□□□□ -0.91
RETREG1-205ENST00000509977 GIGYF2Q6Y7W6 1299 aaKnown RBP9.36□□□□□ -0.91
RETREG1-205ENST00000509977 NBPF5PQ86XG9 351 aaPredicted RBP9.36□□□□□ -0.91
RETREG1-205ENST00000509977 ZNF34Q8IZ26 560 aa9.36□□□□□ -0.91
RETREG1-205ENST00000509977 CCDC24Q8N4L8 307 aa9.36□□□□□ -0.91
RETREG1-205ENST00000509977 CNKSR1Q969H4 720 aa9.36□□□□□ -0.91
RETREG1-205ENST00000509977 MASTLQ96GX5 879 aa9.36□□□□□ -0.91
RETREG1-205ENST00000509977 RNF181Q9P0P0 153 aa9.36□□□□□ -0.91
RETREG1-205ENST00000509977 NIP7Q9Y221 180 aaKnown RBP eCLIP9.36□□□□□ -0.91
RETREG1-205ENST00000509977 PROSER3Q2NL68 480 aa9.35□□□□□ -0.91
RETREG1-205ENST00000509977 PRPF40BQ6NWY9 871 aaKnown RBP9.35□□□□□ -0.91
RETREG1-205ENST00000509977 ZNF526Q8TF50 670 aaPredicted RBP9.35□□□□□ -0.91
RETREG1-205ENST00000509977 NMRK2Q9NPI5 230 aa9.35□□□□□ -0.91
RETREG1-205ENST00000509977 RRP7AQ9Y3A4 280 aaKnown RBP9.35□□□□□ -0.91
RETREG1-205ENST00000509977 SENP3-EIF4A1A0A087X0R7 540 aa9.34□□□□□ -0.91
RETREG1-205ENST00000509977 TOMM70O94826 608 aa9.34□□□□□ -0.91
RETREG1-205ENST00000509977 NTSR2O95665 410 aa9.34□□□□□ -0.91
RETREG1-205ENST00000509977 NPR1P16066 1061 aa9.34□□□□□ -0.91
RETREG1-205ENST00000509977 KCNK17Q96T54 332 aa9.34□□□□□ -0.91
RETREG1-205ENST00000509977 DDX60Q8IY21 1712 aaKnown RBP9.34□□□□□ -0.92
RETREG1-205ENST00000509977 RNF123Q5XPI4 1314 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 KDM2BQ8NHM5 1336 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 GLTPD2A6NH11 291 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 C21orf2O43822 256 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 MYL6BP14649 208 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 HSPA6P17066 643 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 HOXA10P31260 410 aaPredicted RBP9.33□□□□□ -0.92
RETREG1-205ENST00000509977 KRT24Q2M2I5 525 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 CCDC184Q52MB2 194 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 SOGA3Q5TF21 947 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 SUSD4Q5VX71 490 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 DMRTA1Q5VZB9 504 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 KIF6Q6ZMV9 814 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 RBM46Q8TBY0 533 aaKnown RBP9.33□□□□□ -0.92
RETREG1-205ENST00000509977 ZNF622Q969S3 477 aaKnown RBP eCLIP9.33□□□□□ -0.92
RETREG1-205ENST00000509977 ZDHHC16Q969W1 377 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 NYXQ9GZU5 481 aa9.33□□□□□ -0.92
RETREG1-205ENST00000509977 DDX21Q9NR30 783 aaKnown RBP eCLIP9.33□□□□□ -0.92
RETREG1-205ENST00000509977 LRRC37AA6NMS7 1700 aa9.32□□□□□ -0.92
RETREG1-205ENST00000509977 POTECB2RU33 542 aa9.32□□□□□ -0.92
RETREG1-205ENST00000509977 APAF1O14727 1248 aa9.32□□□□□ -0.92
RETREG1-205ENST00000509977 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
RETREG1-205ENST00000509977 PARP10Q53GL7 1025 aa9.32□□□□□ -0.92
RETREG1-205ENST00000509977 SLC10A5Q5PT55 438 aa9.32□□□□□ -0.92
RETREG1-205ENST00000509977 TAOK3Q9H2K8 898 aa9.32□□□□□ -0.92
RETREG1-205ENST00000509977 ZBTB3Q9H5J0 574 aa9.32□□□□□ -0.92
RETREG1-205ENST00000509977 MBIPQ9NS73 344 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms