RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 GPTP24298 496 aa9.49□□□□□ -0.89
SSBP2-213ENST00000509743 ITPK1Q13572 414 aa9.49□□□□□ -0.89
SSBP2-213ENST00000509743 MEX3CQ5U5Q3 659 aaKnown RBP9.49□□□□□ -0.89
SSBP2-213ENST00000509743 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.49□□□□□ -0.89
SSBP2-213ENST00000509743 HAUS7Q99871 368 aa9.49□□□□□ -0.89
SSBP2-213ENST00000509743 DBNDD2Q9BQY9 259 aa9.49□□□□□ -0.89
SSBP2-213ENST00000509743 BOLA2Q9H3K6 86 aa9.49□□□□□ -0.89
SSBP2-213ENST00000509743 TBC1D2BQ9UPU7 963 aa9.49□□□□□ -0.89
SSBP2-213ENST00000509743 CNTNAP4Q9C0A0 1308 aa9.49□□□□□ -0.89
SSBP2-213ENST00000509743 ABCC12Q96J65 1359 aa9.49□□□□□ -0.89
SSBP2-213ENST00000509743 ANKRD18BA2A2Z9 1011 aa9.48□□□□□ -0.89
SSBP2-213ENST00000509743 CAMTA2O94983 1202 aa9.48□□□□□ -0.89
SSBP2-213ENST00000509743 NEK4P51957 841 aa9.48□□□□□ -0.89
SSBP2-213ENST00000509743 SPRYD3Q8NCJ5 442 aa9.48□□□□□ -0.89
SSBP2-213ENST00000509743 TTLL11Q8NHH1 800 aa9.48□□□□□ -0.89
SSBP2-213ENST00000509743 CWC22Q9HCG8 908 aaKnown RBP9.48□□□□□ -0.89
SSBP2-213ENST00000509743 CCDC171Q6TFL3 1326 aa9.48□□□□□ -0.89
SSBP2-213ENST00000509743 UBN2Q6ZU65 1347 aa9.48□□□□□ -0.89
SSBP2-213ENST00000509743 ZNF831Q5JPB2 1677 aa9.48□□□□□ -0.89
SSBP2-213ENST00000509743 THSD7AQ9UPZ6 1657 aa9.48□□□□□ -0.89
SSBP2-213ENST00000509743 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.48□□□□□ -0.89
SSBP2-213ENST00000509743 ITGB4P16144 1822 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 TUBGCP6Q96RT7 1819 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 A0A1B0GUL7 405 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 KCNQ2O43526 872 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 NMIQ13287 307 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-213ENST00000509743 LRRFIP1Q32MZ4 808 aaKnown RBP9.47□□□□□ -0.89
SSBP2-213ENST00000509743 LRRC24Q50LG9 513 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 RC3H1Q5TC82 1133 aaKnown RBP9.47□□□□□ -0.89
SSBP2-213ENST00000509743 CLEC4GQ6UXB4 293 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 KBTBD3Q8NAB2 608 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 KCNB2Q92953 911 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 ZNF594Q96JF6 807 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-213ENST00000509743 NEUROD6Q96NK8 337 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 UTP14AQ9BVJ6 771 aaKnown RBP9.47□□□□□ -0.89
SSBP2-213ENST00000509743 IL25Q9H293 177 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 PALD1Q9ULE6 856 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 SH3TC1Q8TE82 1336 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 RTL9Q8NET4 1388 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 MED23Q9ULK4 1368 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 AFDNP55196 1824 aaKnown RBP9.47□□□□□ -0.89
SSBP2-213ENST00000509743 ATRNO75882 1429 aa9.47□□□□□ -0.89
SSBP2-213ENST00000509743 FRAT2O75474 233 aaPredicted RBP9.46□□□□□ -0.9
SSBP2-213ENST00000509743 ZKSCAN1P17029 563 aaPredicted RBP9.46□□□□□ -0.9
SSBP2-213ENST00000509743 PTMSP20962 102 aa9.46□□□□□ -0.9
SSBP2-213ENST00000509743 ITGA6P23229 1130 aa9.46□□□□□ -0.9
SSBP2-213ENST00000509743 CCDC158Q5M9N0 1113 aa9.46□□□□□ -0.9
SSBP2-213ENST00000509743 RNF20Q5VTR2 975 aa9.46□□□□□ -0.9
SSBP2-213ENST00000509743 GJD4Q96KN9 370 aaPredicted RBP9.46□□□□□ -0.9
SSBP2-213ENST00000509743 DNAJC2Q99543 621 aaKnown RBP9.46□□□□□ -0.9
SSBP2-213ENST00000509743 PUS3Q9BZE2 481 aaKnown RBP9.46□□□□□ -0.9
SSBP2-213ENST00000509743 TM6SF1Q9BZW5 370 aa9.46□□□□□ -0.9
SSBP2-213ENST00000509743 SNX14Q9Y5W7 946 aa9.46□□□□□ -0.9
SSBP2-213ENST00000509743 AFF2P51816 1311 aa9.46□□□□□ -0.9
SSBP2-213ENST00000509743 A0A0D9SFI3 127 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 DDX11L8A8MPP1 907 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 ONECUT3O60422 494 aaPredicted RBP9.45□□□□□ -0.9
SSBP2-213ENST00000509743 HSPA1LP34931 641 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 KCNJ4P48050 445 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 NUCB2P80303 420 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 RAB3GAP1Q15042 981 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 ATP2B3Q16720 1220 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 METTL24Q5JXM2 366 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 GORABQ5T7V8 394 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 SUSD4Q5VX71 490 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 LDHAL6AQ6ZMR3 332 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 LINC00116Q8NCU8 138 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 MAP4K1Q92918 833 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 INTS4Q96HW7 963 aaKnown RBP9.45□□□□□ -0.9
SSBP2-213ENST00000509743 FAM227BQ96M60 508 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 GBP4Q96PP9 640 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 GREM2Q9H772 168 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 CNNM1Q9NRU3 951 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 PAG1Q9NWQ8 432 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 HMG20BQ9P0W2 317 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 TRPC5Q9UL62 973 aaPredicted RBP9.45□□□□□ -0.9
SSBP2-213ENST00000509743 RIPOR2Q9Y4F9 1068 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 MROH5Q6ZUA9 1318 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 RIC1Q4ADV7 1423 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 LRP5O75197 1615 aa9.45□□□□□ -0.9
SSBP2-213ENST00000509743 NTSR2O95665 410 aa9.44□□□□□ -0.9
SSBP2-213ENST00000509743 IFIT1P09914 478 aaKnown RBP9.44□□□□□ -0.9
SSBP2-213ENST00000509743 PSMA5P28066 241 aa9.44□□□□□ -0.9
SSBP2-213ENST00000509743 TIMM10P62072 90 aa9.44□□□□□ -0.9
SSBP2-213ENST00000509743 PTH1RQ03431 593 aa9.44□□□□□ -0.9
SSBP2-213ENST00000509743 CUL4AQ13619 759 aa9.44□□□□□ -0.9
SSBP2-213ENST00000509743 NECTIN1Q15223 517 aa9.44□□□□□ -0.9
SSBP2-213ENST00000509743 CCDC152Q4G0S7 254 aa9.44□□□□□ -0.9
SSBP2-213ENST00000509743 TTC39AQ5SRH9 613 aa9.44□□□□□ -0.9
SSBP2-213ENST00000509743 SYNE4Q8N205 404 aa9.44□□□□□ -0.9
SSBP2-213ENST00000509743 TMX3Q96JJ7 454 aa9.44□□□□□ -0.9
SSBP2-213ENST00000509743 ZNF512BQ96KM6 892 aaPredicted RBP9.44□□□□□ -0.9
SSBP2-213ENST00000509743 HELLSQ9NRZ9 838 aa9.44□□□□□ -0.9
SSBP2-213ENST00000509743 NIP7Q9Y221 180 aaKnown RBP eCLIP9.44□□□□□ -0.9
SSBP2-213ENST00000509743 RBM8AQ9Y5S9 174 aaKnown RBP9.44□□□□□ -0.9
SSBP2-213ENST00000509743 U3KPZ7 1027 aaPredicted RBP9.44□□□□□ -0.9
SSBP2-213ENST00000509743 GOLIM4O00461 696 aa9.43□□□□□ -0.9
SSBP2-213ENST00000509743 RPS6KA4O75676 772 aa9.43□□□□□ -0.9
SSBP2-213ENST00000509743 ZFYP08048 801 aaPredicted RBP9.43□□□□□ -0.9
SSBP2-213ENST00000509743 MCM4P33991 863 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms