RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 SND1Q7KZF4 910 aaKnown RBP eCLIP6.5□□□□□ -1.37
SPARCL1-206ENST00000509407 MICALL1Q8N3F8 863 aa6.5□□□□□ -1.37
SPARCL1-206ENST00000509407 FNBP4Q8N3X1 1017 aaPredicted RBP6.5□□□□□ -1.37
SPARCL1-206ENST00000509407 CHMP7Q8WUX9 453 aaPredicted RBP6.5□□□□□ -1.37
SPARCL1-206ENST00000509407 NGLY1Q96IV0 654 aa6.5□□□□□ -1.37
SPARCL1-206ENST00000509407 NACC1Q96RE7 527 aa6.5□□□□□ -1.37
SPARCL1-206ENST00000509407 C2orf49Q9BVC5 232 aaPredicted RBP6.5□□□□□ -1.37
SPARCL1-206ENST00000509407 HIRIP3Q9BW71 556 aaPredicted RBP6.5□□□□□ -1.37
SPARCL1-206ENST00000509407 EFCC1Q9HA90 598 aa6.5□□□□□ -1.37
SPARCL1-206ENST00000509407 RBM47A0AV96 593 aaKnown RBP6.49□□□□□ -1.37
SPARCL1-206ENST00000509407 HMGB1P1B2RPK0 211 aaPredicted RBP6.49□□□□□ -1.37
SPARCL1-206ENST00000509407 C21orf2O43822 256 aa6.49□□□□□ -1.37
SPARCL1-206ENST00000509407 ALBP02768 609 aa6.49□□□□□ -1.37
SPARCL1-206ENST00000509407 TRIM28Q13263 835 aaKnown RBP6.49□□□□□ -1.37
SPARCL1-206ENST00000509407 DOC2BQ14184 412 aa6.49□□□□□ -1.37
SPARCL1-206ENST00000509407 XP32Q5T750 250 aa6.49□□□□□ -1.37
SPARCL1-206ENST00000509407 BTLAQ7Z6A9 289 aa6.49□□□□□ -1.37
SPARCL1-206ENST00000509407 BHMTQ93088 406 aa6.49□□□□□ -1.37
SPARCL1-206ENST00000509407 HINFPQ9BQA5 517 aa6.49□□□□□ -1.37
SPARCL1-206ENST00000509407 UBE2OQ9C0C9 1292 aaKnown RBP6.49□□□□□ -1.37
SPARCL1-206ENST00000509407 STARD13Q9Y3M8 1113 aa6.49□□□□□ -1.37
SPARCL1-206ENST00000509407 CALR3Q96L12 384 aaKnown RBP6.48□□□□□ -1.37
SPARCL1-206ENST00000509407 DNAJC2Q99543 621 aaKnown RBP6.48□□□□□ -1.37
SPARCL1-206ENST00000509407 TPD52L2O43399 206 aaKnown RBP6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 LILRB5O75023 590 aa6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 MCCP23508 829 aa6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 TBC1D8BQ0IIM8 1120 aa6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 AAMPQ13685 434 aa6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 RTN1Q16799 776 aa6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 IER5Q5VY09 327 aa6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 GPATCH11Q8N954 259 aa6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 C8orf37Q96NL8 207 aa6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 PNMA5Q96PV4 448 aa6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 SEMA6BQ9H3T3 888 aa6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 PRDM10Q9NQV6 1147 aa6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 PPME1Q9Y570 386 aa6.47□□□□□ -1.37
SPARCL1-206ENST00000509407 TGFBR3LH3BV60 316 aa6.46□□□□□ -1.38
SPARCL1-206ENST00000509407 CENPBP07199 599 aaPredicted RBP6.46□□□□□ -1.38
SPARCL1-206ENST00000509407 NID1P14543 1247 aa6.46□□□□□ -1.38
SPARCL1-206ENST00000509407 EPB42P16452 691 aa6.46□□□□□ -1.38
SPARCL1-206ENST00000509407 IGFBP4P22692 258 aa6.46□□□□□ -1.38
SPARCL1-206ENST00000509407 DPYDQ12882 1025 aa6.46□□□□□ -1.38
SPARCL1-206ENST00000509407 COL9A3Q14050 684 aaPredicted RBP6.46□□□□□ -1.38
SPARCL1-206ENST00000509407 C8orf86Q6ZUL3 223 aa6.46□□□□□ -1.38
SPARCL1-206ENST00000509407 PPP1R12CQ9BZL4 782 aa6.46□□□□□ -1.38
SPARCL1-206ENST00000509407 IGFLR1Q9H665 355 aa6.46□□□□□ -1.38
SPARCL1-206ENST00000509407 SLC6A14Q9UN76 642 aa6.46□□□□□ -1.38
SPARCL1-206ENST00000509407 USTQ9Y2C2 406 aa6.46□□□□□ -1.38
SPARCL1-206ENST00000509407 FAM196BA6NMK8 535 aa6.45□□□□□ -1.38
SPARCL1-206ENST00000509407 FAM229AH3BQW9 127 aa6.45□□□□□ -1.38
SPARCL1-206ENST00000509407 TCF3P15923 654 aa6.45□□□□□ -1.38
SPARCL1-206ENST00000509407 PTK7Q13308 1070 aa6.45□□□□□ -1.38
SPARCL1-206ENST00000509407 CRTC2Q53ET0 693 aaPredicted RBP6.45□□□□□ -1.38
SPARCL1-206ENST00000509407 TRAPPC3LQ5T215 181 aa6.45□□□□□ -1.38
SPARCL1-206ENST00000509407 C20orf204Q6ZNR8 217 aa6.45□□□□□ -1.38
SPARCL1-206ENST00000509407 Q8N3U1 123 aa6.45□□□□□ -1.38
SPARCL1-206ENST00000509407 UBXN4Q92575 508 aa6.45□□□□□ -1.38
SPARCL1-206ENST00000509407 VRTNQ9H8Y1 702 aa6.45□□□□□ -1.38
SPARCL1-206ENST00000509407 IVNS1ABPQ9Y6Y0 642 aa6.45□□□□□ -1.38
SPARCL1-206ENST00000509407 USP17L15C9J2P7 530 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 USP17L10C9JJH3 530 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 USP17L13C9JLJ4 530 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 USP17L12C9JPN9 530 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 USP17L11C9JVI0 530 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 USP17L21D6R901 530 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 USP17L18D6R9N7 530 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 USP17L22D6RA61 530 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 USP17L17D6RBQ6 530 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 USP17L19D6RCP7 530 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 USP17L20D6RJB6 530 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 RAC1P63000 192 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 USP17L24Q0WX57 530 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 CCINQ13939 588 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 PCSK7Q16549 785 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 KANK4Q5T7N3 995 aaPredicted RBP6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 SPTY2D1Q68D10 685 aaPredicted RBP6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 ANKMY2Q8IV38 441 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 MRRFQ96E11 262 aaKnown RBP6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 GSX2Q9BZM3 304 aa6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 JPH1Q9HDC5 661 aaPredicted RBP6.44□□□□□ -1.38
SPARCL1-206ENST00000509407 C9orf172C9J069 976 aa6.43□□□□□ -1.38
SPARCL1-206ENST00000509407 VTI1AQ96AJ9 217 aa6.43□□□□□ -1.38
SPARCL1-206ENST00000509407 DNAJB12Q9NXW2 375 aaKnown RBP6.43□□□□□ -1.38
SPARCL1-206ENST00000509407 NEFMP07197 916 aa6.42□□□□□ -1.38
SPARCL1-206ENST00000509407 ELNP15502 786 aa6.42□□□□□ -1.38
SPARCL1-206ENST00000509407 NFKB1P19838 968 aa6.42□□□□□ -1.38
SPARCL1-206ENST00000509407 LMOD1P29536 600 aaPredicted RBP6.42□□□□□ -1.38
SPARCL1-206ENST00000509407 GRIK4Q16099 956 aa6.42□□□□□ -1.38
SPARCL1-206ENST00000509407 MICAL1Q8TDZ2 1067 aa6.42□□□□□ -1.38
SPARCL1-206ENST00000509407 NUDT8Q8WV74 236 aa6.42□□□□□ -1.38
SPARCL1-206ENST00000509407 TPSG1Q9NRR2 321 aa6.42□□□□□ -1.38
SPARCL1-206ENST00000509407 A0A0A0MRY4 1105 aa6.41□□□□□ -1.38
SPARCL1-206ENST00000509407 FOXO3O43524 673 aa6.41□□□□□ -1.38
SPARCL1-206ENST00000509407 RGS9O75916 674 aaPredicted RBP6.41□□□□□ -1.38
SPARCL1-206ENST00000509407 SF3A1Q15459 793 aaKnown RBP6.41□□□□□ -1.38
SPARCL1-206ENST00000509407 RSPO4Q2I0M5 234 aaPredicted RBP6.41□□□□□ -1.38
SPARCL1-206ENST00000509407 PSAPL1Q6NUJ1 521 aa6.41□□□□□ -1.38
SPARCL1-206ENST00000509407 CNPY4Q8N129 248 aa6.41□□□□□ -1.38
SPARCL1-206ENST00000509407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.41□□□□□ -1.38
SPARCL1-206ENST00000509407 KIAA1522Q9P206 1035 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms