RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 A0A0C4DFX4 3053 aa15.05■□□□□ 0
NEDD9-212ENST00000508800 CENPFP49454 3210 aa15.05■□□□□ -0
NEDD9-212ENST00000508800 BBOX1O75936 387 aa15.05■□□□□ -0
NEDD9-212ENST00000508800 RPS12P25398 132 aaKnown RBP15.05■□□□□ -0
NEDD9-212ENST00000508800 FKBP1BP68106 108 aa15.05■□□□□ -0
NEDD9-212ENST00000508800 KIF6Q6ZMV9 814 aa15.05■□□□□ -0
NEDD9-212ENST00000508800 MPNDQ8N594 471 aa15.05■□□□□ -0
NEDD9-212ENST00000508800 ANKRD36CQ5JPF3 1778 aa15.04■□□□□ -0
NEDD9-212ENST00000508800 DDX60Q8IY21 1712 aaKnown RBP15.04■□□□□ -0
NEDD9-212ENST00000508800 COL3A1P02461 1466 aaPredicted RBP15.04■□□□□ -0
NEDD9-212ENST00000508800 EIF4G2P78344 907 aaKnown RBP eCLIP15.04■□□□□ -0
NEDD9-212ENST00000508800 PARP10Q53GL7 1025 aa15.04■□□□□ -0
NEDD9-212ENST00000508800 PPP1R42Q7Z4L9 355 aa15.04■□□□□ -0
NEDD9-212ENST00000508800 SP8Q8IXZ3 490 aa15.04■□□□□ -0
NEDD9-212ENST00000508800 RTF1Q92541 710 aaKnown RBP15.04■□□□□ -0
NEDD9-212ENST00000508800 RBBP6Q7Z6E9 1792 aaKnown RBP15.03■□□□□ -0
NEDD9-212ENST00000508800 PAPPA2Q9BXP8 1791 aa15.03■□□□□ -0
NEDD9-212ENST00000508800 UBN2Q6ZU65 1347 aa15.03■□□□□ -0
NEDD9-212ENST00000508800 U2SURPO15042 1029 aaKnown RBP15.03■□□□□ -0
NEDD9-212ENST00000508800 NTSR2O95665 410 aa15.03■□□□□ -0
NEDD9-212ENST00000508800 FXR1P51114 621 aaKnown RBP eCLIP15.03■□□□□ -0
NEDD9-212ENST00000508800 TMC4Q7Z404 712 aa15.03■□□□□ -0
NEDD9-212ENST00000508800 SULF1Q8IWU6 871 aa15.03■□□□□ -0
NEDD9-212ENST00000508800 ZNF296Q8WUU4 475 aaPredicted RBP15.03■□□□□ -0
NEDD9-212ENST00000508800 ABCC4O15439 1325 aa15.02■□□□□ -0
NEDD9-212ENST00000508800 SAMD7Q7Z3H4 446 aa15.02■□□□□ -0
NEDD9-212ENST00000508800 RASAL3Q86YV0 1011 aa15.02■□□□□ -0
NEDD9-212ENST00000508800 LRRC37AA6NMS7 1700 aa15.01□□□□□ -0.01
NEDD9-212ENST00000508800 YDJCA8MPS7 323 aa15.01□□□□□ -0.01
NEDD9-212ENST00000508800 ADM5C9JUS6 153 aa15.01□□□□□ -0.01
NEDD9-212ENST00000508800 GPTP24298 496 aa15.01□□□□□ -0.01
NEDD9-212ENST00000508800 TBC1D10BQ4KMP7 808 aaPredicted RBP15.01□□□□□ -0.01
NEDD9-212ENST00000508800 SUSD4Q5VX71 490 aa15.01□□□□□ -0.01
NEDD9-212ENST00000508800 INTS3Q68E01 1043 aaKnown RBP15.01□□□□□ -0.01
NEDD9-212ENST00000508800 SLC51AQ86UW1 340 aa15.01□□□□□ -0.01
NEDD9-212ENST00000508800 ZNF34Q8IZ26 560 aa15.01□□□□□ -0.01
NEDD9-212ENST00000508800 SZT2Q5T011 3432 aa15.01□□□□□ -0.01
NEDD9-212ENST00000508800 LAMB2P55268 1798 aa15.01□□□□□ -0.01
NEDD9-212ENST00000508800 SHTN1A0MZ66 631 aa15□□□□□ -0.01
NEDD9-212ENST00000508800 SLC10A5Q5PT55 438 aa15□□□□□ -0.01
NEDD9-212ENST00000508800 GIGYF2Q6Y7W6 1299 aaKnown RBP15□□□□□ -0.01
NEDD9-212ENST00000508800 BRCA2P51587 3418 aa15□□□□□ -0.01
NEDD9-212ENST00000508800 DUOX1Q9NRD9 1551 aa14.99□□□□□ -0.01
NEDD9-212ENST00000508800 GPR25O00155 361 aa14.99□□□□□ -0.01
NEDD9-212ENST00000508800 PSMD14O00487 310 aa14.99□□□□□ -0.01
NEDD9-212ENST00000508800 HTATSF1O43719 755 aaKnown RBP14.99□□□□□ -0.01
NEDD9-212ENST00000508800 DLK2Q6UY11 383 aa14.99□□□□□ -0.01
NEDD9-212ENST00000508800 C3orf67Q6ZVT6 689 aa14.99□□□□□ -0.01
NEDD9-212ENST00000508800 CFHR5Q9BXR6 569 aa14.99□□□□□ -0.01
NEDD9-212ENST00000508800 KIF4BQ2VIQ3 1234 aa14.98□□□□□ -0.01
NEDD9-212ENST00000508800 CDCA5Q96FF9 252 aa14.98□□□□□ -0.01
NEDD9-212ENST00000508800 GGA3Q9NZ52 723 aa14.98□□□□□ -0.01
NEDD9-212ENST00000508800 ZBTB12Q9Y330 459 aaPredicted RBP14.98□□□□□ -0.01
NEDD9-212ENST00000508800 RANBP2P49792 3224 aaKnown RBP14.97□□□□□ -0.01
NEDD9-212ENST00000508800 FKTNO75072 461 aa14.97□□□□□ -0.01
NEDD9-212ENST00000508800 TBC1D8O95759 1140 aa14.97□□□□□ -0.01
NEDD9-212ENST00000508800 HSPA5P11021 654 aaKnown RBP14.97□□□□□ -0.01
NEDD9-212ENST00000508800 PRKAR2BP31323 418 aa14.97□□□□□ -0.01
NEDD9-212ENST00000508800 TTLL7Q6ZT98 887 aa14.97□□□□□ -0.01
NEDD9-212ENST00000508800 DDX46Q7L014 1031 aaKnown RBP14.97□□□□□ -0.01
NEDD9-212ENST00000508800 NGEFQ8N5V2 710 aa14.97□□□□□ -0.01
NEDD9-212ENST00000508800 NECTIN2Q92692 538 aa14.97□□□□□ -0.01
NEDD9-212ENST00000508800 PHACTR3Q96KR7 559 aa14.97□□□□□ -0.01
NEDD9-212ENST00000508800 UTP14AQ9BVJ6 771 aaKnown RBP14.97□□□□□ -0.01
NEDD9-212ENST00000508800 ZBTB3Q9H5J0 574 aa14.97□□□□□ -0.01
NEDD9-212ENST00000508800 ERBB4Q15303 1308 aa14.96□□□□□ -0.01
NEDD9-212ENST00000508800 EGFRP00533 1210 aa14.96□□□□□ -0.01
NEDD9-212ENST00000508800 TM4SF4P48230 202 aa14.96□□□□□ -0.01
NEDD9-212ENST00000508800 SREBF2Q12772 1141 aa14.96□□□□□ -0.01
NEDD9-212ENST00000508800 GRAPQ13588 217 aa14.96□□□□□ -0.01
NEDD9-212ENST00000508800 TAF7Q15545 349 aaPredicted RBP14.96□□□□□ -0.01
NEDD9-212ENST00000508800 WASHC4Q2M389 1173 aa14.96□□□□□ -0.01
NEDD9-212ENST00000508800 MCM10Q7L590 875 aa14.96□□□□□ -0.01
NEDD9-212ENST00000508800 GRAPLQ8TC17 118 aaPredicted RBP14.96□□□□□ -0.01
NEDD9-212ENST00000508800 KDM3BQ7LBC6 1761 aa14.96□□□□□ -0.02
NEDD9-212ENST00000508800 ZNF609O15014 1411 aa14.95□□□□□ -0.02
NEDD9-212ENST00000508800 PNISRQ8TF01 805 aaKnown RBP14.95□□□□□ -0.02
NEDD9-212ENST00000508800 RSPH6AQ9H0K4 717 aa14.95□□□□□ -0.02
NEDD9-212ENST00000508800 RRP7AQ9Y3A4 280 aaKnown RBP14.95□□□□□ -0.02
NEDD9-212ENST00000508800 PITPNM2Q9BZ72 1349 aa14.94□□□□□ -0.02
NEDD9-212ENST00000508800 RBM26Q5T8P6 1007 aaKnown RBP14.94□□□□□ -0.02
NEDD9-212ENST00000508800 ALDH1A1P00352 501 aa14.93□□□□□ -0.02
NEDD9-212ENST00000508800 EYA3Q99504 573 aa14.93□□□□□ -0.02
NEDD9-212ENST00000508800 DBNDD1Q9H9R9 158 aa14.93□□□□□ -0.02
NEDD9-212ENST00000508800 ECE2O60344 883 aa14.92□□□□□ -0.02
NEDD9-212ENST00000508800 MYL6BP14649 208 aa14.92□□□□□ -0.02
NEDD9-212ENST00000508800 CFAP53Q96M91 514 aa14.92□□□□□ -0.02
NEDD9-212ENST00000508800 NUDCQ9Y266 331 aa14.92□□□□□ -0.02
NEDD9-212ENST00000508800 PSME4Q14997 1843 aa14.92□□□□□ -0.02
NEDD9-212ENST00000508800 SCN9AQ15858 1988 aa14.91□□□□□ -0.02
NEDD9-212ENST00000508800 TAF1P21675 1872 aa14.91□□□□□ -0.02
NEDD9-212ENST00000508800 RTL9Q8NET4 1388 aa14.91□□□□□ -0.02
NEDD9-212ENST00000508800 VIL1P09327 827 aaKnown RBP14.91□□□□□ -0.02
NEDD9-212ENST00000508800 HSP90AB3PQ58FF7 597 aa14.91□□□□□ -0.02
NEDD9-212ENST00000508800 CC2D1BQ5T0F9 858 aaKnown RBP14.91□□□□□ -0.02
NEDD9-212ENST00000508800 ANGEL2Q5VTE6 544 aaKnown RBP14.91□□□□□ -0.02
NEDD9-212ENST00000508800 POTEFA5A3E0 1075 aa14.9□□□□□ -0.02
NEDD9-212ENST00000508800 ZNF280AP59817 542 aaPredicted RBP14.9□□□□□ -0.02
NEDD9-212ENST00000508800 AGBL3Q8NEM8 1001 aa14.9□□□□□ -0.02
NEDD9-212ENST00000508800 NSFL1CQ9UNZ2 370 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms