RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 XYLBO75191 536 aa10.54□□□□□ -0.72
TOPBP1-206ENST00000508524 ZAP70P43403 619 aa10.54□□□□□ -0.72
TOPBP1-206ENST00000508524 COL9A3Q14050 684 aaPredicted RBP10.54□□□□□ -0.72
TOPBP1-206ENST00000508524 TRIP4Q15650 581 aaPredicted RBP10.54□□□□□ -0.72
TOPBP1-206ENST00000508524 C20orf204Q6ZNR8 217 aa10.54□□□□□ -0.72
TOPBP1-206ENST00000508524 MICALL1Q8N3F8 863 aa10.54□□□□□ -0.72
TOPBP1-206ENST00000508524 ZNF417Q8TAU3 575 aa10.54□□□□□ -0.72
TOPBP1-206ENST00000508524 HELQQ8TDG4 1101 aa10.54□□□□□ -0.72
TOPBP1-206ENST00000508524 ZNF587Q96SQ5 575 aaPredicted RBP10.54□□□□□ -0.72
TOPBP1-206ENST00000508524 NAGPAQ9UK23 515 aa10.54□□□□□ -0.72
TOPBP1-206ENST00000508524 PIK3R2O00459 728 aa10.53□□□□□ -0.72
TOPBP1-206ENST00000508524 C8orf86Q6ZUL3 223 aa10.53□□□□□ -0.72
TOPBP1-206ENST00000508524 PRDM6Q9NQX0 595 aa10.53□□□□□ -0.72
TOPBP1-206ENST00000508524 RARAP10276 462 aa10.52□□□□□ -0.73
TOPBP1-206ENST00000508524 DHX32Q7L7V1 743 aaKnown RBP10.52□□□□□ -0.73
TOPBP1-206ENST00000508524 ABTB2Q8N961 1025 aa10.52□□□□□ -0.73
TOPBP1-206ENST00000508524 ITGB2P05107 769 aa10.51□□□□□ -0.73
TOPBP1-206ENST00000508524 ZBTB42B2RXF5 422 aa10.5□□□□□ -0.73
TOPBP1-206ENST00000508524 ALYREFQ86V81 257 aaKnown RBP10.5□□□□□ -0.73
TOPBP1-206ENST00000508524 TRPM4Q8TD43 1214 aa10.5□□□□□ -0.73
TOPBP1-206ENST00000508524 GTF3C2Q8WUA4 911 aaPredicted RBP10.5□□□□□ -0.73
TOPBP1-206ENST00000508524 PIK3R5Q8WYR1 880 aa10.5□□□□□ -0.73
TOPBP1-206ENST00000508524 NOP53Q9NZM5 478 aaKnown RBP10.5□□□□□ -0.73
TOPBP1-206ENST00000508524 KRBA1A5PL33 1030 aa10.49□□□□□ -0.73
TOPBP1-206ENST00000508524 NID1P14543 1247 aa10.49□□□□□ -0.73
TOPBP1-206ENST00000508524 GPLD1P80108 840 aa10.49□□□□□ -0.73
TOPBP1-206ENST00000508524 GPR152Q8TDT2 470 aa10.49□□□□□ -0.73
TOPBP1-206ENST00000508524 PLVAPQ9BX97 442 aa10.49□□□□□ -0.73
TOPBP1-206ENST00000508524 FAM13BQ9NYF5 915 aa10.49□□□□□ -0.73
TOPBP1-206ENST00000508524 PLA2G4EQ3MJ16 856 aa10.48□□□□□ -0.73
TOPBP1-206ENST00000508524 ATCAYQ86WG3 371 aa10.48□□□□□ -0.73
TOPBP1-206ENST00000508524 TLR7Q9NYK1 1049 aaKnown RBP10.48□□□□□ -0.73
TOPBP1-206ENST00000508524 MMP20O60882 483 aa10.47□□□□□ -0.73
TOPBP1-206ENST00000508524 NRLP54845 237 aa10.47□□□□□ -0.73
TOPBP1-206ENST00000508524 MTMR3Q13615 1198 aa10.47□□□□□ -0.73
TOPBP1-206ENST00000508524 PCSK7Q16549 785 aa10.47□□□□□ -0.73
TOPBP1-206ENST00000508524 PSAPL1Q6NUJ1 521 aa10.47□□□□□ -0.73
TOPBP1-206ENST00000508524 FAM35AQ86V20 835 aa10.47□□□□□ -0.73
TOPBP1-206ENST00000508524 RETREG2Q8NC44 543 aa10.47□□□□□ -0.73
TOPBP1-206ENST00000508524 UBAP1LF5GYI3 381 aa10.46□□□□□ -0.73
TOPBP1-206ENST00000508524 LILRB5O75023 590 aa10.46□□□□□ -0.73
TOPBP1-206ENST00000508524 CPB1P15086 417 aa10.46□□□□□ -0.73
TOPBP1-206ENST00000508524 MPSTP25325 297 aa10.46□□□□□ -0.73
TOPBP1-206ENST00000508524 MLLT1Q03111 559 aaPredicted RBP10.46□□□□□ -0.73
TOPBP1-206ENST00000508524 NLRP13Q86W25 1043 aa10.46□□□□□ -0.73
TOPBP1-206ENST00000508524 NUDT8Q8WV74 236 aa10.46□□□□□ -0.73
TOPBP1-206ENST00000508524 JPH1Q9HDC5 661 aaPredicted RBP10.46□□□□□ -0.73
TOPBP1-206ENST00000508524 GPAT2Q6NUI2 795 aa10.45□□□□□ -0.74
TOPBP1-206ENST00000508524 LPIN3Q9BQK8 851 aa10.45□□□□□ -0.74
TOPBP1-206ENST00000508524 HOXD8P13378 290 aaPredicted RBP10.44□□□□□ -0.74
TOPBP1-206ENST00000508524 NPR3P17342 541 aa10.44□□□□□ -0.74
TOPBP1-206ENST00000508524 SOX18P35713 384 aa10.44□□□□□ -0.74
TOPBP1-206ENST00000508524 EIF1AXP47813 144 aaKnown RBP10.44□□□□□ -0.74
TOPBP1-206ENST00000508524 NOM1Q5C9Z4 860 aaKnown RBP10.44□□□□□ -0.74
TOPBP1-206ENST00000508524 PERM1Q5SV97 790 aa10.44□□□□□ -0.74
TOPBP1-206ENST00000508524 PSAPP07602 524 aa10.43□□□□□ -0.74
TOPBP1-206ENST00000508524 AFF1P51825 1210 aaKnown RBP10.43□□□□□ -0.74
TOPBP1-206ENST00000508524 PLAURQ03405 335 aa10.43□□□□□ -0.74
TOPBP1-206ENST00000508524 NUDT16Q96DE0 195 aaKnown RBP10.43□□□□□ -0.74
TOPBP1-206ENST00000508524 FRRS1LQ9P0K9 344 aa10.43□□□□□ -0.74
TOPBP1-206ENST00000508524 FNDC3AQ9Y2H6 1198 aaKnown RBP10.43□□□□□ -0.74
TOPBP1-206ENST00000508524 RGS9O75916 674 aaPredicted RBP10.42□□□□□ -0.74
TOPBP1-206ENST00000508524 ARID4AP29374 1257 aaPredicted RBP10.42□□□□□ -0.74
TOPBP1-206ENST00000508524 B4GALNT3Q6L9W6 998 aa10.42□□□□□ -0.74
TOPBP1-206ENST00000508524 HFE2Q6ZVN8 426 aa10.42□□□□□ -0.74
TOPBP1-206ENST00000508524 MTMR7Q9Y216 660 aa10.42□□□□□ -0.74
TOPBP1-206ENST00000508524 SPDYE3A6NKU9 549 aa10.41□□□□□ -0.74
TOPBP1-206ENST00000508524 IGHA1P01876 353 aa10.41□□□□□ -0.74
TOPBP1-206ENST00000508524 ZNF211Q13398 564 aaPredicted RBP10.41□□□□□ -0.74
TOPBP1-206ENST00000508524 GRIK5Q16478 980 aa10.41□□□□□ -0.74
TOPBP1-206ENST00000508524 EDEM1Q92611 657 aa10.41□□□□□ -0.74
TOPBP1-206ENST00000508524 NSUN5Q96P11 429 aaKnown RBP10.41□□□□□ -0.74
TOPBP1-206ENST00000508524 SPATA31C1P0DKV0 1188 aa10.4□□□□□ -0.74
TOPBP1-206ENST00000508524 DNM1Q05193 864 aaKnown RBP10.4□□□□□ -0.74
TOPBP1-206ENST00000508524 SF3B2Q13435 895 aaKnown RBP10.4□□□□□ -0.74
TOPBP1-206ENST00000508524 ELMSAN1Q6PJG2 1045 aa10.4□□□□□ -0.74
TOPBP1-206ENST00000508524 ILDR2Q71H61 639 aa10.4□□□□□ -0.74
TOPBP1-206ENST00000508524 OR13H1Q8NG92 308 aa10.4□□□□□ -0.74
TOPBP1-206ENST00000508524 LOC102724428A0A0B4J2F2 783 aa10.39□□□□□ -0.75
TOPBP1-206ENST00000508524 FAM229AH3BQW9 127 aa10.39□□□□□ -0.75
TOPBP1-206ENST00000508524 J3QW42 95 aa10.39□□□□□ -0.75
TOPBP1-206ENST00000508524 ABL1P00519 1130 aa10.39□□□□□ -0.75
TOPBP1-206ENST00000508524 PROCP04070 461 aa10.39□□□□□ -0.75
TOPBP1-206ENST00000508524 PDGFAP04085 211 aa10.39□□□□□ -0.75
TOPBP1-206ENST00000508524 EIF2AK2P19525 551 aaKnown RBP10.39□□□□□ -0.75
TOPBP1-206ENST00000508524 SIK1P57059 783 aa10.39□□□□□ -0.75
TOPBP1-206ENST00000508524 PDE12Q6L8Q7 609 aaKnown RBP10.39□□□□□ -0.75
TOPBP1-206ENST00000508524 SPOCK3Q9BQ16 436 aa10.39□□□□□ -0.75
TOPBP1-206ENST00000508524 SMG9Q9H0W8 520 aaKnown RBP10.39□□□□□ -0.75
TOPBP1-206ENST00000508524 ANO2Q9NQ90 1003 aa10.39□□□□□ -0.75
TOPBP1-206ENST00000508524 MZF1P28698 734 aaPredicted RBP10.38□□□□□ -0.75
TOPBP1-206ENST00000508524 CHRNA4P43681 627 aa10.38□□□□□ -0.75
TOPBP1-206ENST00000508524 FKBP4Q02790 459 aaKnown RBP eCLIP10.38□□□□□ -0.75
TOPBP1-206ENST00000508524 PRRT3Q5FWE3 981 aa10.38□□□□□ -0.75
TOPBP1-206ENST00000508524 CD163Q86VB7 1156 aa10.38□□□□□ -0.75
TOPBP1-206ENST00000508524 TTC9Q92623 222 aa10.38□□□□□ -0.75
TOPBP1-206ENST00000508524 ABI2Q9NYB9 513 aaPredicted RBP10.38□□□□□ -0.75
TOPBP1-206ENST00000508524 C1QTNF9BB2RNN3 333 aa10.37□□□□□ -0.75
TOPBP1-206ENST00000508524 MSTNO14793 375 aa10.37□□□□□ -0.75
TOPBP1-206ENST00000508524 FAM13AO94988 1023 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms