RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 ARID3AQ99856 593 aa10.52□□□□□ -0.73
SH3D19-208ENST00000508492 MTFR1LQ9H019 292 aa10.52□□□□□ -0.73
SH3D19-208ENST00000508492 PCDHGC3Q9UN70 934 aa10.52□□□□□ -0.73
SH3D19-208ENST00000508492 CICQ96RK0 1608 aaPredicted RBP10.51□□□□□ -0.73
SH3D19-208ENST00000508492 FUT2Q10981 343 aa10.51□□□□□ -0.73
SH3D19-208ENST00000508492 ITPK1Q13572 414 aa10.51□□□□□ -0.73
SH3D19-208ENST00000508492 MSL1Q68DK7 614 aa10.51□□□□□ -0.73
SH3D19-208ENST00000508492 COL23A1Q86Y22 540 aaPredicted RBP10.51□□□□□ -0.73
SH3D19-208ENST00000508492 TMOD3Q9NYL9 352 aa10.51□□□□□ -0.73
SH3D19-208ENST00000508492 TFCP2L1Q9NZI6 479 aa10.51□□□□□ -0.73
SH3D19-208ENST00000508492 NPC1L1Q9UHC9 1359 aa10.51□□□□□ -0.73
SH3D19-208ENST00000508492 ATP6V1AP38606 617 aa10.5□□□□□ -0.73
SH3D19-208ENST00000508492 LINC00116Q8NCU8 138 aa10.5□□□□□ -0.73
SH3D19-208ENST00000508492 HELBQ8NG08 1087 aaPredicted RBP10.5□□□□□ -0.73
SH3D19-208ENST00000508492 LRCH3Q96II8 777 aa10.5□□□□□ -0.73
SH3D19-208ENST00000508492 SLC4A9Q96Q91 983 aa10.5□□□□□ -0.73
SH3D19-208ENST00000508492 PRR14Q9BWN1 585 aa10.5□□□□□ -0.73
SH3D19-208ENST00000508492 FHDC1Q9C0D6 1143 aaPredicted RBP10.5□□□□□ -0.73
SH3D19-208ENST00000508492 ATG3Q9NT62 314 aa10.5□□□□□ -0.73
SH3D19-208ENST00000508492 MRC1P22897 1456 aa10.49□□□□□ -0.73
SH3D19-208ENST00000508492 LSM11P83369 360 aaKnown RBP eCLIP10.49□□□□□ -0.73
SH3D19-208ENST00000508492 GUCA2AQ02747 115 aa10.49□□□□□ -0.73
SH3D19-208ENST00000508492 PLEKHO1Q53GL0 409 aaPredicted RBP10.49□□□□□ -0.73
SH3D19-208ENST00000508492 KIAA1551Q9HCM1 1747 aa10.49□□□□□ -0.73
SH3D19-208ENST00000508492 N4BP2Q86UW6 1770 aaPredicted RBP10.49□□□□□ -0.73
SH3D19-208ENST00000508492 LOC102724428A0A0B4J2F2 783 aa10.48□□□□□ -0.73
SH3D19-208ENST00000508492 SIK1P57059 783 aa10.48□□□□□ -0.73
SH3D19-208ENST00000508492 ADGRD1Q6QNK2 874 aa10.48□□□□□ -0.73
SH3D19-208ENST00000508492 CCDC82Q8N4S0 544 aa10.48□□□□□ -0.73
SH3D19-208ENST00000508492 HLA-CQ95604 372 aa10.48□□□□□ -0.73
SH3D19-208ENST00000508492 GDPD2Q9HCC8 539 aa10.48□□□□□ -0.73
SH3D19-208ENST00000508492 ZNF330Q9Y3S2 320 aaPredicted RBP10.48□□□□□ -0.73
SH3D19-208ENST00000508492 PLEKHG2Q9H7P9 1386 aa10.48□□□□□ -0.73
SH3D19-208ENST00000508492 KIF13BQ9NQT8 1826 aa10.47□□□□□ -0.73
SH3D19-208ENST00000508492 DIAPH1O60610 1272 aaKnown RBP10.47□□□□□ -0.73
SH3D19-208ENST00000508492 SMARCC1Q92922 1105 aaPredicted RBP10.47□□□□□ -0.73
SH3D19-208ENST00000508492 SYT17Q9BSW7 474 aa10.47□□□□□ -0.73
SH3D19-208ENST00000508492 LGR6Q9HBX8 967 aa10.47□□□□□ -0.73
SH3D19-208ENST00000508492 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.47□□□□□ -0.73
SH3D19-208ENST00000508492 KCPQ6ZWJ8 1503 aa10.47□□□□□ -0.73
SH3D19-208ENST00000508492 C6orf229H3BNL8 230 aa10.46□□□□□ -0.73
SH3D19-208ENST00000508492 MTHFSDQ2M296 383 aaKnown RBP10.46□□□□□ -0.73
SH3D19-208ENST00000508492 AMOTQ4VCS5 1084 aa10.46□□□□□ -0.73
SH3D19-208ENST00000508492 C1orf141Q5JVX7 400 aa10.46□□□□□ -0.73
SH3D19-208ENST00000508492 CCDC97Q96F63 343 aaPredicted RBP10.46□□□□□ -0.73
SH3D19-208ENST00000508492 DCAF5Q96JK2 942 aa10.46□□□□□ -0.73
SH3D19-208ENST00000508492 SERPINA10Q9UK55 444 aa10.46□□□□□ -0.73
SH3D19-208ENST00000508492 NDUFB9Q9Y6M9 179 aa10.46□□□□□ -0.73
SH3D19-208ENST00000508492 BRCA1P38398 1863 aaKnown RBP10.45□□□□□ -0.74
SH3D19-208ENST00000508492 AFDNP55196 1824 aaKnown RBP10.45□□□□□ -0.74
SH3D19-208ENST00000508492 ERVV-2B6SEH9 535 aa10.45□□□□□ -0.74
SH3D19-208ENST00000508492 U2SURPO15042 1029 aaKnown RBP10.45□□□□□ -0.74
SH3D19-208ENST00000508492 ACTN4O43707 911 aaKnown RBP10.45□□□□□ -0.74
SH3D19-208ENST00000508492 PPP2R1AP30153 589 aa10.45□□□□□ -0.74
SH3D19-208ENST00000508492 CABP4P57796 275 aa10.45□□□□□ -0.74
SH3D19-208ENST00000508492 NFATC2IPQ8NCF5 419 aa10.45□□□□□ -0.74
SH3D19-208ENST00000508492 ANKK1Q8NFD2 765 aa10.45□□□□□ -0.74
SH3D19-208ENST00000508492 NLGN2Q8NFZ4 835 aa10.45□□□□□ -0.74
SH3D19-208ENST00000508492 PTCD1O75127 700 aaKnown RBP10.44□□□□□ -0.74
SH3D19-208ENST00000508492 HSP90AB1P08238 724 aaKnown RBP10.44□□□□□ -0.74
SH3D19-208ENST00000508492 ABL2P42684 1182 aa10.44□□□□□ -0.74
SH3D19-208ENST00000508492 Q3C1V9 767 aa10.44□□□□□ -0.74
SH3D19-208ENST00000508492 SLC16A10Q8TF71 515 aa10.44□□□□□ -0.74
SH3D19-208ENST00000508492 TBC1D2BQ9UPU7 963 aa10.44□□□□□ -0.74
SH3D19-208ENST00000508492 RNMTO43148 476 aaKnown RBP10.43□□□□□ -0.74
SH3D19-208ENST00000508492 HRO43593 1189 aa10.43□□□□□ -0.74
SH3D19-208ENST00000508492 SLC39A6Q13433 755 aa10.43□□□□□ -0.74
SH3D19-208ENST00000508492 AKAP4Q5JQC9 854 aa10.43□□□□□ -0.74
SH3D19-208ENST00000508492 MAP3K5Q99683 1374 aa10.42□□□□□ -0.74
SH3D19-208ENST00000508492 GOLGA8CPA6NN73 597 aa10.42□□□□□ -0.74
SH3D19-208ENST00000508492 CFAP99D6REC4 459 aa10.42□□□□□ -0.74
SH3D19-208ENST00000508492 CTDSPL2Q05D32 466 aa10.42□□□□□ -0.74
SH3D19-208ENST00000508492 MORN1Q5T089 497 aa10.42□□□□□ -0.74
SH3D19-208ENST00000508492 TSC1Q92574 1164 aa10.42□□□□□ -0.74
SH3D19-208ENST00000508492 PHACTR3Q96KR7 559 aa10.42□□□□□ -0.74
SH3D19-208ENST00000508492 KDM3BQ7LBC6 1761 aa10.42□□□□□ -0.74
SH3D19-208ENST00000508492 UTRNP46939 3433 aa10.41□□□□□ -0.74
SH3D19-208ENST00000508492 CACNA1SQ13698 1873 aa10.41□□□□□ -0.74
SH3D19-208ENST00000508492 POLD1P28340 1107 aa10.41□□□□□ -0.74
SH3D19-208ENST00000508492 PRKAR2BP31323 418 aa10.41□□□□□ -0.74
SH3D19-208ENST00000508492 RETREG3Q86VR2 466 aa10.41□□□□□ -0.74
SH3D19-208ENST00000508492 SLC52A2Q9HAB3 445 aa10.41□□□□□ -0.74
SH3D19-208ENST00000508492 SSFA2P28290 1259 aa10.4□□□□□ -0.74
SH3D19-208ENST00000508492 DNAJC10Q8IXB1 793 aa10.4□□□□□ -0.74
SH3D19-208ENST00000508492 IL17REQ8NFR9 667 aa10.4□□□□□ -0.74
SH3D19-208ENST00000508492 PRR7Q8TB68 274 aa10.4□□□□□ -0.74
SH3D19-208ENST00000508492 WWC3Q9ULE0 1092 aa10.4□□□□□ -0.74
SH3D19-208ENST00000508492 SCN7AQ01118 1682 aa10.4□□□□□ -0.74
SH3D19-208ENST00000508492 LAMB4A4D0S4 1761 aa10.39□□□□□ -0.75
SH3D19-208ENST00000508492 BCORQ6W2J9 1755 aa10.39□□□□□ -0.75
SH3D19-208ENST00000508492 CNTNAP4Q9C0A0 1308 aa10.39□□□□□ -0.75
SH3D19-208ENST00000508492 SOWAHBA6NEL2 793 aa10.39□□□□□ -0.75
SH3D19-208ENST00000508492 CRKLP46109 303 aaKnown RBP10.39□□□□□ -0.75
SH3D19-208ENST00000508492 ANKRD31Q8N7Z5 1873 aa10.38□□□□□ -0.75
SH3D19-208ENST00000508492 YBX3P16989 372 aaKnown RBP eCLIP10.38□□□□□ -0.75
SH3D19-208ENST00000508492 YY1P25490 414 aa10.38□□□□□ -0.75
SH3D19-208ENST00000508492 PPP4CP60510 307 aa10.38□□□□□ -0.75
SH3D19-208ENST00000508492 DDX10Q13206 875 aaKnown RBP10.38□□□□□ -0.75
SH3D19-208ENST00000508492 WASHC4Q2M389 1173 aa10.38□□□□□ -0.75
SH3D19-208ENST00000508492 DESI1Q6ICB0 168 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms