RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 NLRP3Q96P20 1036 aa13.37□□□□□ -0.27
TRIM6-209ENST00000507320 COL4A1P02462 1669 aa13.36□□□□□ -0.27
TRIM6-209ENST00000507320 KLRG2A4D1S0 409 aaPredicted RBP13.36□□□□□ -0.27
TRIM6-209ENST00000507320 CSF1RP07333 972 aa13.36□□□□□ -0.27
TRIM6-209ENST00000507320 PPP1R1BQ9UD71 204 aaPredicted RBP13.36□□□□□ -0.27
TRIM6-209ENST00000507320 NEFLP07196 543 aa13.35□□□□□ -0.27
TRIM6-209ENST00000507320 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
TRIM6-209ENST00000507320 FAM161AQ3B820 660 aa13.35□□□□□ -0.27
TRIM6-209ENST00000507320 CRY2Q49AN0 593 aa13.35□□□□□ -0.27
TRIM6-209ENST00000507320 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
TRIM6-209ENST00000507320 GREM2Q9H772 168 aa13.35□□□□□ -0.27
TRIM6-209ENST00000507320 PCDHB15Q9Y5E8 787 aa13.35□□□□□ -0.27
TRIM6-209ENST00000507320 KIAA1551Q9HCM1 1747 aa13.35□□□□□ -0.27
TRIM6-209ENST00000507320 PNMA6EA0A0J9YXQ4 647 aa13.35□□□□□ -0.27
TRIM6-209ENST00000507320 CHRNA5P30532 468 aa13.35□□□□□ -0.27
TRIM6-209ENST00000507320 CEP85Q6P2H3 762 aa13.35□□□□□ -0.27
TRIM6-209ENST00000507320 SIRT2Q8IXJ6 389 aa13.35□□□□□ -0.27
TRIM6-209ENST00000507320 CHMP4BQ9H444 224 aaKnown RBP13.35□□□□□ -0.27
TRIM6-209ENST00000507320 HSP90B1P14625 803 aaKnown RBP13.34□□□□□ -0.27
TRIM6-209ENST00000507320 PDE6BP35913 854 aa13.34□□□□□ -0.27
TRIM6-209ENST00000507320 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
TRIM6-209ENST00000507320 SEC31BQ9NQW1 1179 aa13.34□□□□□ -0.27
TRIM6-209ENST00000507320 CHMP3Q9Y3E7 222 aa13.34□□□□□ -0.27
TRIM6-209ENST00000507320 UTRNP46939 3433 aa13.33□□□□□ -0.28
TRIM6-209ENST00000507320 SRGNP10124 158 aa13.33□□□□□ -0.28
TRIM6-209ENST00000507320 MTX1Q13505 466 aa13.33□□□□□ -0.28
TRIM6-209ENST00000507320 CCDC152Q4G0S7 254 aa13.33□□□□□ -0.28
TRIM6-209ENST00000507320 HDAC5Q9UQL6 1122 aa13.33□□□□□ -0.28
TRIM6-209ENST00000507320 A0A0G2JLW4 131 aa13.32□□□□□ -0.28
TRIM6-209ENST00000507320 SRGAP3O43295 1099 aa13.32□□□□□ -0.28
TRIM6-209ENST00000507320 ITGA6P23229 1130 aa13.32□□□□□ -0.28
TRIM6-209ENST00000507320 C2CD5Q86YS7 1000 aa13.32□□□□□ -0.28
TRIM6-209ENST00000507320 KLHDC4Q8TBB5 520 aa13.32□□□□□ -0.28
TRIM6-209ENST00000507320 FHDC1Q9C0D6 1143 aaPredicted RBP13.32□□□□□ -0.28
TRIM6-209ENST00000507320 CD2APQ9Y5K6 639 aa13.32□□□□□ -0.28
TRIM6-209ENST00000507320 CACNA1SQ13698 1873 aa13.32□□□□□ -0.28
TRIM6-209ENST00000507320 DPEP1P16444 411 aa13.32□□□□□ -0.28
TRIM6-209ENST00000507320 KCNA3P22001 575 aa13.32□□□□□ -0.28
TRIM6-209ENST00000507320 ATP8B2P98198 1209 aa13.32□□□□□ -0.28
TRIM6-209ENST00000507320 NLGN2Q8NFZ4 835 aa13.32□□□□□ -0.28
TRIM6-209ENST00000507320 DLEC1Q9Y238 1755 aa13.32□□□□□ -0.28
TRIM6-209ENST00000507320 LRP5O75197 1615 aa13.31□□□□□ -0.28
TRIM6-209ENST00000507320 H0YIN7 160 aa13.31□□□□□ -0.28
TRIM6-209ENST00000507320 RFX5P48382 616 aaPredicted RBP13.31□□□□□ -0.28
TRIM6-209ENST00000507320 SLC51AQ86UW1 340 aa13.31□□□□□ -0.28
TRIM6-209ENST00000507320 RPGRQ92834 1020 aaKnown RBP13.31□□□□□ -0.28
TRIM6-209ENST00000507320 CELF1Q92879 486 aaKnown RBP13.31□□□□□ -0.28
TRIM6-209ENST00000507320 ZNF594Q96JF6 807 aaPredicted RBP13.31□□□□□ -0.28
TRIM6-209ENST00000507320 SPEF2Q9C093 1822 aa13.31□□□□□ -0.28
TRIM6-209ENST00000507320 RTL9Q8NET4 1388 aa13.31□□□□□ -0.28
TRIM6-209ENST00000507320 NPR1P16066 1061 aa13.3□□□□□ -0.28
TRIM6-209ENST00000507320 HOXA10P31260 410 aaPredicted RBP13.3□□□□□ -0.28
TRIM6-209ENST00000507320 AAMPQ13685 434 aa13.3□□□□□ -0.28
TRIM6-209ENST00000507320 POLA2Q14181 598 aa13.3□□□□□ -0.28
TRIM6-209ENST00000507320 CCDC57Q2TAC2 916 aa13.3□□□□□ -0.28
TRIM6-209ENST00000507320 RPAP2Q8IXW5 612 aaPredicted RBP13.3□□□□□ -0.28
TRIM6-209ENST00000507320 SSH3Q8TE77 659 aa13.3□□□□□ -0.28
TRIM6-209ENST00000507320 MASTLQ96GX5 879 aa13.3□□□□□ -0.28
TRIM6-209ENST00000507320 WWC3Q9ULE0 1092 aa13.3□□□□□ -0.28
TRIM6-209ENST00000507320 PA2G4Q9UQ80 394 aaKnown RBP13.3□□□□□ -0.28
TRIM6-209ENST00000507320 BRCA1P38398 1863 aaKnown RBP13.3□□□□□ -0.28
TRIM6-209ENST00000507320 TGFB2P61812 414 aa13.3□□□□□ -0.28
TRIM6-209ENST00000507320 PTPN12Q05209 780 aaKnown RBP13.3□□□□□ -0.28
TRIM6-209ENST00000507320 IFIT5Q13325 482 aaKnown RBP13.3□□□□□ -0.28
TRIM6-209ENST00000507320 DDX46Q7L014 1031 aaKnown RBP13.3□□□□□ -0.28
TRIM6-209ENST00000507320 ZNF622Q969S3 477 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRIM6-209ENST00000507320 SLX4Q8IY92 1834 aa13.29□□□□□ -0.28
TRIM6-209ENST00000507320 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
TRIM6-209ENST00000507320 RBM17Q96I25 401 aaKnown RBP13.29□□□□□ -0.28
TRIM6-209ENST00000507320 SYT17Q9BSW7 474 aa13.29□□□□□ -0.28
TRIM6-209ENST00000507320 GRAPQ13588 217 aa13.28□□□□□ -0.28
TRIM6-209ENST00000507320 GRAPLQ8TC17 118 aaPredicted RBP13.28□□□□□ -0.28
TRIM6-209ENST00000507320 CRAMP1Q96RY5 1269 aa13.28□□□□□ -0.28
TRIM6-209ENST00000507320 PUS3Q9BZE2 481 aaKnown RBP13.28□□□□□ -0.28
TRIM6-209ENST00000507320 EIF5BO60841 1220 aaKnown RBP13.27□□□□□ -0.28
TRIM6-209ENST00000507320 RPS8P62241 208 aaKnown RBP13.27□□□□□ -0.28
TRIM6-209ENST00000507320 STYK1Q6J9G0 422 aa13.27□□□□□ -0.28
TRIM6-209ENST00000507320 CDC5LQ99459 802 aaKnown RBP13.27□□□□□ -0.28
TRIM6-209ENST00000507320 SIL1Q9H173 461 aa13.27□□□□□ -0.28
TRIM6-209ENST00000507320 PDZRN3Q9UPQ7 1066 aa13.27□□□□□ -0.28
TRIM6-209ENST00000507320 IGHDP01880 384 aa13.27□□□□□ -0.29
TRIM6-209ENST00000507320 LRRC24Q50LG9 513 aa13.27□□□□□ -0.29
TRIM6-209ENST00000507320 TAF7LQ5H9L4 462 aa13.27□□□□□ -0.29
TRIM6-209ENST00000507320 PRPF40BQ6NWY9 871 aaKnown RBP13.27□□□□□ -0.29
TRIM6-209ENST00000507320 OLFM4Q6UX06 510 aa13.27□□□□□ -0.29
TRIM6-209ENST00000507320 ANKRD18AQ8IVF6 992 aa13.27□□□□□ -0.29
TRIM6-209ENST00000507320 COPRSQ9NQ92 184 aa13.27□□□□□ -0.29
TRIM6-209ENST00000507320 ALDH1B1P30837 517 aa13.26□□□□□ -0.29
TRIM6-209ENST00000507320 HMMRO75330 724 aa13.25□□□□□ -0.29
TRIM6-209ENST00000507320 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
TRIM6-209ENST00000507320 HDAC1Q13547 482 aaPredicted RBP13.25□□□□□ -0.29
TRIM6-209ENST00000507320 LDHAL6AQ6ZMR3 332 aa13.25□□□□□ -0.29
TRIM6-209ENST00000507320 ATG9AQ7Z3C6 839 aa13.25□□□□□ -0.29
TRIM6-209ENST00000507320 CNKSR1Q969H4 720 aa13.25□□□□□ -0.29
TRIM6-209ENST00000507320 PIM2Q9P1W9 311 aa13.25□□□□□ -0.29
TRIM6-209ENST00000507320 EXOC6BQ9Y2D4 811 aa13.25□□□□□ -0.29
TRIM6-209ENST00000507320 SURF6O75683 361 aaKnown RBP13.25□□□□□ -0.29
TRIM6-209ENST00000507320 TTLL6Q8N841 843 aa13.25□□□□□ -0.29
TRIM6-209ENST00000507320 MPHOSPH8Q99549 860 aa13.25□□□□□ -0.29
TRIM6-209ENST00000507320 BSDC1Q9NW68 430 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms