RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 PRDM11Q9NQV5 511 aa9.9□□□□□ -0.82
NR1I3-224ENST00000507215 POGKQ9P215 609 aa9.9□□□□□ -0.82
NR1I3-224ENST00000507215 AXIN1O15169 862 aa9.89□□□□□ -0.83
NR1I3-224ENST00000507215 CTC1Q2NKJ3 1217 aa9.89□□□□□ -0.83
NR1I3-224ENST00000507215 PLPP7Q8NBV4 271 aa9.89□□□□□ -0.83
NR1I3-224ENST00000507215 PRAM1Q96QH2 718 aa9.89□□□□□ -0.83
NR1I3-224ENST00000507215 SPATA31A1Q5TZJ5 1347 aa9.88□□□□□ -0.83
NR1I3-224ENST00000507215 TULP4Q9NRJ4 1543 aa9.88□□□□□ -0.83
NR1I3-224ENST00000507215 ATP7BP35670 1465 aa9.88□□□□□ -0.83
NR1I3-224ENST00000507215 BMP1P13497 986 aa9.88□□□□□ -0.83
NR1I3-224ENST00000507215 TRIM46Q7Z4K8 759 aa9.88□□□□□ -0.83
NR1I3-224ENST00000507215 KDF1Q8NAX2 398 aaPredicted RBP9.88□□□□□ -0.83
NR1I3-224ENST00000507215 SPON1Q9HCB6 807 aa9.88□□□□□ -0.83
NR1I3-224ENST00000507215 APBA3O96018 575 aa9.87□□□□□ -0.83
NR1I3-224ENST00000507215 SKIP12755 728 aa9.87□□□□□ -0.83
NR1I3-224ENST00000507215 ERVK-9P63128 1117 aa9.87□□□□□ -0.83
NR1I3-224ENST00000507215 PDE3BQ13370 1112 aa9.87□□□□□ -0.83
NR1I3-224ENST00000507215 EZH2Q15910 746 aaKnown RBP9.87□□□□□ -0.83
NR1I3-224ENST00000507215 Q6ZVU0 165 aa9.87□□□□□ -0.83
NR1I3-224ENST00000507215 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
NR1I3-224ENST00000507215 PPP1R1BQ9UD71 204 aaPredicted RBP9.87□□□□□ -0.83
NR1I3-224ENST00000507215 THRAP3Q9Y2W1 955 aaKnown RBP9.87□□□□□ -0.83
NR1I3-224ENST00000507215 RREB1Q92766 1687 aa9.87□□□□□ -0.83
NR1I3-224ENST00000507215 TRIM37O94972 964 aa9.86□□□□□ -0.83
NR1I3-224ENST00000507215 ITSN1Q15811 1721 aa9.86□□□□□ -0.83
NR1I3-224ENST00000507215 DEPDC4Q8N2C3 294 aa9.86□□□□□ -0.83
NR1I3-224ENST00000507215 MEIOBQ8N635 442 aa9.86□□□□□ -0.83
NR1I3-224ENST00000507215 NGDNQ8NEJ9 315 aaKnown RBP9.86□□□□□ -0.83
NR1I3-224ENST00000507215 PMFBP1Q8TBY8 1022 aa9.86□□□□□ -0.83
NR1I3-224ENST00000507215 AGBL1Q96MI9 1066 aa9.86□□□□□ -0.83
NR1I3-224ENST00000507215 MPHOSPH9Q99550 1183 aa9.86□□□□□ -0.83
NR1I3-224ENST00000507215 TFIP11Q9UBB9 837 aaKnown RBP9.86□□□□□ -0.83
NR1I3-224ENST00000507215 DOLKQ9UPQ8 538 aa9.86□□□□□ -0.83
NR1I3-224ENST00000507215 CRYBG1Q9Y4K1 1723 aa9.86□□□□□ -0.83
NR1I3-224ENST00000507215 OXLD1Q5BKU9 147 aa9.85□□□□□ -0.83
NR1I3-224ENST00000507215 PPP1R12CQ9BZL4 782 aa9.85□□□□□ -0.83
NR1I3-224ENST00000507215 OSBPL3Q9H4L5 887 aa9.85□□□□□ -0.83
NR1I3-224ENST00000507215 RGPD3A6NKT7 1758 aaPredicted RBP9.85□□□□□ -0.83
NR1I3-224ENST00000507215 RGPD4Q7Z3J3 1758 aa9.85□□□□□ -0.83
NR1I3-224ENST00000507215 PALM3A6NDB9 673 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-224ENST00000507215 USP17L5A8MUK1 530 aa9.84□□□□□ -0.83
NR1I3-224ENST00000507215 WASLO00401 505 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-224ENST00000507215 KCNQ2O43526 872 aa9.84□□□□□ -0.83
NR1I3-224ENST00000507215 CFAP70Q5T0N1 1121 aa9.84□□□□□ -0.83
NR1I3-224ENST00000507215 CC2D2BQ6DHV5 1058 aa9.84□□□□□ -0.83
NR1I3-224ENST00000507215 ERICH6Q7L0X2 663 aa9.84□□□□□ -0.83
NR1I3-224ENST00000507215 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
NR1I3-224ENST00000507215 NUP188Q5SRE5 1749 aa9.83□□□□□ -0.84
NR1I3-224ENST00000507215 POTECB2RU33 542 aa9.83□□□□□ -0.84
NR1I3-224ENST00000507215 ATP9BO43861 1147 aa9.83□□□□□ -0.84
NR1I3-224ENST00000507215 EVA1CP58658 441 aa9.83□□□□□ -0.84
NR1I3-224ENST00000507215 NCOA4Q13772 614 aa9.83□□□□□ -0.84
NR1I3-224ENST00000507215 TCP11L2Q8N4U5 519 aa9.83□□□□□ -0.84
NR1I3-224ENST00000507215 ATP13A2Q9NQ11 1180 aa9.83□□□□□ -0.84
NR1I3-224ENST00000507215 CPDO75976 1380 aa9.83□□□□□ -0.84
NR1I3-224ENST00000507215 KIAA0232Q92628 1395 aa9.83□□□□□ -0.84
NR1I3-224ENST00000507215 SSH2Q76I76 1423 aa9.82□□□□□ -0.84
NR1I3-224ENST00000507215 STAU1O95793 577 aaKnown RBP9.82□□□□□ -0.84
NR1I3-224ENST00000507215 SAFB2Q14151 953 aaKnown RBP eCLIP9.82□□□□□ -0.84
NR1I3-224ENST00000507215 MAP7D1Q3KQU3 841 aa9.82□□□□□ -0.84
NR1I3-224ENST00000507215 FAM182BQ5T319 152 aa9.82□□□□□ -0.84
NR1I3-224ENST00000507215 MRPL14Q6P1L8 145 aaKnown RBP9.82□□□□□ -0.84
NR1I3-224ENST00000507215 MAFBQ9Y5Q3 323 aaPredicted RBP9.82□□□□□ -0.84
NR1I3-224ENST00000507215 ADGRB1O14514 1584 aa9.82□□□□□ -0.84
NR1I3-224ENST00000507215 BRD4O60885 1362 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-224ENST00000507215 PLSCR1O15162 318 aa9.81□□□□□ -0.84
NR1I3-224ENST00000507215 ADH1AP07327 375 aa9.81□□□□□ -0.84
NR1I3-224ENST00000507215 STRN4Q9NRL3 753 aa9.81□□□□□ -0.84
NR1I3-224ENST00000507215 PHRF1Q9P1Y6 1649 aaKnown RBP9.81□□□□□ -0.84
NR1I3-224ENST00000507215 OVOS2A0A0G2JMS6 1433 aa9.81□□□□□ -0.84
NR1I3-224ENST00000507215 OVOS2A0A0J9YW53 1432 aa9.81□□□□□ -0.84
NR1I3-224ENST00000507215 OVOS2Q6IE36 1432 aa9.81□□□□□ -0.84
NR1I3-224ENST00000507215 PARP4Q9UKK3 1724 aaKnown RBP9.8□□□□□ -0.84
NR1I3-224ENST00000507215 USP17L3A6NCW0 530 aa9.8□□□□□ -0.84
NR1I3-224ENST00000507215 USP17L4A6NCW7 530 aa9.8□□□□□ -0.84
NR1I3-224ENST00000507215 RELBQ01201 579 aa9.8□□□□□ -0.84
NR1I3-224ENST00000507215 USP17L2Q6R6M4 530 aa9.8□□□□□ -0.84
NR1I3-224ENST00000507215 USP17L1Q7RTZ2 530 aa9.8□□□□□ -0.84
NR1I3-224ENST00000507215 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
NR1I3-224ENST00000507215 PURBQ96QR8 312 aaKnown RBP9.8□□□□□ -0.84
NR1I3-224ENST00000507215 GMPR2Q9P2T1 348 aaKnown RBP9.8□□□□□ -0.84
NR1I3-224ENST00000507215 PRR36Q9H6K5 1346 aa9.8□□□□□ -0.84
NR1I3-224ENST00000507215 POLR3AO14802 1390 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-224ENST00000507215 C6orf118Q5T5N4 469 aa9.79□□□□□ -0.84
NR1I3-224ENST00000507215 PLEKHM2Q8IWE5 1019 aa9.79□□□□□ -0.84
NR1I3-224ENST00000507215 CCDC82Q8N4S0 544 aa9.79□□□□□ -0.84
NR1I3-224ENST00000507215 ZFP42Q96MM3 310 aa9.79□□□□□ -0.84
NR1I3-224ENST00000507215 ZNF395Q9H8N7 513 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-224ENST00000507215 PTGIRP43119 386 aa9.78□□□□□ -0.84
NR1I3-224ENST00000507215 USP4Q13107 963 aa9.78□□□□□ -0.84
NR1I3-224ENST00000507215 NUDT16Q96DE0 195 aaKnown RBP9.78□□□□□ -0.84
NR1I3-224ENST00000507215 HIRIP3Q9BW71 556 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-224ENST00000507215 USP35Q9P2H5 1018 aa9.78□□□□□ -0.84
NR1I3-224ENST00000507215 TRAK1Q9UPV9 953 aa9.78□□□□□ -0.84
NR1I3-224ENST00000507215 PCDHGA11Q9Y5H2 935 aa9.78□□□□□ -0.84
NR1I3-224ENST00000507215 BCL9O00512 1426 aa9.78□□□□□ -0.84
NR1I3-224ENST00000507215 LMOD1P29536 600 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-224ENST00000507215 CHRNA2Q15822 529 aa9.77□□□□□ -0.85
NR1I3-224ENST00000507215 NLRP13Q86W25 1043 aa9.77□□□□□ -0.85
NR1I3-224ENST00000507215 PPARGC1BQ86YN6 1023 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms