RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 AMPD1P23109 780 aa12.08□□□□□ -0.48
PFDN1-202ENST00000507185 SEC13P55735 322 aa12.08□□□□□ -0.48
PFDN1-202ENST00000507185 RHPN1Q8TCX5 695 aa12.08□□□□□ -0.48
PFDN1-202ENST00000507185 MARK1Q9P0L2 795 aa12.08□□□□□ -0.48
PFDN1-202ENST00000507185 HCN2Q9UL51 889 aa12.08□□□□□ -0.48
PFDN1-202ENST00000507185 PPP1R12BO60237 982 aaPredicted RBP12.07□□□□□ -0.48
PFDN1-202ENST00000507185 LMOD1P29536 600 aaPredicted RBP12.07□□□□□ -0.48
PFDN1-202ENST00000507185 SNRPNP63162 240 aaKnown RBP12.07□□□□□ -0.48
PFDN1-202ENST00000507185 ZNF777Q9ULD5 760 aaPredicted RBP12.07□□□□□ -0.48
PFDN1-202ENST00000507185 PRR12Q9ULL5 1215 aa12.07□□□□□ -0.48
PFDN1-202ENST00000507185 HCN4Q9Y3Q4 1203 aa12.07□□□□□ -0.48
PFDN1-202ENST00000507185 FMN1Q68DA7 1419 aa12.06□□□□□ -0.48
PFDN1-202ENST00000507185 LAMC2Q13753 1193 aa12.06□□□□□ -0.48
PFDN1-202ENST00000507185 C1orf53Q5VUE5 145 aa12.06□□□□□ -0.48
PFDN1-202ENST00000507185 PTPRTO14522 1441 aa12.05□□□□□ -0.48
PFDN1-202ENST00000507185 EFSO43281 561 aa12.05□□□□□ -0.48
PFDN1-202ENST00000507185 EPXP11678 715 aa12.05□□□□□ -0.48
PFDN1-202ENST00000507185 ADH6P28332 368 aa12.05□□□□□ -0.48
PFDN1-202ENST00000507185 HIRAP54198 1017 aaPredicted RBP12.05□□□□□ -0.48
PFDN1-202ENST00000507185 C7orf43Q8WVR3 580 aa12.05□□□□□ -0.48
PFDN1-202ENST00000507185 VRTNQ9H8Y1 702 aa12.05□□□□□ -0.48
PFDN1-202ENST00000507185 AVENQ9NQS1 362 aaPredicted RBP12.05□□□□□ -0.48
PFDN1-202ENST00000507185 MKL2Q9ULH7 1088 aa12.05□□□□□ -0.48
PFDN1-202ENST00000507185 TROQ12816 1431 aaPredicted RBP12.04□□□□□ -0.48
PFDN1-202ENST00000507185 TRAPPC8Q9Y2L5 1435 aa12.04□□□□□ -0.48
PFDN1-202ENST00000507185 CRTC2Q53ET0 693 aaPredicted RBP12.04□□□□□ -0.48
PFDN1-202ENST00000507185 KANK4Q5T7N3 995 aaPredicted RBP12.04□□□□□ -0.48
PFDN1-202ENST00000507185 HINFPQ9BQA5 517 aa12.04□□□□□ -0.48
PFDN1-202ENST00000507185 PHACTR1Q9C0D0 580 aa12.04□□□□□ -0.48
PFDN1-202ENST00000507185 STRN4Q9NRL3 753 aa12.04□□□□□ -0.48
PFDN1-202ENST00000507185 KIF14Q15058 1648 aa12.04□□□□□ -0.48
PFDN1-202ENST00000507185 ATAD2Q6PL18 1390 aa12.04□□□□□ -0.48
PFDN1-202ENST00000507185 PTK7Q13308 1070 aa12.03□□□□□ -0.48
PFDN1-202ENST00000507185 GPAT2Q6NUI2 795 aa12.03□□□□□ -0.48
PFDN1-202ENST00000507185 POTEAQ6S8J7 498 aa12.03□□□□□ -0.48
PFDN1-202ENST00000507185 BTBD6Q96KE9 485 aa12.03□□□□□ -0.48
PFDN1-202ENST00000507185 ANKIB1Q9P2G1 1089 aa12.03□□□□□ -0.48
PFDN1-202ENST00000507185 ZNF335Q9H4Z2 1342 aaPredicted RBP12.03□□□□□ -0.48
PFDN1-202ENST00000507185 C21orf2O43822 256 aa12.02□□□□□ -0.49
PFDN1-202ENST00000507185 PCBP4P57723 403 aaKnown RBP12.02□□□□□ -0.49
PFDN1-202ENST00000507185 DPYDQ12882 1025 aa12.02□□□□□ -0.49
PFDN1-202ENST00000507185 GAS2L2Q8NHY3 880 aa12.02□□□□□ -0.49
PFDN1-202ENST00000507185 SCG3Q8WXD2 468 aaKnown RBP12.02□□□□□ -0.49
PFDN1-202ENST00000507185 DCAF5Q96JK2 942 aa12.02□□□□□ -0.49
PFDN1-202ENST00000507185 ARID3AQ99856 593 aa12.02□□□□□ -0.49
PFDN1-202ENST00000507185 KLF15Q9UIH9 416 aa12.02□□□□□ -0.49
PFDN1-202ENST00000507185 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
PFDN1-202ENST00000507185 ZNF468Q5VIY5 522 aaPredicted RBP12.01□□□□□ -0.49
PFDN1-202ENST00000507185 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
PFDN1-202ENST00000507185 NCOA1Q15788 1441 aa12.01□□□□□ -0.49
PFDN1-202ENST00000507185 DIP2CQ9Y2E4 1556 aa12.01□□□□□ -0.49
PFDN1-202ENST00000507185 MYO5CQ9NQX4 1742 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 FAM196BA6NMK8 535 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 USP17L15C9J2P7 530 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 USP17L10C9JJH3 530 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 USP17L13C9JLJ4 530 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 USP17L12C9JPN9 530 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 USP17L11C9JVI0 530 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 USP17L21D6R901 530 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 USP17L18D6R9N7 530 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 USP17L22D6RA61 530 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 USP17L17D6RBQ6 530 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 USP17L19D6RCP7 530 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 USP17L20D6RJB6 530 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 USP17L24Q0WX57 530 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
PFDN1-202ENST00000507185 ANKMY2Q8IV38 441 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 STAG2Q8N3U4 1231 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 STRCQ7RTU9 1775 aa12□□□□□ -0.49
PFDN1-202ENST00000507185 FCHSD1Q86WN1 690 aa11.99□□□□□ -0.49
PFDN1-202ENST00000507185 ALDH16A1Q8IZ83 802 aa11.99□□□□□ -0.49
PFDN1-202ENST00000507185 HSH2DQ96JZ2 352 aa11.99□□□□□ -0.49
PFDN1-202ENST00000507185 C2orf49Q9BVC5 232 aaPredicted RBP11.99□□□□□ -0.49
PFDN1-202ENST00000507185 CNTLNQ9NXG0 1405 aa11.99□□□□□ -0.49
PFDN1-202ENST00000507185 ARHGAP35Q9NRY4 1499 aa11.99□□□□□ -0.49
PFDN1-202ENST00000507185 KDM5CP41229 1560 aa11.99□□□□□ -0.49
PFDN1-202ENST00000507185 SPAG9O60271 1321 aaKnown RBP11.98□□□□□ -0.49
PFDN1-202ENST00000507185 IGHA1P01876 353 aa11.98□□□□□ -0.49
PFDN1-202ENST00000507185 SFSWAPQ12872 951 aaKnown RBP11.98□□□□□ -0.49
PFDN1-202ENST00000507185 GGT6Q6P531 493 aa11.98□□□□□ -0.49
PFDN1-202ENST00000507185 CEP63Q96MT8 703 aa11.98□□□□□ -0.49
PFDN1-202ENST00000507185 ABCA6Q8N139 1617 aa11.97□□□□□ -0.49
PFDN1-202ENST00000507185 LTBP4Q8N2S1 1624 aa11.97□□□□□ -0.49
PFDN1-202ENST00000507185 MLH3Q9UHC1 1453 aa11.97□□□□□ -0.49
PFDN1-202ENST00000507185 ZMYM3Q14202 1370 aa11.97□□□□□ -0.49
PFDN1-202ENST00000507185 PIK3R2O00459 728 aa11.97□□□□□ -0.49
PFDN1-202ENST00000507185 CHSY3Q70JA7 882 aa11.97□□□□□ -0.49
PFDN1-202ENST00000507185 NGLY1Q96IV0 654 aa11.97□□□□□ -0.49
PFDN1-202ENST00000507185 SUSD3Q96L08 255 aa11.97□□□□□ -0.49
PFDN1-202ENST00000507185 CAMSAP1Q5T5Y3 1602 aa11.97□□□□□ -0.49
PFDN1-202ENST00000507185 LGR5O75473 907 aa11.96□□□□□ -0.49
PFDN1-202ENST00000507185 HOXB4P17483 251 aaPredicted RBP11.96□□□□□ -0.49
PFDN1-202ENST00000507185 HNRNPMP52272 730 aaKnown RBP eCLIP11.96□□□□□ -0.49
PFDN1-202ENST00000507185 LINC00114Q6XXX2 140 aa11.96□□□□□ -0.49
PFDN1-202ENST00000507185 SYT9Q86SS6 491 aa11.96□□□□□ -0.49
PFDN1-202ENST00000507185 C3P01024 1663 aa11.95□□□□□ -0.5
PFDN1-202ENST00000507185 CFAP70Q5T0N1 1121 aa11.95□□□□□ -0.5
PFDN1-202ENST00000507185 ZNF280CQ8ND82 737 aa11.95□□□□□ -0.5
PFDN1-202ENST00000507185 BRD7Q9NPI1 651 aa11.95□□□□□ -0.5
PFDN1-202ENST00000507185 GNB5O14775 395 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms