RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 ADAMTSL1Q8N6G6 1762 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 RASSF10A6NK89 507 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 NBPF26B4DH59 902 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 U2AF1L5P0DN76 240 aaPredicted RBP7.69□□□□□ -1.18
GYPB-208ENST00000507009 GPTP24298 496 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 ALDH1B1P30837 517 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 U2AF1Q01081 240 aaKnown RBP eCLIP7.69□□□□□ -1.18
GYPB-208ENST00000507009 MAP2K1Q02750 393 aaPredicted RBP7.69□□□□□ -1.18
GYPB-208ENST00000507009 NBPF10Q6P3W6 841 aaKnown RBP7.69□□□□□ -1.18
GYPB-208ENST00000507009 CLEC4GQ6UXB4 293 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 GPC2Q8N158 579 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 LARGE2Q8N3Y3 721 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 NBPF15Q8N660 670 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 RPGRQ92834 1020 aaKnown RBP7.69□□□□□ -1.18
GYPB-208ENST00000507009 CAPNS2Q96L46 248 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 CFAP53Q96M91 514 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 ZNF408Q9H9D4 720 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 MIS18AQ9NYP9 233 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 CLSPNQ9HAW4 1339 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 ABCC12Q96J65 1359 aa7.69□□□□□ -1.18
GYPB-208ENST00000507009 FZD9O00144 591 aa7.68□□□□□ -1.18
GYPB-208ENST00000507009 AOC2O75106 756 aa7.68□□□□□ -1.18
GYPB-208ENST00000507009 MYL6BP14649 208 aa7.68□□□□□ -1.18
GYPB-208ENST00000507009 EPS15P42566 896 aa7.68□□□□□ -1.18
GYPB-208ENST00000507009 CDAN1Q8IWY9 1227 aa7.68□□□□□ -1.18
GYPB-208ENST00000507009 DDX21Q9NR30 783 aaKnown RBP eCLIP7.68□□□□□ -1.18
GYPB-208ENST00000507009 RRP7AQ9Y3A4 280 aaKnown RBP7.68□□□□□ -1.18
GYPB-208ENST00000507009 CEMIPQ8WUJ3 1361 aa7.68□□□□□ -1.18
GYPB-208ENST00000507009 COL4A5P29400 1685 aa7.67□□□□□ -1.18
GYPB-208ENST00000507009 LTBP1Q14766 1721 aa7.67□□□□□ -1.18
GYPB-208ENST00000507009 TRPM7Q96QT4 1865 aa7.67□□□□□ -1.18
GYPB-208ENST00000507009 SNPHO15079 494 aa7.67□□□□□ -1.18
GYPB-208ENST00000507009 PER1O15534 1290 aaPredicted RBP7.67□□□□□ -1.18
GYPB-208ENST00000507009 ECE1P42892 770 aa7.67□□□□□ -1.18
GYPB-208ENST00000507009 KIF6Q6ZMV9 814 aa7.67□□□□□ -1.18
GYPB-208ENST00000507009 NIM1KQ8IY84 436 aa7.67□□□□□ -1.18
GYPB-208ENST00000507009 GPR101Q96P66 508 aaPredicted RBP7.67□□□□□ -1.18
GYPB-208ENST00000507009 NYXQ9GZU5 481 aa7.67□□□□□ -1.18
GYPB-208ENST00000507009 RSPH6AQ9H0K4 717 aa7.67□□□□□ -1.18
GYPB-208ENST00000507009 ZBTB3Q9H5J0 574 aa7.67□□□□□ -1.18
GYPB-208ENST00000507009 NUDCQ9Y266 331 aa7.67□□□□□ -1.18
GYPB-208ENST00000507009 NUP98P52948 1817 aa7.66□□□□□ -1.18
GYPB-208ENST00000507009 KLRG2A4D1S0 409 aaPredicted RBP7.66□□□□□ -1.18
GYPB-208ENST00000507009 PPEF1O14829 653 aaPredicted RBP7.66□□□□□ -1.18
GYPB-208ENST00000507009 PPIP5K2O43314 1243 aa7.66□□□□□ -1.18
GYPB-208ENST00000507009 MLLT1Q03111 559 aaPredicted RBP7.66□□□□□ -1.18
GYPB-208ENST00000507009 AOC3Q16853 763 aa7.66□□□□□ -1.18
GYPB-208ENST00000507009 TTLL7Q6ZT98 887 aa7.66□□□□□ -1.18
GYPB-208ENST00000507009 PSMD1Q99460 953 aa7.66□□□□□ -1.18
GYPB-208ENST00000507009 TMX4Q9H1E5 349 aaPredicted RBP7.66□□□□□ -1.18
GYPB-208ENST00000507009 LAMB4A4D0S4 1761 aa7.66□□□□□ -1.18
GYPB-208ENST00000507009 CELF2O95319 508 aaKnown RBP7.65□□□□□ -1.18
GYPB-208ENST00000507009 SCNN1DP51172 638 aa7.65□□□□□ -1.18
GYPB-208ENST00000507009 TAF7Q15545 349 aaPredicted RBP7.65□□□□□ -1.18
GYPB-208ENST00000507009 SUSD4Q5VX71 490 aa7.65□□□□□ -1.18
GYPB-208ENST00000507009 CST9Q5W186 159 aa7.65□□□□□ -1.18
GYPB-208ENST00000507009 ZNF428Q96B54 188 aa7.65□□□□□ -1.18
GYPB-208ENST00000507009 RBM17Q96I25 401 aaKnown RBP7.65□□□□□ -1.18
GYPB-208ENST00000507009 MAP3K15Q6ZN16 1313 aa7.64□□□□□ -1.19
GYPB-208ENST00000507009 G3V3G9 751 aa7.64□□□□□ -1.19
GYPB-208ENST00000507009 SLC34A2O95436 690 aa7.64□□□□□ -1.19
GYPB-208ENST00000507009 NEFMP07197 916 aa7.64□□□□□ -1.19
GYPB-208ENST00000507009 USP50Q70EL3 339 aaPredicted RBP7.64□□□□□ -1.19
GYPB-208ENST00000507009 THUMPD2Q9BTF0 503 aaKnown RBP7.64□□□□□ -1.19
GYPB-208ENST00000507009 BCL2L13Q9BXK5 485 aa7.64□□□□□ -1.19
GYPB-208ENST00000507009 GLIS2Q9BZE0 524 aaPredicted RBP7.64□□□□□ -1.19
GYPB-208ENST00000507009 TLL2Q9Y6L7 1015 aa7.64□□□□□ -1.19
GYPB-208ENST00000507009 CASP8AP2Q9UKL3 1982 aa7.64□□□□□ -1.19
GYPB-208ENST00000507009 NPC1L1Q9UHC9 1359 aa7.63□□□□□ -1.19
GYPB-208ENST00000507009 UBN2Q6ZU65 1347 aa7.63□□□□□ -1.19
GYPB-208ENST00000507009 DLG5Q8TDM6 1919 aa7.63□□□□□ -1.19
GYPB-208ENST00000507009 RAD17O75943 681 aa7.63□□□□□ -1.19
GYPB-208ENST00000507009 GMPSP49915 693 aaPredicted RBP7.63□□□□□ -1.19
GYPB-208ENST00000507009 DGKZQ13574 1117 aa7.63□□□□□ -1.19
GYPB-208ENST00000507009 CRY2Q49AN0 593 aa7.63□□□□□ -1.19
GYPB-208ENST00000507009 CC2D2BQ6DHV5 1058 aa7.63□□□□□ -1.19
GYPB-208ENST00000507009 EFCAB3Q8N7B9 438 aa7.63□□□□□ -1.19
GYPB-208ENST00000507009 TMEM121BQ9BXQ6 578 aaPredicted RBP7.63□□□□□ -1.19
GYPB-208ENST00000507009 MCOLN1Q9GZU1 580 aa7.63□□□□□ -1.19
GYPB-208ENST00000507009 ADARB2Q9NS39 739 aaKnown RBP7.63□□□□□ -1.19
GYPB-208ENST00000507009 GPRC5DQ9NZD1 345 aa7.63□□□□□ -1.19
GYPB-208ENST00000507009 THSD7BQ9C0I4 1608 aa7.63□□□□□ -1.19
GYPB-208ENST00000507009 SNED1Q8TER0 1413 aa7.62□□□□□ -1.19
GYPB-208ENST00000507009 KDM3BQ7LBC6 1761 aa7.62□□□□□ -1.19
GYPB-208ENST00000507009 ERVV-1B6SEH8 477 aa7.62□□□□□ -1.19
GYPB-208ENST00000507009 NTSR2O95665 410 aa7.62□□□□□ -1.19
GYPB-208ENST00000507009 EIF2S2P20042 333 aaKnown RBP7.62□□□□□ -1.19
GYPB-208ENST00000507009 PPP2R1AP30153 589 aa7.62□□□□□ -1.19
GYPB-208ENST00000507009 CIAPIN1Q6FI81 312 aa7.62□□□□□ -1.19
GYPB-208ENST00000507009 DLK2Q6UY11 383 aa7.62□□□□□ -1.19
GYPB-208ENST00000507009 DPP8Q6V1X1 898 aaPredicted RBP7.62□□□□□ -1.19
GYPB-208ENST00000507009 PPP1R42Q7Z4L9 355 aa7.62□□□□□ -1.19
GYPB-208ENST00000507009 NECTIN2Q92692 538 aa7.62□□□□□ -1.19
GYPB-208ENST00000507009 NLRP3Q96P20 1036 aa7.62□□□□□ -1.19
GYPB-208ENST00000507009 CRAMP1Q96RY5 1269 aa7.62□□□□□ -1.19
GYPB-208ENST00000507009 BOLA1Q9Y3E2 137 aa7.62□□□□□ -1.19
GYPB-208ENST00000507009 ABCC4O15439 1325 aa7.61□□□□□ -1.19
GYPB-208ENST00000507009 SHTN1A0MZ66 631 aa7.61□□□□□ -1.19
GYPB-208ENST00000507009 ANXA1P04083 346 aa7.61□□□□□ -1.19
GYPB-208ENST00000507009 HCLS1P14317 486 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms