RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 XKR5Q6UX68 686 aa7.58□□□□□ -1.2
HERC6-207ENST00000506842 C11orf16Q9NQ32 467 aa7.58□□□□□ -1.2
HERC6-207ENST00000506842 IGSF5Q9NSI5 407 aa7.58□□□□□ -1.2
HERC6-207ENST00000506842 RTCBQ9Y3I0 505 aaKnown RBP7.58□□□□□ -1.2
HERC6-207ENST00000506842 SLC35F4A4IF30 521 aa7.57□□□□□ -1.2
HERC6-207ENST00000506842 THBS1P07996 1170 aa7.57□□□□□ -1.2
HERC6-207ENST00000506842 FGD1P98174 961 aa7.57□□□□□ -1.2
HERC6-207ENST00000506842 TRIP4Q15650 581 aaPredicted RBP7.57□□□□□ -1.2
HERC6-207ENST00000506842 PGBD3Q8N328 593 aa7.57□□□□□ -1.2
HERC6-207ENST00000506842 PRPF40AO75400 957 aaKnown RBP7.56□□□□□ -1.2
HERC6-207ENST00000506842 EGFRP00533 1210 aa7.56□□□□□ -1.2
HERC6-207ENST00000506842 LDHBP07195 334 aaKnown RBP7.56□□□□□ -1.2
HERC6-207ENST00000506842 MAPK8P45983 427 aa7.56□□□□□ -1.2
HERC6-207ENST00000506842 KCNQ4P56696 695 aa7.56□□□□□ -1.2
HERC6-207ENST00000506842 PTSQ03393 145 aa7.56□□□□□ -1.2
HERC6-207ENST00000506842 C8orf34Q49A92 452 aa7.56□□□□□ -1.2
HERC6-207ENST00000506842 PDE12Q6L8Q7 609 aaKnown RBP7.56□□□□□ -1.2
HERC6-207ENST00000506842 CEP63Q96MT8 703 aa7.56□□□□□ -1.2
HERC6-207ENST00000506842 GAS2L1Q99501 681 aaPredicted RBP7.56□□□□□ -1.2
HERC6-207ENST00000506842 USP20Q9Y2K6 914 aa7.56□□□□□ -1.2
HERC6-207ENST00000506842 GJA3Q9Y6H8 435 aa7.56□□□□□ -1.2
HERC6-207ENST00000506842 CUL7Q14999 1698 aa7.55□□□□□ -1.2
HERC6-207ENST00000506842 A6NHS1 94 aa7.55□□□□□ -1.2
HERC6-207ENST00000506842 SOBPA7XYQ1 873 aa7.55□□□□□ -1.2
HERC6-207ENST00000506842 EFSO43281 561 aa7.55□□□□□ -1.2
HERC6-207ENST00000506842 NEFLP07196 543 aa7.55□□□□□ -1.2
HERC6-207ENST00000506842 FAM157BP0CG42 384 aa7.55□□□□□ -1.2
HERC6-207ENST00000506842 EPB42P16452 691 aa7.55□□□□□ -1.2
HERC6-207ENST00000506842 UBAP2LQ14157 1087 aaKnown RBP7.55□□□□□ -1.2
HERC6-207ENST00000506842 EFHC2Q5JST6 749 aa7.55□□□□□ -1.2
HERC6-207ENST00000506842 KIFC2Q96AC6 838 aa7.55□□□□□ -1.2
HERC6-207ENST00000506842 CSRNP1Q96S65 589 aa7.55□□□□□ -1.2
HERC6-207ENST00000506842 SENP2Q9HC62 589 aa7.55□□□□□ -1.2
HERC6-207ENST00000506842 FNDC3AQ9Y2H6 1198 aaKnown RBP7.55□□□□□ -1.2
HERC6-207ENST00000506842 PNMA6FA0A0J9YX94 578 aa7.54□□□□□ -1.2
HERC6-207ENST00000506842 ORC1Q13415 861 aa7.54□□□□□ -1.2
HERC6-207ENST00000506842 MRPL58Q14197 206 aaKnown RBP7.54□□□□□ -1.2
HERC6-207ENST00000506842 CMTR1Q8N1G2 835 aaKnown RBP7.54□□□□□ -1.2
HERC6-207ENST00000506842 TTC16Q8NEE8 873 aa7.54□□□□□ -1.2
HERC6-207ENST00000506842 TRIM47Q96LD4 638 aa7.54□□□□□ -1.2
HERC6-207ENST00000506842 CFHR5Q9BXR6 569 aa7.54□□□□□ -1.2
HERC6-207ENST00000506842 ZCCHC2Q9C0B9 1178 aaKnown RBP7.54□□□□□ -1.2
HERC6-207ENST00000506842 DNAJC25Q9H1X3 360 aa7.54□□□□□ -1.2
HERC6-207ENST00000506842 BRD7Q9NPI1 651 aa7.54□□□□□ -1.2
HERC6-207ENST00000506842 WWC3Q9ULE0 1092 aa7.54□□□□□ -1.2
HERC6-207ENST00000506842 UBAP1LF5GYI3 381 aa7.53□□□□□ -1.2
HERC6-207ENST00000506842 EIF1AYO14602 144 aaKnown RBP7.53□□□□□ -1.2
HERC6-207ENST00000506842 TNFRSF21O75509 655 aa7.53□□□□□ -1.2
HERC6-207ENST00000506842 ATP2B2Q01814 1243 aa7.53□□□□□ -1.2
HERC6-207ENST00000506842 ALG1LQ6GMV1 187 aa7.53□□□□□ -1.2
HERC6-207ENST00000506842 FIGNL1Q6PIW4 674 aa7.53□□□□□ -1.2
HERC6-207ENST00000506842 FBF1Q8TES7 1133 aa7.53□□□□□ -1.2
HERC6-207ENST00000506842 SETDB2Q96T68 719 aa7.53□□□□□ -1.2
HERC6-207ENST00000506842 PCDHGC4Q9Y5F7 938 aa7.53□□□□□ -1.2
HERC6-207ENST00000506842 ATXN7O15265 892 aaPredicted RBP7.52□□□□□ -1.21
HERC6-207ENST00000506842 TRIM22Q8IYM9 498 aa7.52□□□□□ -1.21
HERC6-207ENST00000506842 SNX29Q8TEQ0 813 aa7.52□□□□□ -1.21
HERC6-207ENST00000506842 DUSP9Q99956 384 aaKnown RBP7.52□□□□□ -1.21
HERC6-207ENST00000506842 IRX2Q9BZI1 471 aaPredicted RBP7.52□□□□□ -1.21
HERC6-207ENST00000506842 ELP3Q9H9T3 547 aa7.52□□□□□ -1.21
HERC6-207ENST00000506842 NDFIP2Q9NV92 336 aa7.52□□□□□ -1.21
HERC6-207ENST00000506842 CUEDC1Q9NWM3 386 aaPredicted RBP7.52□□□□□ -1.21
HERC6-207ENST00000506842 PARP2Q9UGN5 583 aa7.52□□□□□ -1.21
HERC6-207ENST00000506842 RUSC2Q8N2Y8 1516 aa7.52□□□□□ -1.21
HERC6-207ENST00000506842 RAPGEF2Q9Y4G8 1499 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 H7C1W4 665 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 CPNE3O75131 537 aaKnown RBP7.51□□□□□ -1.21
HERC6-207ENST00000506842 XYLBO75191 536 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 RECKO95980 971 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 DAB2P98082 770 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 TNP2Q05952 138 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 LAMC2Q13753 1193 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 DBN1Q16643 649 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 RIPOR1Q6ZS17 1223 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 TMC4Q7Z404 712 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 ZNF438Q7Z4V0 828 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 CCDC155Q8N6L0 562 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 GMCL1Q96IK5 515 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 NUCKS1Q9H1E3 243 aaKnown RBP7.51□□□□□ -1.21
HERC6-207ENST00000506842 FOXD3Q9UJU5 478 aaPredicted RBP7.51□□□□□ -1.21
HERC6-207ENST00000506842 KCNH4Q9UQ05 1017 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 PTPRGP23470 1445 aa7.51□□□□□ -1.21
HERC6-207ENST00000506842 SFSWAPQ12872 951 aaKnown RBP7.5□□□□□ -1.21
HERC6-207ENST00000506842 BCL11AQ9H165 835 aa7.5□□□□□ -1.21
HERC6-207ENST00000506842 ZFYVE28Q9HCC9 887 aa7.5□□□□□ -1.21
HERC6-207ENST00000506842 RNF19AQ9NV58 838 aa7.5□□□□□ -1.21
HERC6-207ENST00000506842 TMEM63CQ9P1W3 806 aa7.5□□□□□ -1.21
HERC6-207ENST00000506842 GMPR2Q9P2T1 348 aaKnown RBP7.5□□□□□ -1.21
HERC6-207ENST00000506842 HCN2Q9UL51 889 aa7.5□□□□□ -1.21
HERC6-207ENST00000506842 CARMIL2Q6F5E8 1435 aa7.5□□□□□ -1.21
HERC6-207ENST00000506842 TNIKQ9UKE5 1360 aa7.49□□□□□ -1.21
HERC6-207ENST00000506842 NLRP13Q86W25 1043 aa7.49□□□□□ -1.21
HERC6-207ENST00000506842 CHRDQ9H2X0 955 aa7.49□□□□□ -1.21
HERC6-207ENST00000506842 BNIP3LO60238 219 aa7.48□□□□□ -1.21
HERC6-207ENST00000506842 MAPTP10636 758 aaKnown RBP7.48□□□□□ -1.21
HERC6-207ENST00000506842 ITGA6P23229 1130 aa7.48□□□□□ -1.21
HERC6-207ENST00000506842 GNA15P30679 374 aa7.48□□□□□ -1.21
HERC6-207ENST00000506842 XPCQ01831 940 aaPredicted RBP7.48□□□□□ -1.21
HERC6-207ENST00000506842 LDLRAD1Q5T700 205 aa7.48□□□□□ -1.21
HERC6-207ENST00000506842 USPL1Q5W0Q7 1092 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms