RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 ZC3H15Q8WU90 426 aaKnown RBP13.87□□□□□ -0.19
SNCA-210ENST00000506691 ABT1Q9ULW3 272 aaKnown RBP13.87□□□□□ -0.19
SNCA-210ENST00000506691 TLL2Q9Y6L7 1015 aa13.87□□□□□ -0.19
SNCA-210ENST00000506691 NUP98P52948 1817 aa13.87□□□□□ -0.19
SNCA-210ENST00000506691 CACNA1FO60840 1977 aa13.87□□□□□ -0.19
SNCA-210ENST00000506691 LTBP1Q14766 1721 aa13.87□□□□□ -0.19
SNCA-210ENST00000506691 CAPNS2Q96L46 248 aa13.86□□□□□ -0.19
SNCA-210ENST00000506691 PGAP2Q9UHJ9 254 aa13.86□□□□□ -0.19
SNCA-210ENST00000506691 MAP3K15Q6ZN16 1313 aa13.86□□□□□ -0.19
SNCA-210ENST00000506691 BRPF1P55201 1214 aaPredicted RBP13.85□□□□□ -0.19
SNCA-210ENST00000506691 PDIA6Q15084 440 aa13.85□□□□□ -0.19
SNCA-210ENST00000506691 RPGRQ92834 1020 aaKnown RBP13.85□□□□□ -0.19
SNCA-210ENST00000506691 YTHDC1Q96MU7 727 aaKnown RBP13.85□□□□□ -0.19
SNCA-210ENST00000506691 GPR101Q96P66 508 aaPredicted RBP13.85□□□□□ -0.19
SNCA-210ENST00000506691 ADARB2Q9NS39 739 aaKnown RBP13.85□□□□□ -0.19
SNCA-210ENST00000506691 DDX58O95786 925 aaKnown RBP13.84□□□□□ -0.19
SNCA-210ENST00000506691 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
SNCA-210ENST00000506691 MLLT1Q03111 559 aaPredicted RBP13.84□□□□□ -0.19
SNCA-210ENST00000506691 PARP10Q53GL7 1025 aa13.84□□□□□ -0.19
SNCA-210ENST00000506691 SUPT20HQ8NEM7 779 aa13.84□□□□□ -0.19
SNCA-210ENST00000506691 RBM17Q96I25 401 aaKnown RBP13.84□□□□□ -0.19
SNCA-210ENST00000506691 RTFDC1Q9BY42 306 aaPredicted RBP13.84□□□□□ -0.19
SNCA-210ENST00000506691 TMX4Q9H1E5 349 aaPredicted RBP13.84□□□□□ -0.19
SNCA-210ENST00000506691 CHPF2Q9P2E5 772 aa13.84□□□□□ -0.19
SNCA-210ENST00000506691 COL4A5P29400 1685 aa13.84□□□□□ -0.19
SNCA-210ENST00000506691 ABCC12Q96J65 1359 aa13.83□□□□□ -0.19
SNCA-210ENST00000506691 MYL6BP14649 208 aa13.83□□□□□ -0.2
SNCA-210ENST00000506691 HLFQ16534 295 aa13.83□□□□□ -0.2
SNCA-210ENST00000506691 SLC10A5Q5PT55 438 aa13.83□□□□□ -0.2
SNCA-210ENST00000506691 CST9Q5W186 159 aa13.83□□□□□ -0.2
SNCA-210ENST00000506691 OLFM4Q6UX06 510 aa13.83□□□□□ -0.2
SNCA-210ENST00000506691 KIF6Q6ZMV9 814 aa13.83□□□□□ -0.2
SNCA-210ENST00000506691 LRP10Q7Z4F1 713 aa13.83□□□□□ -0.2
SNCA-210ENST00000506691 SAPCD2Q86UD0 394 aa13.83□□□□□ -0.2
SNCA-210ENST00000506691 NIM1KQ8IY84 436 aa13.83□□□□□ -0.2
SNCA-210ENST00000506691 ZNF34Q8IZ26 560 aa13.83□□□□□ -0.2
SNCA-210ENST00000506691 LARGE2Q8N3Y3 721 aa13.83□□□□□ -0.2
SNCA-210ENST00000506691 GPRC5DQ9NZD1 345 aa13.83□□□□□ -0.2
SNCA-210ENST00000506691 COPS6Q7L5N1 327 aa13.82□□□□□ -0.2
SNCA-210ENST00000506691 NECTIN2Q92692 538 aa13.82□□□□□ -0.2
SNCA-210ENST00000506691 EPS15P42566 896 aa13.81□□□□□ -0.2
SNCA-210ENST00000506691 PIP4K2AP48426 406 aaPredicted RBP13.81□□□□□ -0.2
SNCA-210ENST00000506691 FAM161AQ3B820 660 aa13.81□□□□□ -0.2
SNCA-210ENST00000506691 HSP90AB3PQ58FF7 597 aa13.81□□□□□ -0.2
SNCA-210ENST00000506691 GIGYF2Q6Y7W6 1299 aaKnown RBP13.81□□□□□ -0.2
SNCA-210ENST00000506691 ANKRD13DQ6ZTN6 518 aa13.81□□□□□ -0.2
SNCA-210ENST00000506691 TMC4Q7Z404 712 aa13.81□□□□□ -0.2
SNCA-210ENST00000506691 PPP1R42Q7Z4L9 355 aa13.81□□□□□ -0.2
SNCA-210ENST00000506691 ZNRF3Q9ULT6 936 aa13.81□□□□□ -0.2
SNCA-210ENST00000506691 ATP6V0A2Q9Y487 856 aa13.81□□□□□ -0.2
SNCA-210ENST00000506691 GJA3Q9Y6H8 435 aa13.81□□□□□ -0.2
SNCA-210ENST00000506691 PPEF1O14829 653 aaPredicted RBP13.8□□□□□ -0.2
SNCA-210ENST00000506691 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
SNCA-210ENST00000506691 BBOX1O75936 387 aa13.8□□□□□ -0.2
SNCA-210ENST00000506691 RARSP54136 660 aaKnown RBP13.8□□□□□ -0.2
SNCA-210ENST00000506691 PLBD2Q8NHP8 589 aa13.8□□□□□ -0.2
SNCA-210ENST00000506691 XAGE3Q8WTP9 111 aa13.8□□□□□ -0.2
SNCA-210ENST00000506691 NLRP3Q96P20 1036 aa13.8□□□□□ -0.2
SNCA-210ENST00000506691 PTPRCP08575 1304 aa13.8□□□□□ -0.2
SNCA-210ENST00000506691 ANKRD36CQ5JPF3 1778 aa13.8□□□□□ -0.2
SNCA-210ENST00000506691 NTSR2O95665 410 aa13.79□□□□□ -0.2
SNCA-210ENST00000506691 NOGQ13253 232 aa13.79□□□□□ -0.2
SNCA-210ENST00000506691 PROSER3Q2NL68 480 aa13.79□□□□□ -0.2
SNCA-210ENST00000506691 CYP4F22Q6NT55 531 aa13.79□□□□□ -0.2
SNCA-210ENST00000506691 MRPL50Q8N5N7 158 aaKnown RBP13.79□□□□□ -0.2
SNCA-210ENST00000506691 SSH1Q8WYL5 1049 aa13.79□□□□□ -0.2
SNCA-210ENST00000506691 ARHGAP45Q92619 1136 aa13.79□□□□□ -0.2
SNCA-210ENST00000506691 UBN2Q6ZU65 1347 aa13.79□□□□□ -0.2
SNCA-210ENST00000506691 PPIP5K2O43314 1243 aa13.78□□□□□ -0.2
SNCA-210ENST00000506691 KIAA2012Q0VF49 1180 aa13.78□□□□□ -0.2
SNCA-210ENST00000506691 FLIIQ13045 1269 aa13.78□□□□□ -0.2
SNCA-210ENST00000506691 TNIP1Q15025 636 aa13.78□□□□□ -0.2
SNCA-210ENST00000506691 KSR2Q6VAB6 950 aa13.78□□□□□ -0.2
SNCA-210ENST00000506691 CDC37L1Q7L3B6 337 aa13.78□□□□□ -0.2
SNCA-210ENST00000506691 RIC3Q7Z5B4 369 aa13.78□□□□□ -0.2
SNCA-210ENST00000506691 NUTM1Q86Y26 1132 aa13.78□□□□□ -0.2
SNCA-210ENST00000506691 SP8Q8IXZ3 490 aa13.78□□□□□ -0.2
SNCA-210ENST00000506691 SMC4Q9NTJ3 1288 aa13.78□□□□□ -0.2
SNCA-210ENST00000506691 SAGE1Q9NXZ1 904 aa13.78□□□□□ -0.2
SNCA-210ENST00000506691 KIF16BQ96L93 1317 aa13.78□□□□□ -0.2
SNCA-210ENST00000506691 ANXA1P04083 346 aa13.77□□□□□ -0.21
SNCA-210ENST00000506691 CXCL9Q07325 125 aa13.77□□□□□ -0.21
SNCA-210ENST00000506691 AIMP1Q12904 312 aaKnown RBP13.77□□□□□ -0.21
SNCA-210ENST00000506691 SUSD4Q5VX71 490 aa13.77□□□□□ -0.21
SNCA-210ENST00000506691 TTLL7Q6ZT98 887 aa13.77□□□□□ -0.21
SNCA-210ENST00000506691 PHAXQ9H814 394 aaKnown RBP13.77□□□□□ -0.21
SNCA-210ENST00000506691 CCDC85CA6NKD9 419 aa13.76□□□□□ -0.21
SNCA-210ENST00000506691 FAM177BA6PVY3 158 aa13.76□□□□□ -0.21
SNCA-210ENST00000506691 TRIM28Q13263 835 aaKnown RBP13.76□□□□□ -0.21
SNCA-210ENST00000506691 FKBP5Q13451 457 aaPredicted RBP13.76□□□□□ -0.21
SNCA-210ENST00000506691 TCIRG1Q13488 830 aa13.76□□□□□ -0.21
SNCA-210ENST00000506691 CIAPIN1Q6FI81 312 aa13.76□□□□□ -0.21
SNCA-210ENST00000506691 DPF2Q92785 391 aa13.76□□□□□ -0.21
SNCA-210ENST00000506691 RCAN3Q9UKA8 241 aa13.76□□□□□ -0.21
SNCA-210ENST00000506691 LRRC37AA6NMS7 1700 aa13.76□□□□□ -0.21
SNCA-210ENST00000506691 PI4KAP2A4QPH2 592 aa13.75□□□□□ -0.21
SNCA-210ENST00000506691 CELF2O95319 508 aaKnown RBP13.75□□□□□ -0.21
SNCA-210ENST00000506691 MS4A1P11836 297 aa13.75□□□□□ -0.21
SNCA-210ENST00000506691 NEXNQ0ZGT2 675 aa13.75□□□□□ -0.21
SNCA-210ENST00000506691 PAXIP1Q6ZW49 1069 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms