RNA–Protein interactions for RNA: ENST00000506466.5

ATXN3-209, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-209ENST00000506466 DNAJB12Q9NXW2 375 aaKnown RBP8.09□□□□□ -1.11
ATXN3-209ENST00000506466 STIM2Q9P246 746 aa8.09□□□□□ -1.11
ATXN3-209ENST00000506466 NAGPAQ9UK23 515 aa8.09□□□□□ -1.11
ATXN3-209ENST00000506466 TIMELESSQ9UNS1 1208 aa8.09□□□□□ -1.11
ATXN3-209ENST00000506466 ZBTB39O15060 712 aa8.08□□□□□ -1.12
ATXN3-209ENST00000506466 IGHA1P01876 353 aa8.08□□□□□ -1.12
ATXN3-209ENST00000506466 SCNN1AP37088 669 aa8.08□□□□□ -1.12
ATXN3-209ENST00000506466 TRIP4Q15650 581 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-209ENST00000506466 UBE2OQ9C0C9 1292 aaKnown RBP8.08□□□□□ -1.12
ATXN3-209ENST00000506466 NOP53Q9NZM5 478 aaKnown RBP8.08□□□□□ -1.12
ATXN3-209ENST00000506466 SASH3O75995 380 aa8.07□□□□□ -1.12
ATXN3-209ENST00000506466 PROCP04070 461 aa8.07□□□□□ -1.12
ATXN3-209ENST00000506466 HOXD8P13378 290 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-209ENST00000506466 DHX32Q7L7V1 743 aaKnown RBP8.07□□□□□ -1.12
ATXN3-209ENST00000506466 RGL4Q8IZJ4 473 aa8.07□□□□□ -1.12
ATXN3-209ENST00000506466 PNMA5Q96PV4 448 aa8.07□□□□□ -1.12
ATXN3-209ENST00000506466 PLVAPQ9BX97 442 aa8.07□□□□□ -1.12
ATXN3-209ENST00000506466 CARNS1A5YM72 827 aa8.06□□□□□ -1.12
ATXN3-209ENST00000506466 XYLBO75191 536 aa8.06□□□□□ -1.12
ATXN3-209ENST00000506466 ZAP70P43403 619 aa8.05□□□□□ -1.12
ATXN3-209ENST00000506466 GPLD1P80108 840 aa8.05□□□□□ -1.12
ATXN3-209ENST00000506466 GPAT2Q6NUI2 795 aa8.05□□□□□ -1.12
ATXN3-209ENST00000506466 KRT25Q7Z3Z0 450 aa8.05□□□□□ -1.12
ATXN3-209ENST00000506466 CMTR1Q8N1G2 835 aaKnown RBP8.05□□□□□ -1.12
ATXN3-209ENST00000506466 HELQQ8TDG4 1101 aa8.05□□□□□ -1.12
ATXN3-209ENST00000506466 LPIN3Q9BQK8 851 aa8.05□□□□□ -1.12
ATXN3-209ENST00000506466 TLR7Q9NYK1 1049 aaKnown RBP8.05□□□□□ -1.12
ATXN3-209ENST00000506466 RARAP10276 462 aa8.04□□□□□ -1.12
ATXN3-209ENST00000506466 NRLP54845 237 aa8.04□□□□□ -1.12
ATXN3-209ENST00000506466 GRIK5Q16478 980 aa8.04□□□□□ -1.12
ATXN3-209ENST00000506466 PCSK7Q16549 785 aa8.04□□□□□ -1.12
ATXN3-209ENST00000506466 SPOCK3Q9BQ16 436 aa8.04□□□□□ -1.12
ATXN3-209ENST00000506466 FRRS1LQ9P0K9 344 aa8.04□□□□□ -1.12
ATXN3-209ENST00000506466 USTQ9Y2C2 406 aa8.04□□□□□ -1.12
ATXN3-209ENST00000506466 LILRB5O75023 590 aa8.03□□□□□ -1.12
ATXN3-209ENST00000506466 NPR3P17342 541 aa8.03□□□□□ -1.12
ATXN3-209ENST00000506466 SOX18P35713 384 aa8.03□□□□□ -1.12
ATXN3-209ENST00000506466 AFF1P51825 1210 aaKnown RBP8.03□□□□□ -1.12
ATXN3-209ENST00000506466 PSAPL1Q6NUJ1 521 aa8.03□□□□□ -1.12
ATXN3-209ENST00000506466 ABTB2Q8N961 1025 aa8.03□□□□□ -1.12
ATXN3-209ENST00000506466 TTC9Q92623 222 aa8.03□□□□□ -1.12
ATXN3-209ENST00000506466 IGFLR1Q9H665 355 aa8.03□□□□□ -1.12
ATXN3-209ENST00000506466 FAM13BQ9NYF5 915 aa8.03□□□□□ -1.12
ATXN3-209ENST00000506466 SUPT5HO00267 1087 aaKnown RBP8.02□□□□□ -1.13
ATXN3-209ENST00000506466 MMP20O60882 483 aa8.02□□□□□ -1.13
ATXN3-209ENST00000506466 SPATA31C1P0DKV0 1188 aa8.02□□□□□ -1.13
ATXN3-209ENST00000506466 CD163Q86VB7 1156 aa8.02□□□□□ -1.13
ATXN3-209ENST00000506466 PIK3R5Q8WYR1 880 aa8.02□□□□□ -1.13
ATXN3-209ENST00000506466 CCDC180Q9P1Z9 1646 aa8.02□□□□□ -1.13
ATXN3-209ENST00000506466 C1QTNF9BB2RNN3 333 aa8.01□□□□□ -1.13
ATXN3-209ENST00000506466 CHRNA4P43681 627 aa8.01□□□□□ -1.13
ATXN3-209ENST00000506466 TBC1D8BQ0IIM8 1120 aa8.01□□□□□ -1.13
ATXN3-209ENST00000506466 PERM1Q5SV97 790 aa8.01□□□□□ -1.13
ATXN3-209ENST00000506466 FAM35AQ86V20 835 aa8.01□□□□□ -1.13
ATXN3-209ENST00000506466 NLRP13Q86W25 1043 aa8.01□□□□□ -1.13
ATXN3-209ENST00000506466 GTF3C2Q8WUA4 911 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-209ENST00000506466 MSTNO14793 375 aa8□□□□□ -1.13
ATXN3-209ENST00000506466 PLAURQ03405 335 aa8□□□□□ -1.13
ATXN3-209ENST00000506466 GPR152Q8TDT2 470 aa8□□□□□ -1.13
ATXN3-209ENST00000506466 NUDT8Q8WV74 236 aa8□□□□□ -1.13
ATXN3-209ENST00000506466 JPH1Q9HDC5 661 aaPredicted RBP8□□□□□ -1.13
ATXN3-209ENST00000506466 SPDYE3A6NKU9 549 aa7.99□□□□□ -1.13
ATXN3-209ENST00000506466 CPB1P15086 417 aa7.99□□□□□ -1.13
ATXN3-209ENST00000506466 ATCAYQ86WG3 371 aa7.99□□□□□ -1.13
ATXN3-209ENST00000506466 OR13H1Q8NG92 308 aa7.99□□□□□ -1.13
ATXN3-209ENST00000506466 UBAP1LF5GYI3 381 aa7.98□□□□□ -1.13
ATXN3-209ENST00000506466 RGS9O75916 674 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-209ENST00000506466 MLLT1Q03111 559 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-209ENST00000506466 XKR5Q6UX68 686 aa7.98□□□□□ -1.13
ATXN3-209ENST00000506466 A0A0A0MRY4 1105 aa7.97□□□□□ -1.13
ATXN3-209ENST00000506466 LOC102724428A0A0B4J2F2 783 aa7.97□□□□□ -1.13
ATXN3-209ENST00000506466 PSAPP07602 524 aa7.97□□□□□ -1.13
ATXN3-209ENST00000506466 MPSTP25325 297 aa7.97□□□□□ -1.13
ATXN3-209ENST00000506466 EIF1AXP47813 144 aaKnown RBP7.97□□□□□ -1.13
ATXN3-209ENST00000506466 SIK1P57059 783 aa7.97□□□□□ -1.13
ATXN3-209ENST00000506466 PDE12Q6L8Q7 609 aaKnown RBP7.97□□□□□ -1.13
ATXN3-209ENST00000506466 FNDC3AQ9Y2H6 1198 aaKnown RBP7.97□□□□□ -1.13
ATXN3-209ENST00000506466 FAM229AH3BQW9 127 aa7.96□□□□□ -1.14
ATXN3-209ENST00000506466 KIF4AO95239 1232 aa7.96□□□□□ -1.14
ATXN3-209ENST00000506466 ARID4AP29374 1257 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-209ENST00000506466 MTMR3Q13615 1198 aa7.96□□□□□ -1.14
ATXN3-209ENST00000506466 ECM1Q16610 540 aa7.96□□□□□ -1.14
ATXN3-209ENST00000506466 NOM1Q5C9Z4 860 aaKnown RBP7.96□□□□□ -1.14
ATXN3-209ENST00000506466 COL13A1Q5TAT6 717 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-209ENST00000506466 MSL1Q68DK7 614 aa7.96□□□□□ -1.14
ATXN3-209ENST00000506466 HFE2Q6ZVN8 426 aa7.96□□□□□ -1.14
ATXN3-209ENST00000506466 NUDT16Q96DE0 195 aaKnown RBP7.96□□□□□ -1.14
ATXN3-209ENST00000506466 J3QW42 95 aa7.95□□□□□ -1.14
ATXN3-209ENST00000506466 PDGFAP04085 211 aa7.95□□□□□ -1.14
ATXN3-209ENST00000506466 BAG6P46379 1132 aa7.95□□□□□ -1.14
ATXN3-209ENST00000506466 TRIM28Q13263 835 aaKnown RBP7.95□□□□□ -1.14
ATXN3-209ENST00000506466 PRRT3Q5FWE3 981 aa7.95□□□□□ -1.14
ATXN3-209ENST00000506466 GGNBP2Q9H3C7 697 aa7.95□□□□□ -1.14
ATXN3-209ENST00000506466 MZF1P28698 734 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-209ENST00000506466 FKBP4Q02790 459 aaKnown RBP eCLIP7.94□□□□□ -1.14
ATXN3-209ENST00000506466 SF3B2Q13435 895 aaKnown RBP7.94□□□□□ -1.14
ATXN3-209ENST00000506466 TRAPPC3LQ5T215 181 aa7.94□□□□□ -1.14
ATXN3-209ENST00000506466 ELMSAN1Q6PJG2 1045 aa7.94□□□□□ -1.14
ATXN3-209ENST00000506466 FMR1NBQ8N0W7 255 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-209ENST00000506466 EDEM1Q92611 657 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms