RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 PCSK7Q16549 785 aa12.5□□□□□ -0.41
RETREG1-203ENST00000506441 EAPPQ56P03 285 aaPredicted RBP12.5□□□□□ -0.41
RETREG1-203ENST00000506441 ZNF326Q5BKZ1 582 aaKnown RBP12.5□□□□□ -0.41
RETREG1-203ENST00000506441 ABI2Q9NYB9 513 aaPredicted RBP12.5□□□□□ -0.41
RETREG1-203ENST00000506441 RARAP10276 462 aa12.49□□□□□ -0.41
RETREG1-203ENST00000506441 MAP2K3P46734 347 aa12.49□□□□□ -0.41
RETREG1-203ENST00000506441 SNX29Q8TEQ0 813 aa12.49□□□□□ -0.41
RETREG1-203ENST00000506441 DNAJC25Q9H1X3 360 aa12.49□□□□□ -0.41
RETREG1-203ENST00000506441 SASH3O75995 380 aa12.48□□□□□ -0.41
RETREG1-203ENST00000506441 VEGFBP49765 207 aa12.48□□□□□ -0.41
RETREG1-203ENST00000506441 BHMTQ93088 406 aa12.48□□□□□ -0.41
RETREG1-203ENST00000506441 AVENQ9NQS1 362 aaPredicted RBP12.48□□□□□ -0.41
RETREG1-203ENST00000506441 PHACTR2O75167 634 aa12.47□□□□□ -0.41
RETREG1-203ENST00000506441 PSAPP07602 524 aa12.47□□□□□ -0.41
RETREG1-203ENST00000506441 MAPK8P45983 427 aa12.47□□□□□ -0.41
RETREG1-203ENST00000506441 KRT25Q7Z3Z0 450 aa12.47□□□□□ -0.41
RETREG1-203ENST00000506441 BCL2L13Q9BXK5 485 aa12.47□□□□□ -0.41
RETREG1-203ENST00000506441 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
RETREG1-203ENST00000506441 MBIPQ9NS73 344 aa12.47□□□□□ -0.41
RETREG1-203ENST00000506441 PHF20L1A8MW92 1017 aa12.46□□□□□ -0.41
RETREG1-203ENST00000506441 CPNE3O75131 537 aaKnown RBP12.46□□□□□ -0.41
RETREG1-203ENST00000506441 MAP3K6O95382 1288 aa12.46□□□□□ -0.41
RETREG1-203ENST00000506441 VSIG8P0DPA2 414 aa12.46□□□□□ -0.41
RETREG1-203ENST00000506441 CTBSQ01459 385 aa12.46□□□□□ -0.41
RETREG1-203ENST00000506441 TRIP4Q15650 581 aaPredicted RBP12.46□□□□□ -0.41
RETREG1-203ENST00000506441 TNFRSF21O75509 655 aa12.45□□□□□ -0.42
RETREG1-203ENST00000506441 TARSP26639 723 aaKnown RBP12.45□□□□□ -0.42
RETREG1-203ENST00000506441 NPAS4Q8IUM7 802 aa12.45□□□□□ -0.42
RETREG1-203ENST00000506441 EIF4G1Q04637 1599 aaKnown RBP12.44□□□□□ -0.42
RETREG1-203ENST00000506441 GPR182O15218 404 aa12.44□□□□□ -0.42
RETREG1-203ENST00000506441 NFKB1P19838 968 aa12.44□□□□□ -0.42
RETREG1-203ENST00000506441 DSC3Q14574 896 aa12.44□□□□□ -0.42
RETREG1-203ENST00000506441 ALG1LQ6GMV1 187 aa12.44□□□□□ -0.42
RETREG1-203ENST00000506441 CSRNP1Q96S65 589 aa12.44□□□□□ -0.42
RETREG1-203ENST00000506441 CES1P23141 567 aa12.43□□□□□ -0.42
RETREG1-203ENST00000506441 GRNP28799 593 aaKnown RBP12.43□□□□□ -0.42
RETREG1-203ENST00000506441 FMR1Q06787 632 aaKnown RBP eCLIP12.43□□□□□ -0.42
RETREG1-203ENST00000506441 SLC30A3Q99726 388 aa12.43□□□□□ -0.42
RETREG1-203ENST00000506441 A6NHS1 94 aa12.42□□□□□ -0.42
RETREG1-203ENST00000506441 PLAURQ03405 335 aa12.42□□□□□ -0.42
RETREG1-203ENST00000506441 ZNF468Q5VIY5 522 aaPredicted RBP12.42□□□□□ -0.42
RETREG1-203ENST00000506441 SPACA7Q96KW9 195 aa12.42□□□□□ -0.42
RETREG1-203ENST00000506441 TLR7Q9NYK1 1049 aaKnown RBP12.42□□□□□ -0.42
RETREG1-203ENST00000506441 SIN3BO75182 1162 aa12.41□□□□□ -0.42
RETREG1-203ENST00000506441 ARAFP10398 606 aa12.41□□□□□ -0.42
RETREG1-203ENST00000506441 ADH6P28332 368 aa12.41□□□□□ -0.42
RETREG1-203ENST00000506441 SOX18P35713 384 aa12.41□□□□□ -0.42
RETREG1-203ENST00000506441 NFX1Q12986 1120 aaKnown RBP12.41□□□□□ -0.42
RETREG1-203ENST00000506441 COL25A1Q9BXS0 654 aaPredicted RBP12.41□□□□□ -0.42
RETREG1-203ENST00000506441 ZFYVE28Q9HCC9 887 aa12.41□□□□□ -0.42
RETREG1-203ENST00000506441 TMEM63CQ9P1W3 806 aa12.41□□□□□ -0.42
RETREG1-203ENST00000506441 EIF1AYO14602 144 aaKnown RBP12.4□□□□□ -0.42
RETREG1-203ENST00000506441 HYAL2Q12891 473 aa12.4□□□□□ -0.42
RETREG1-203ENST00000506441 SYT9Q86SS6 491 aa12.4□□□□□ -0.42
RETREG1-203ENST00000506441 OR13H1Q8NG92 308 aa12.4□□□□□ -0.42
RETREG1-203ENST00000506441 FBF1Q8TES7 1133 aa12.4□□□□□ -0.42
RETREG1-203ENST00000506441 RBSNQ9H1K0 784 aa12.4□□□□□ -0.42
RETREG1-203ENST00000506441 MMP20O60882 483 aa12.39□□□□□ -0.43
RETREG1-203ENST00000506441 IGHA2P01877 340 aa12.39□□□□□ -0.43
RETREG1-203ENST00000506441 LDHBP07195 334 aaKnown RBP12.39□□□□□ -0.43
RETREG1-203ENST00000506441 DHX32Q7L7V1 743 aaKnown RBP12.39□□□□□ -0.43
RETREG1-203ENST00000506441 GPR161Q8N6U8 529 aaKnown RBP12.39□□□□□ -0.43
RETREG1-203ENST00000506441 GDF2Q9UK05 429 aaPredicted RBP12.39□□□□□ -0.43
RETREG1-203ENST00000506441 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
RETREG1-203ENST00000506441 PNMA6FA0A0J9YX94 578 aa12.38□□□□□ -0.43
RETREG1-203ENST00000506441 RBM47A0AV96 593 aaKnown RBP12.38□□□□□ -0.43
RETREG1-203ENST00000506441 P4HBP07237 508 aaKnown RBP12.38□□□□□ -0.43
RETREG1-203ENST00000506441 EDN3P14138 238 aa12.38□□□□□ -0.43
RETREG1-203ENST00000506441 NRLP54845 237 aa12.38□□□□□ -0.43
RETREG1-203ENST00000506441 XPCQ01831 940 aaPredicted RBP12.38□□□□□ -0.43
RETREG1-203ENST00000506441 SRSF11Q05519 484 aaKnown RBP12.38□□□□□ -0.43
RETREG1-203ENST00000506441 ENOX2Q16206 610 aaKnown RBP12.38□□□□□ -0.43
RETREG1-203ENST00000506441 GOLGA6L1Q8N7Z2 621 aa12.38□□□□□ -0.43
RETREG1-203ENST00000506441 GIPC2Q8TF65 315 aa12.38□□□□□ -0.43
RETREG1-203ENST00000506441 FOXD4L4Q8WXT5 416 aaPredicted RBP12.38□□□□□ -0.43
RETREG1-203ENST00000506441 FRMD6Q96NE9 622 aa12.38□□□□□ -0.43
RETREG1-203ENST00000506441 UBE2OQ9C0C9 1292 aaKnown RBP12.38□□□□□ -0.43
RETREG1-203ENST00000506441 IGFLR1Q9H665 355 aa12.38□□□□□ -0.43
RETREG1-203ENST00000506441 NLRP2Q9NX02 1062 aa12.38□□□□□ -0.43
RETREG1-203ENST00000506441 PPP4R2Q9NY27 417 aa12.38□□□□□ -0.43
RETREG1-203ENST00000506441 PRPF40AO75400 957 aaKnown RBP12.37□□□□□ -0.43
RETREG1-203ENST00000506441 ALAS2P22557 587 aa12.37□□□□□ -0.43
RETREG1-203ENST00000506441 C1orf127Q8N9H9 656 aa12.37□□□□□ -0.43
RETREG1-203ENST00000506441 FOXD3Q9UJU5 478 aaPredicted RBP12.37□□□□□ -0.43
RETREG1-203ENST00000506441 IGF1RP08069 1367 aa12.36□□□□□ -0.43
RETREG1-203ENST00000506441 ORC1Q13415 861 aa12.36□□□□□ -0.43
RETREG1-203ENST00000506441 GAS6Q14393 721 aa12.36□□□□□ -0.43
RETREG1-203ENST00000506441 RAB44Q7Z6P3 723 aaPredicted RBP12.36□□□□□ -0.43
RETREG1-203ENST00000506441 NCAPG2Q86XI2 1143 aa12.36□□□□□ -0.43
RETREG1-203ENST00000506441 ZFATQ9P243 1243 aa12.36□□□□□ -0.43
RETREG1-203ENST00000506441 CC2D2AQ9P2K1 1620 aa12.36□□□□□ -0.43
RETREG1-203ENST00000506441 C2CD2LO14523 706 aa12.35□□□□□ -0.43
RETREG1-203ENST00000506441 WFS1O76024 890 aa12.35□□□□□ -0.43
RETREG1-203ENST00000506441 PCBP4P57723 403 aaKnown RBP12.35□□□□□ -0.43
RETREG1-203ENST00000506441 TBC1D8BQ0IIM8 1120 aa12.35□□□□□ -0.43
RETREG1-203ENST00000506441 GRIN2CQ14957 1233 aa12.35□□□□□ -0.43
RETREG1-203ENST00000506441 CNTN3Q9P232 1028 aa12.35□□□□□ -0.43
RETREG1-203ENST00000506441 GHRHP01286 108 aa12.34□□□□□ -0.43
RETREG1-203ENST00000506441 GIPC1O14908 333 aa12.33□□□□□ -0.44
RETREG1-203ENST00000506441 HOXD8P13378 290 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms